RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 NCOA2Q15596 1464 aa15.94■□□□□ 0.14
LINC00173-203ENST00000480237 POLA2Q14181 598 aa15.94■□□□□ 0.14
LINC00173-203ENST00000480237 RRBP1Q9P2E9 1410 aaKnown RBP15.93■□□□□ 0.14
LINC00173-203ENST00000480237 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
LINC00173-203ENST00000480237 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
LINC00173-203ENST00000480237 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
LINC00173-203ENST00000480237 PTPN23Q9H3S7 1636 aa15.92■□□□□ 0.14
LINC00173-203ENST00000480237 UACAQ9BZF9 1416 aa15.92■□□□□ 0.14
LINC00173-203ENST00000480237 MYO5CQ9NQX4 1742 aa15.92■□□□□ 0.14
LINC00173-203ENST00000480237 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
LINC00173-203ENST00000480237 ATP10BO94823 1461 aa15.88■□□□□ 0.13
LINC00173-203ENST00000480237 TROQ12816 1431 aaPredicted RBP15.88■□□□□ 0.13
LINC00173-203ENST00000480237 CCNB3Q8WWL7 1395 aa15.88■□□□□ 0.13
LINC00173-203ENST00000480237 UHRF1BP1LA0JNW5 1464 aa15.87■□□□□ 0.13
LINC00173-203ENST00000480237 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
LINC00173-203ENST00000480237 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
LINC00173-203ENST00000480237 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
LINC00173-203ENST00000480237 MYOM3Q5VTT5 1437 aa15.86■□□□□ 0.13
LINC00173-203ENST00000480237 CDC42BPBQ9Y5S2 1711 aa15.86■□□□□ 0.13
LINC00173-203ENST00000480237 CDK11AQ9UQ88 783 aaPredicted RBP15.85■□□□□ 0.13
LINC00173-203ENST00000480237 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
LINC00173-203ENST00000480237 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
LINC00173-203ENST00000480237 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
LINC00173-203ENST00000480237 ADGBQ8N7X0 1667 aa15.82■□□□□ 0.12
LINC00173-203ENST00000480237 KDM5BQ9UGL1 1544 aa15.82■□□□□ 0.12
LINC00173-203ENST00000480237 TTC37Q6PGP7 1564 aa15.81■□□□□ 0.12
LINC00173-203ENST00000480237 GCC2Q8IWJ2 1684 aa15.79■□□□□ 0.12
LINC00173-203ENST00000480237 DNMT1P26358 1616 aaKnown RBP15.78■□□□□ 0.12
LINC00173-203ENST00000480237 TCOF1Q13428 1488 aaKnown RBP15.77■□□□□ 0.11
LINC00173-203ENST00000480237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC00173-203ENST00000480237 MIA2Q96PC5 1412 aa15.75■□□□□ 0.11
LINC00173-203ENST00000480237 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
LINC00173-203ENST00000480237 ABCC10Q5T3U5 1492 aa15.75■□□□□ 0.11
LINC00173-203ENST00000480237 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
LINC00173-203ENST00000480237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC00173-203ENST00000480237 CAMSAP2Q08AD1 1489 aa15.72■□□□□ 0.11
LINC00173-203ENST00000480237 GPATCH8Q9UKJ3 1502 aaKnown RBP15.71■□□□□ 0.11
LINC00173-203ENST00000480237 ITGAEP38570 1179 aa15.7■□□□□ 0.1
LINC00173-203ENST00000480237 ABCA9Q8IUA7 1624 aa15.7■□□□□ 0.1
LINC00173-203ENST00000480237 SAMD9LQ8IVG5 1584 aa15.69■□□□□ 0.1
LINC00173-203ENST00000480237 WDR7Q9Y4E6 1490 aa15.69■□□□□ 0.1
LINC00173-203ENST00000480237 ARHGAP5Q13017 1502 aa15.67■□□□□ 0.1
LINC00173-203ENST00000480237 ARHGEF5Q12774 1597 aa15.64■□□□□ 0.09
LINC00173-203ENST00000480237 CFAP74Q9C0B2 1584 aa15.64■□□□□ 0.09
LINC00173-203ENST00000480237 ASXL2Q76L83 1435 aa15.62■□□□□ 0.09
LINC00173-203ENST00000480237 DAPK1P53355 1430 aa15.62■□□□□ 0.09
LINC00173-203ENST00000480237 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
LINC00173-203ENST00000480237 ARAP3Q8WWN8 1544 aa15.61■□□□□ 0.09
LINC00173-203ENST00000480237 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
LINC00173-203ENST00000480237 CFDP1Q9UEE9 299 aaPredicted RBP15.61■□□□□ 0.09
LINC00173-203ENST00000480237 MAPKBP1O60336 1514 aa15.61■□□□□ 0.09
LINC00173-203ENST00000480237 SYCP2Q9BX26 1530 aa15.6■□□□□ 0.09
LINC00173-203ENST00000480237 HRCP23327 699 aa15.6■□□□□ 0.09
LINC00173-203ENST00000480237 NPM1P06748 294 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC00173-203ENST00000480237 PTPRKQ15262 1439 aa15.59■□□□□ 0.09
LINC00173-203ENST00000480237 SETD5Q9C0A6 1442 aa15.59■□□□□ 0.09
LINC00173-203ENST00000480237 KIF13AQ9H1H9 1805 aa15.59■□□□□ 0.09
LINC00173-203ENST00000480237 KCNH8Q96L42 1107 aa15.58■□□□□ 0.09
LINC00173-203ENST00000480237 ABCC1P33527 1531 aa15.58■□□□□ 0.08
LINC00173-203ENST00000480237 CCER1Q8TC90 406 aaPredicted RBP15.58■□□□□ 0.08
LINC00173-203ENST00000480237 AKNAQ7Z591 1439 aa15.57■□□□□ 0.08
LINC00173-203ENST00000480237 MAP3K4Q9Y6R4 1608 aa15.57■□□□□ 0.08
LINC00173-203ENST00000480237 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
LINC00173-203ENST00000480237 ZNF777Q9ULD5 760 aaPredicted RBP15.57■□□□□ 0.08
LINC00173-203ENST00000480237 SHANK2Q9UPX8 1470 aa15.56■□□□□ 0.08
LINC00173-203ENST00000480237 RAB3GAP2Q9H2M9 1393 aa15.56■□□□□ 0.08
LINC00173-203ENST00000480237 HFM1A2PYH4 1435 aa15.56■□□□□ 0.08
LINC00173-203ENST00000480237 ZNF644Q9H582 1327 aaPredicted RBP15.56■□□□□ 0.08
LINC00173-203ENST00000480237 KDM6BO15054 1643 aa15.56■□□□□ 0.08
LINC00173-203ENST00000480237 ABCC5O15440 1437 aa15.55■□□□□ 0.08
LINC00173-203ENST00000480237 MAST1Q9Y2H9 1570 aa15.55■□□□□ 0.08
LINC00173-203ENST00000480237 PLEKHH2Q8IVE3 1493 aa15.55■□□□□ 0.08
LINC00173-203ENST00000480237 CCDC141Q6ZP82 1450 aa15.53■□□□□ 0.08
LINC00173-203ENST00000480237 PLCH2O75038 1416 aa15.53■□□□□ 0.08
LINC00173-203ENST00000480237 CYB5RLQ6IPT4 315 aa15.53■□□□□ 0.08
LINC00173-203ENST00000480237 DIP2BQ9P265 1576 aa15.52■□□□□ 0.08
LINC00173-203ENST00000480237 NAIPQ13075 1403 aa15.52■□□□□ 0.08
LINC00173-203ENST00000480237 ADGRL2O95490 1459 aa15.52■□□□□ 0.08
LINC00173-203ENST00000480237 PLXNC1O60486 1568 aa15.52■□□□□ 0.07
LINC00173-203ENST00000480237 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
LINC00173-203ENST00000480237 CHIC2Q9UKJ5 165 aa15.49■□□□□ 0.07
LINC00173-203ENST00000480237 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
LINC00173-203ENST00000480237 GLI2P10070 1586 aa15.49■□□□□ 0.07
LINC00173-203ENST00000480237 C9orf84Q5VXU9 1444 aa15.49■□□□□ 0.07
LINC00173-203ENST00000480237 FANCAO15360 1455 aa15.49■□□□□ 0.07
LINC00173-203ENST00000480237 MBD5Q9P267 1494 aa15.48■□□□□ 0.07
LINC00173-203ENST00000480237 PPRC1Q5VV67 1664 aaKnown RBP15.47■□□□□ 0.07
LINC00173-203ENST00000480237 DHX57Q6P158 1386 aaKnown RBP15.47■□□□□ 0.07
LINC00173-203ENST00000480237 INO80Q9ULG1 1556 aaPredicted RBP15.46■□□□□ 0.07
LINC00173-203ENST00000480237 KIAA1107Q9UPP5 1409 aa15.46■□□□□ 0.06
LINC00173-203ENST00000480237 RICTORQ6R327 1708 aa15.45■□□□□ 0.06
LINC00173-203ENST00000480237 RRP7BPQ9NSQ0 103 aa15.45■□□□□ 0.06
LINC00173-203ENST00000480237 ARHGEF12Q9NZN5 1544 aa15.44■□□□□ 0.06
LINC00173-203ENST00000480237 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
LINC00173-203ENST00000480237 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
LINC00173-203ENST00000480237 ADGRL1O94910 1474 aa15.43■□□□□ 0.06
LINC00173-203ENST00000480237 ZFYVE16Q7Z3T8 1539 aa15.42■□□□□ 0.06
LINC00173-203ENST00000480237 HNRNPMP52272 730 aaKnown RBP eCLIP15.42■□□□□ 0.06
LINC00173-203ENST00000480237 KIDINS220Q9ULH0 1771 aa15.42■□□□□ 0.06
LINC00173-203ENST00000480237 NCOA1Q15788 1441 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms