RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 PLEKHD1A6NEE1 506 aa26.82■■□□□ 1.88
MRPL28-209ENST00000481453 CHIC2Q9UKJ5 165 aa26.82■■□□□ 1.88
MRPL28-209ENST00000481453 CAMSAP2Q08AD1 1489 aa26.82■■□□□ 1.88
MRPL28-209ENST00000481453 RRP7BPQ9NSQ0 103 aa26.81■■□□□ 1.88
MRPL28-209ENST00000481453 CDC42BPAQ5VT25 1732 aa26.81■■□□□ 1.88
MRPL28-209ENST00000481453 KDM6BO15054 1643 aa26.8■■□□□ 1.88
MRPL28-209ENST00000481453 ABCC2Q92887 1545 aa26.78■■□□□ 1.88
MRPL28-209ENST00000481453 CFDP1Q9UEE9 299 aaPredicted RBP26.77■■□□□ 1.88
MRPL28-209ENST00000481453 ROCK1Q13464 1354 aa26.77■■□□□ 1.88
MRPL28-209ENST00000481453 PELP1Q8IZL8 1130 aaKnown RBP26.74■■□□□ 1.87
MRPL28-209ENST00000481453 SIN3AQ96ST3 1273 aa26.73■■□□□ 1.87
MRPL28-209ENST00000481453 GTF3C3Q9Y5Q9 886 aa26.72■■□□□ 1.87
MRPL28-209ENST00000481453 CROCC2H7BZ55 1655 aa26.71■■□□□ 1.87
MRPL28-209ENST00000481453 MIER1Q8N108 512 aa26.68■■□□□ 1.86
MRPL28-209ENST00000481453 ADGBQ8N7X0 1667 aa26.66■■□□□ 1.86
MRPL28-209ENST00000481453 DENND4BO75064 1496 aaPredicted RBP26.66■■□□□ 1.86
MRPL28-209ENST00000481453 UHRF1BP1LA0JNW5 1464 aa26.66■■□□□ 1.86
MRPL28-209ENST00000481453 ZNF777Q9ULD5 760 aaPredicted RBP26.64■■□□□ 1.86
MRPL28-209ENST00000481453 PREX2Q70Z35 1606 aa26.63■■□□□ 1.85
MRPL28-209ENST00000481453 ADGRL2O95490 1459 aa26.63■■□□□ 1.85
MRPL28-209ENST00000481453 CDC42BPBQ9Y5S2 1711 aa26.62■■□□□ 1.85
MRPL28-209ENST00000481453 ZCCHC11Q5TAX3 1644 aaKnown RBP26.61■■□□□ 1.85
MRPL28-209ENST00000481453 YTHDC1Q96MU7 727 aaKnown RBP26.61■■□□□ 1.85
MRPL28-209ENST00000481453 TIMELESSQ9UNS1 1208 aa26.6■■□□□ 1.85
MRPL28-209ENST00000481453 NCOA1Q15788 1441 aa26.6■■□□□ 1.85
MRPL28-209ENST00000481453 TTC37Q6PGP7 1564 aa26.6■■□□□ 1.85
MRPL28-209ENST00000481453 KDM5BQ9UGL1 1544 aa26.59■■□□□ 1.85
MRPL28-209ENST00000481453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.58■■□□□ 1.85
MRPL28-209ENST00000481453 SHANK2Q9UPX8 1470 aa26.56■■□□□ 1.84
MRPL28-209ENST00000481453 SAMD9LQ8IVG5 1584 aa26.56■■□□□ 1.84
MRPL28-209ENST00000481453 ARHGEF5Q12774 1597 aa26.55■■□□□ 1.84
MRPL28-209ENST00000481453 TRIM52Q96A61 297 aa26.54■■□□□ 1.84
MRPL28-209ENST00000481453 MBD5Q9P267 1494 aa26.53■■□□□ 1.84
MRPL28-209ENST00000481453 C9orf84Q5VXU9 1444 aa26.5■■□□□ 1.83
MRPL28-209ENST00000481453 MPHOSPH9Q99550 1183 aa26.5■■□□□ 1.83
MRPL28-209ENST00000481453 ANKRD30AQ9BXX3 1397 aa26.49■■□□□ 1.83
MRPL28-209ENST00000481453 MYO5CQ9NQX4 1742 aa26.48■■□□□ 1.83
MRPL28-209ENST00000481453 PPP1R15AO75807 674 aaPredicted RBP26.47■■□□□ 1.83
MRPL28-209ENST00000481453 TONSLQ96HA7 1378 aa26.45■■□□□ 1.82
MRPL28-209ENST00000481453 ARHGAP5Q13017 1502 aa26.45■■□□□ 1.82
MRPL28-209ENST00000481453 HNRNPMP52272 730 aaKnown RBP eCLIP26.45■■□□□ 1.823e-8■■■□□ 15.8
MRPL28-209ENST00000481453 PZPP20742 1482 aa26.43■■□□□ 1.82
MRPL28-209ENST00000481453 CCDC141Q6ZP82 1450 aa26.43■■□□□ 1.82
MRPL28-209ENST00000481453 SYCP2Q9BX26 1530 aa26.41■■□□□ 1.82
MRPL28-209ENST00000481453 ANKRD50Q9ULJ7 1429 aa26.4■■□□□ 1.82
MRPL28-209ENST00000481453 OSCARQ8IYS5 282 aa26.39■■□□□ 1.82
MRPL28-209ENST00000481453 KCNH8Q96L42 1107 aa26.39■■□□□ 1.82
MRPL28-209ENST00000481453 ANKRD30BQ9BXX2 1392 aa26.37■■□□□ 1.81
MRPL28-209ENST00000481453 FOXD1Q16676 465 aa26.37■■□□□ 1.81
MRPL28-209ENST00000481453 PLCH2O75038 1416 aa26.37■■□□□ 1.81
MRPL28-209ENST00000481453 TSPY4P0CV99 314 aa26.37■■□□□ 1.81
MRPL28-209ENST00000481453 TSPY10P0CW01 314 aa26.37■■□□□ 1.81
MRPL28-209ENST00000481453 MAST1Q9Y2H9 1570 aa26.35■■□□□ 1.81
MRPL28-209ENST00000481453 KIAA1107Q9UPP5 1409 aa26.34■■□□□ 1.81
MRPL28-209ENST00000481453 RSPH4AQ5TD94 716 aa26.34■■□□□ 1.81
MRPL28-209ENST00000481453 PLEKHH2Q8IVE3 1493 aa26.33■■□□□ 1.81
MRPL28-209ENST00000481453 SLC4A1APQ9BWU0 796 aaKnown RBP26.33■■□□□ 1.81
MRPL28-209ENST00000481453 KIF15Q9NS87 1388 aa26.33■■□□□ 1.81
MRPL28-209ENST00000481453 WDR7Q9Y4E6 1490 aa26.32■■□□□ 1.8
MRPL28-209ENST00000481453 ARHGEF12Q9NZN5 1544 aa26.32■■□□□ 1.8
MRPL28-209ENST00000481453 KDM5DQ9BY66 1539 aa26.29■■□□□ 1.8
MRPL28-209ENST00000481453 RPRD2Q5VT52 1461 aaKnown RBP26.29■■□□□ 1.8
MRPL28-209ENST00000481453 ABCC1P33527 1531 aa26.27■■□□□ 1.8
MRPL28-209ENST00000481453 ARAP3Q8WWN8 1544 aa26.27■■□□□ 1.8
MRPL28-209ENST00000481453 PLXNC1O60486 1568 aa26.25■■□□□ 1.79
MRPL28-209ENST00000481453 EFCAB2Q5VUJ9 269 aa26.23■■□□□ 1.79
MRPL28-209ENST00000481453 ABCA9Q8IUA7 1624 aa26.23■■□□□ 1.79
MRPL28-209ENST00000481453 TEX14Q8IWB6 1497 aa26.22■■□□□ 1.79
MRPL28-209ENST00000481453 ASXL2Q76L83 1435 aa26.2■■□□□ 1.79
MRPL28-209ENST00000481453 NUP155O75694 1391 aa26.2■■□□□ 1.78
MRPL28-209ENST00000481453 L3MBTL2Q969R5 705 aa26.18■■□□□ 1.78
MRPL28-209ENST00000481453 PKD2Q13563 968 aa26.18■■□□□ 1.78
MRPL28-209ENST00000481453 TRAPPC8Q9Y2L5 1435 aa26.17■■□□□ 1.78
MRPL28-209ENST00000481453 UNC13BO14795 1591 aa26.15■■□□□ 1.78
MRPL28-209ENST00000481453 DUOX2Q9NRD8 1548 aa26.12■■□□□ 1.77
MRPL28-209ENST00000481453 FAM135AQ9P2D6 1515 aa26.12■■□□□ 1.77
MRPL28-209ENST00000481453 HIRIP3Q9BW71 556 aaPredicted RBP26.1■■□□□ 1.77
MRPL28-209ENST00000481453 FANCAO15360 1455 aa26.09■■□□□ 1.77
MRPL28-209ENST00000481453 ZFYVE16Q7Z3T8 1539 aa26.06■■□□□ 1.76
MRPL28-209ENST00000481453 ERBINQ96RT1 1412 aa26.06■■□□□ 1.76
MRPL28-209ENST00000481453 MAGI2Q86UL8 1455 aa26.04■■□□□ 1.76
MRPL28-209ENST00000481453 RTEL1-TNFRSF6BF6WH68 1400 aa26.04■■□□□ 1.76
MRPL28-209ENST00000481453 IQGAP3Q86VI3 1631 aa26.04■■□□□ 1.76
MRPL28-209ENST00000481453 NBPF8Q3BBV2 869 aa26.03■■□□□ 1.76
MRPL28-209ENST00000481453 NPM1P06748 294 aaKnown RBP eCLIP26.02■■□□□ 1.76
MRPL28-209ENST00000481453 AFAP1Q8N556 730 aa26.02■■□□□ 1.76
MRPL28-209ENST00000481453 INO80Q9ULG1 1556 aaPredicted RBP26.01■■□□□ 1.75
MRPL28-209ENST00000481453 SPAG9O60271 1321 aaKnown RBP26■■□□□ 1.75
MRPL28-209ENST00000481453 ADGRL1O94910 1474 aa25.99■■□□□ 1.75
MRPL28-209ENST00000481453 DDX10Q13206 875 aaKnown RBP25.98■■□□□ 1.75
MRPL28-209ENST00000481453 SCAPERQ9BY12 1400 aa25.96■■□□□ 1.75
MRPL28-209ENST00000481453 ATP7AQ04656 1500 aa25.96■■□□□ 1.75
MRPL28-209ENST00000481453 HSPA5P11021 654 aaKnown RBP25.95■■□□□ 1.75
MRPL28-209ENST00000481453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.92■■□□□ 1.748e-6■□□□□ 8.2
MRPL28-209ENST00000481453 PLA2R1Q13018 1463 aa25.92■■□□□ 1.74
MRPL28-209ENST00000481453 EIF4G2P78344 907 aaKnown RBP eCLIP25.9■■□□□ 1.74
MRPL28-209ENST00000481453 CD109Q6YHK3 1445 aa25.89■■□□□ 1.74
MRPL28-209ENST00000481453 DEPDC5O75140 1603 aa25.89■■□□□ 1.73
MRPL28-209ENST00000481453 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
MRPL28-209ENST00000481453 CFAP74Q9C0B2 1584 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms