RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 PCF11O94913 1555 aaKnown RBP4.44□□□□□ -1.7
RAB3IP-206ENST00000481897 SUPT6HQ7KZ85 1726 aaKnown RBP4.43□□□□□ -1.7
RAB3IP-206ENST00000481897 CLIP1P30622 1438 aa4.43□□□□□ -1.7
RAB3IP-206ENST00000481897 VPS8Q8N3P4 1428 aa4.43□□□□□ -1.7
RAB3IP-206ENST00000481897 NUP153P49790 1475 aaKnown RBP4.42□□□□□ -1.7
RAB3IP-206ENST00000481897 TIAM1Q13009 1591 aa4.42□□□□□ -1.7
RAB3IP-206ENST00000481897 MAST1Q9Y2H9 1570 aa4.42□□□□□ -1.7
RAB3IP-206ENST00000481897 PPRC1Q5VV67 1664 aaKnown RBP4.42□□□□□ -1.7
RAB3IP-206ENST00000481897 EPRSP07814 1512 aaKnown RBP4.42□□□□□ -1.7
RAB3IP-206ENST00000481897 CEP162Q5TB80 1403 aa4.42□□□□□ -1.7
RAB3IP-206ENST00000481897 MAGI2Q86UL8 1455 aa4.42□□□□□ -1.7
RAB3IP-206ENST00000481897 ARHGEF5Q12774 1597 aa4.42□□□□□ -1.7
RAB3IP-206ENST00000481897 LRRIQ1Q96JM4 1722 aa4.41□□□□□ -1.7
RAB3IP-206ENST00000481897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.41□□□□□ -1.7
RAB3IP-206ENST00000481897 TROQ12816 1431 aaPredicted RBP4.41□□□□□ -1.7
RAB3IP-206ENST00000481897 SAMD1Q6SPF0 538 aaPredicted RBP4.4□□□□□ -1.71
RAB3IP-206ENST00000481897 RBM42Q9BTD8 480 aaKnown RBP4.4□□□□□ -1.71
RAB3IP-206ENST00000481897 KDM5CP41229 1560 aa4.39□□□□□ -1.71
RAB3IP-206ENST00000481897 SHANK2Q9UPX8 1470 aa4.39□□□□□ -1.71
RAB3IP-206ENST00000481897 MIA2Q96PC5 1412 aa4.39□□□□□ -1.71
RAB3IP-206ENST00000481897 EIF2AK4Q9P2K8 1649 aaKnown RBP4.39□□□□□ -1.71
RAB3IP-206ENST00000481897 ATP10BO94823 1461 aa4.39□□□□□ -1.71
RAB3IP-206ENST00000481897 CROCC2H7BZ55 1655 aa4.39□□□□□ -1.71
RAB3IP-206ENST00000481897 ZNF219Q9P2Y4 722 aaPredicted RBP4.39□□□□□ -1.71
RAB3IP-206ENST00000481897 CDK11AQ9UQ88 783 aaPredicted RBP4.39□□□□□ -1.71
RAB3IP-206ENST00000481897 KIAA1107Q9UPP5 1409 aa4.39□□□□□ -1.71
RAB3IP-206ENST00000481897 CDC42BPAQ5VT25 1732 aa4.38□□□□□ -1.71
RAB3IP-206ENST00000481897 PLXNC1O60486 1568 aa4.38□□□□□ -1.71
RAB3IP-206ENST00000481897 TCOF1Q13428 1488 aaKnown RBP4.38□□□□□ -1.71
RAB3IP-206ENST00000481897 KDM6BO15054 1643 aa4.38□□□□□ -1.71
RAB3IP-206ENST00000481897 ASXL2Q76L83 1435 aa4.38□□□□□ -1.71
RAB3IP-206ENST00000481897 RICTORQ6R327 1708 aa4.38□□□□□ -1.71
RAB3IP-206ENST00000481897 ADGBQ8N7X0 1667 aa4.38□□□□□ -1.71
RAB3IP-206ENST00000481897 AKNAQ7Z591 1439 aa4.37□□□□□ -1.71
RAB3IP-206ENST00000481897 ZC3H13Q5T200 1668 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-206ENST00000481897 ABCC1P33527 1531 aa4.37□□□□□ -1.71
RAB3IP-206ENST00000481897 AGLP35573 1532 aa4.37□□□□□ -1.71
RAB3IP-206ENST00000481897 FHOD3Q2V2M9 1422 aa4.37□□□□□ -1.71
RAB3IP-206ENST00000481897 ZBTB12Q9Y330 459 aaPredicted RBP4.37□□□□□ -1.71
RAB3IP-206ENST00000481897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.37□□□□□ -1.71
RAB3IP-206ENST00000481897 ARHGEF40Q8TER5 1519 aa4.37□□□□□ -1.71
RAB3IP-206ENST00000481897 MROH2AA6NES4 1674 aa4.36□□□□□ -1.71
RAB3IP-206ENST00000481897 RTEL1-TNFRSF6BF6WH68 1400 aa4.36□□□□□ -1.71
RAB3IP-206ENST00000481897 NPM1P06748 294 aaKnown RBP eCLIP4.36□□□□□ -1.71
RAB3IP-206ENST00000481897 INO80Q9ULG1 1556 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-206ENST00000481897 PLCH2O75038 1416 aa4.36□□□□□ -1.71
RAB3IP-206ENST00000481897 CDC42BPBQ9Y5S2 1711 aa4.36□□□□□ -1.71
RAB3IP-206ENST00000481897 LRRC9Q6ZRR7 1453 aa4.35□□□□□ -1.71
RAB3IP-206ENST00000481897 TTC37Q6PGP7 1564 aa4.35□□□□□ -1.71
RAB3IP-206ENST00000481897 HECW2Q9P2P5 1572 aa4.35□□□□□ -1.71
RAB3IP-206ENST00000481897 RSPH4AQ5TD94 716 aa4.35□□□□□ -1.71
RAB3IP-206ENST00000481897 MLH3Q9UHC1 1453 aa4.35□□□□□ -1.71
RAB3IP-206ENST00000481897 FBLN2P98095 1184 aa4.34□□□□□ -1.71
RAB3IP-206ENST00000481897 ADGRL2O95490 1459 aa4.34□□□□□ -1.71
RAB3IP-206ENST00000481897 ZNF518AQ6AHZ1 1483 aa4.34□□□□□ -1.71
RAB3IP-206ENST00000481897 DNMT1P26358 1616 aaKnown RBP4.34□□□□□ -1.71
RAB3IP-206ENST00000481897 RNF17Q9BXT8 1623 aaKnown RBP4.34□□□□□ -1.71
RAB3IP-206ENST00000481897 KDM5AP29375 1690 aaKnown RBP4.34□□□□□ -1.72
RAB3IP-206ENST00000481897 FRMPD1Q5SYB0 1578 aa4.33□□□□□ -1.72
RAB3IP-206ENST00000481897 KDM5DQ9BY66 1539 aa4.33□□□□□ -1.72
RAB3IP-206ENST00000481897 PTPN23Q9H3S7 1636 aa4.33□□□□□ -1.72
RAB3IP-206ENST00000481897 DEPDC5O75140 1603 aa4.33□□□□□ -1.72
RAB3IP-206ENST00000481897 ILDR2Q71H61 639 aa4.32□□□□□ -1.72
RAB3IP-206ENST00000481897 POGZQ7Z3K3 1410 aa4.32□□□□□ -1.72
RAB3IP-206ENST00000481897 GCC2Q8IWJ2 1684 aa4.32□□□□□ -1.72
RAB3IP-206ENST00000481897 MYOM3Q5VTT5 1437 aa4.32□□□□□ -1.72
RAB3IP-206ENST00000481897 SAMD9LQ8IVG5 1584 aa4.32□□□□□ -1.72
RAB3IP-206ENST00000481897 NEURL4Q96JN8 1562 aa4.32□□□□□ -1.72
RAB3IP-206ENST00000481897 NPM3O75607 178 aaKnown RBP4.32□□□□□ -1.72
RAB3IP-206ENST00000481897 CD109Q6YHK3 1445 aa4.31□□□□□ -1.72
RAB3IP-206ENST00000481897 DENND4BO75064 1496 aaPredicted RBP4.31□□□□□ -1.72
RAB3IP-206ENST00000481897 CDK13Q14004 1512 aaKnown RBP4.31□□□□□ -1.72
RAB3IP-206ENST00000481897 ZFYVE16Q7Z3T8 1539 aa4.31□□□□□ -1.72
RAB3IP-206ENST00000481897 FANCAO15360 1455 aa4.31□□□□□ -1.72
RAB3IP-206ENST00000481897 NCOA2Q15596 1464 aa4.31□□□□□ -1.72
RAB3IP-206ENST00000481897 CCDC141Q6ZP82 1450 aa4.31□□□□□ -1.72
RAB3IP-206ENST00000481897 GPATCH8Q9UKJ3 1502 aaKnown RBP4.31□□□□□ -1.72
RAB3IP-206ENST00000481897 PLEKHD1A6NEE1 506 aa4.3□□□□□ -1.72
RAB3IP-206ENST00000481897 UBTFP17480 764 aaKnown RBP4.3□□□□□ -1.72
RAB3IP-206ENST00000481897 DSG3P32926 999 aa4.3□□□□□ -1.72
RAB3IP-206ENST00000481897 ROCK1Q13464 1354 aa4.3□□□□□ -1.72
RAB3IP-206ENST00000481897 LMTK2Q8IWU2 1503 aa4.3□□□□□ -1.72
RAB3IP-206ENST00000481897 RRBP1Q9P2E9 1410 aaKnown RBP4.3□□□□□ -1.72
RAB3IP-206ENST00000481897 UNC13BO14795 1591 aa4.3□□□□□ -1.72
RAB3IP-206ENST00000481897 CNTLNQ9NXG0 1405 aa4.3□□□□□ -1.72
RAB3IP-206ENST00000481897 DIP2CQ9Y2E4 1556 aa4.29□□□□□ -1.72
RAB3IP-206ENST00000481897 ARHGAP5Q13017 1502 aa4.29□□□□□ -1.72
RAB3IP-206ENST00000481897 DUOX2Q9NRD8 1548 aa4.29□□□□□ -1.72
RAB3IP-206ENST00000481897 ERBINQ96RT1 1412 aa4.29□□□□□ -1.72
RAB3IP-206ENST00000481897 ADAMTSL3P82987 1691 aa4.29□□□□□ -1.72
RAB3IP-206ENST00000481897 ATP7AQ04656 1500 aa4.29□□□□□ -1.72
RAB3IP-206ENST00000481897 C9orf84Q5VXU9 1444 aa4.29□□□□□ -1.72
RAB3IP-206ENST00000481897 ADGRL1O94910 1474 aa4.28□□□□□ -1.72
RAB3IP-206ENST00000481897 CAMSAP2Q08AD1 1489 aa4.28□□□□□ -1.72
RAB3IP-206ENST00000481897 KIDINS220Q9ULH0 1771 aa4.28□□□□□ -1.72
RAB3IP-206ENST00000481897 MTUS2Q5JR59 1369 aa4.28□□□□□ -1.72
RAB3IP-206ENST00000481897 VWDEQ8N2E2 1590 aa4.28□□□□□ -1.72
RAB3IP-206ENST00000481897 PRDM15P57071 1507 aaPredicted RBP4.28□□□□□ -1.72
RAB3IP-206ENST00000481897 ZNF142P52746 1687 aaPredicted RBP4.28□□□□□ -1.72
RAB3IP-206ENST00000481897 U3KPZ7 1027 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms