RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 LMTK3Q96Q04 1460 aa34.17■■■■□ 3.06
CLIC3-202ENST00000480181 YEATS2Q9ULM3 1422 aa34.15■■■■□ 3.06
CLIC3-202ENST00000480181 ARHGAP35Q9NRY4 1499 aa34.14■■■■□ 3.06
CLIC3-202ENST00000480181 MYO5CQ9NQX4 1742 aa34.11■■■■□ 3.05
CLIC3-202ENST00000480181 EHMT2Q96KQ7 1210 aa34.11■■■■□ 3.05
CLIC3-202ENST00000480181 CLIP1P30622 1438 aa34.09■■■■□ 3.05
CLIC3-202ENST00000480181 CHIC1Q5VXU3 224 aa34.08■■■■□ 3.05
CLIC3-202ENST00000480181 ATP10AO60312 1499 aa34.07■■■■□ 3.05
CLIC3-202ENST00000480181 KIF14Q15058 1648 aa34.07■■■■□ 3.04
CLIC3-202ENST00000480181 TROQ12816 1431 aaPredicted RBP34.06■■■■□ 3.04
CLIC3-202ENST00000480181 MLECQ14165 292 aa34.05■■■■□ 3.04
CLIC3-202ENST00000480181 C9orf84Q5VXU9 1444 aa34.04■■■■□ 3.04
CLIC3-202ENST00000480181 ZNF518AQ6AHZ1 1483 aa34.02■■■■□ 3.04
CLIC3-202ENST00000480181 PLPPR3Q6T4P5 718 aa34.02■■■■□ 3.04
CLIC3-202ENST00000480181 FER1L4A9Z1Z3 1794 aa34■■■■□ 3.03
CLIC3-202ENST00000480181 SIGLEC1Q9BZZ2 1709 aa34■■■■□ 3.03
CLIC3-202ENST00000480181 ARHGAP5Q13017 1502 aa33.99■■■■□ 3.03
CLIC3-202ENST00000480181 ARHGEF12Q9NZN5 1544 aa33.95■■■■□ 3.03
CLIC3-202ENST00000480181 HSPA2P54652 639 aa33.95■■■■□ 3.03
CLIC3-202ENST00000480181 MYT1LQ9UL68 1186 aa33.91■■■■□ 3.02
CLIC3-202ENST00000480181 KDM5CP41229 1560 aa33.9■■■■□ 3.02
CLIC3-202ENST00000480181 CCDC18Q5T9S5 1454 aa33.89■■■■□ 3.02
CLIC3-202ENST00000480181 AFAP1Q8N556 730 aa33.89■■■■□ 3.02
CLIC3-202ENST00000480181 CASKIN1Q8WXD9 1431 aa33.86■■■■□ 3.01
CLIC3-202ENST00000480181 MLH3Q9UHC1 1453 aa33.82■■■■□ 3
CLIC3-202ENST00000480181 LRRIQ1Q96JM4 1722 aa33.82■■■■□ 3
CLIC3-202ENST00000480181 REREQ9P2R6 1566 aa33.81■■■■□ 3
CLIC3-202ENST00000480181 PREX1Q8TCU6 1659 aa33.8■■■■□ 3
CLIC3-202ENST00000480181 CDC42BPBQ9Y5S2 1711 aa33.79■■■■□ 3
CLIC3-202ENST00000480181 PREX2Q70Z35 1606 aa33.77■■■■□ 3
CLIC3-202ENST00000480181 DIP2CQ9Y2E4 1556 aa33.77■■■■□ 3
CLIC3-202ENST00000480181 DMRT2Q9Y5R5 561 aa33.76■■■□□ 2.99
CLIC3-202ENST00000480181 ESF1Q9H501 851 aaKnown RBP33.75■■■□□ 2.99
CLIC3-202ENST00000480181 CEBPAP49715 358 aaPredicted RBP33.74■■■□□ 2.99
CLIC3-202ENST00000480181 ABCC1P33527 1531 aa33.74■■■□□ 2.99
CLIC3-202ENST00000480181 CERKQ8TCT0 537 aa33.73■■■□□ 2.99
CLIC3-202ENST00000480181 SETD1BQ9UPS6 1966 aaKnown RBP33.72■■■□□ 2.99
CLIC3-202ENST00000480181 UHRF1BP1Q6BDS2 1440 aa33.71■■■□□ 2.99
CLIC3-202ENST00000480181 FYCO1Q9BQS8 1478 aa33.71■■■□□ 2.99
CLIC3-202ENST00000480181 AGLP35573 1532 aa33.71■■■□□ 2.99
CLIC3-202ENST00000480181 TRAPPC8Q9Y2L5 1435 aa33.69■■■□□ 2.98
CLIC3-202ENST00000480181 ABCA6Q8N139 1617 aa33.68■■■□□ 2.98
CLIC3-202ENST00000480181 ITSN2Q9NZM3 1697 aa33.67■■■□□ 2.98
CLIC3-202ENST00000480181 CDC42BPAQ5VT25 1732 aa33.62■■■□□ 2.97
CLIC3-202ENST00000480181 CNTLNQ9NXG0 1405 aa33.62■■■□□ 2.97
CLIC3-202ENST00000480181 ZNF777Q9ULD5 760 aaPredicted RBP33.57■■■□□ 2.96
CLIC3-202ENST00000480181 KIDINS220Q9ULH0 1771 aa33.57■■■□□ 2.96
CLIC3-202ENST00000480181 C3P01024 1663 aa33.56■■■□□ 2.96
CLIC3-202ENST00000480181 GPATCH8Q9UKJ3 1502 aaKnown RBP33.53■■■□□ 2.96
CLIC3-202ENST00000480181 SPAG9O60271 1321 aaKnown RBP33.53■■■□□ 2.96
CLIC3-202ENST00000480181 STRCQ7RTU9 1775 aa33.52■■■□□ 2.96
CLIC3-202ENST00000480181 SAMD9LQ8IVG5 1584 aa33.52■■■□□ 2.96
CLIC3-202ENST00000480181 PLEKHH2Q8IVE3 1493 aa33.52■■■□□ 2.96
CLIC3-202ENST00000480181 KIAA1107Q9UPP5 1409 aa33.5■■■□□ 2.95
CLIC3-202ENST00000480181 PTPRTO14522 1441 aa33.49■■■□□ 2.95
CLIC3-202ENST00000480181 CFDP1Q9UEE9 299 aaPredicted RBP33.49■■■□□ 2.95
CLIC3-202ENST00000480181 SYCP2Q9BX26 1530 aa33.48■■■□□ 2.95
CLIC3-202ENST00000480181 CCNB3Q8WWL7 1395 aa33.47■■■□□ 2.95
CLIC3-202ENST00000480181 HNRNPMP52272 730 aaKnown RBP eCLIP33.45■■■□□ 2.95
CLIC3-202ENST00000480181 NPATQ14207 1427 aa33.44■■■□□ 2.94
CLIC3-202ENST00000480181 MTUS2Q5JR59 1369 aa33.43■■■□□ 2.94
CLIC3-202ENST00000480181 MROH2AA6NES4 1674 aa33.42■■■□□ 2.94
CLIC3-202ENST00000480181 ATP7AQ04656 1500 aa33.4■■■□□ 2.94
CLIC3-202ENST00000480181 ZMYM3Q14202 1370 aa33.38■■■□□ 2.93
CLIC3-202ENST00000480181 A2MP01023 1474 aa33.35■■■□□ 2.93
CLIC3-202ENST00000480181 NCOA1Q15788 1441 aa33.35■■■□□ 2.93
CLIC3-202ENST00000480181 SUPT6HQ7KZ85 1726 aaKnown RBP33.34■■■□□ 2.93
CLIC3-202ENST00000480181 PPP6R1Q9UPN7 881 aa33.34■■■□□ 2.93
CLIC3-202ENST00000480181 INO80Q9ULG1 1556 aaPredicted RBP33.34■■■□□ 2.93
CLIC3-202ENST00000480181 PLXNC1O60486 1568 aa33.31■■■□□ 2.92
CLIC3-202ENST00000480181 IQSEC2Q5JU85 1478 aa33.26■■■□□ 2.92
CLIC3-202ENST00000480181 EHBP1L1Q8N3D4 1523 aa33.26■■■□□ 2.91
CLIC3-202ENST00000480181 CAMSAP1Q5T5Y3 1602 aa33.25■■■□□ 2.91
CLIC3-202ENST00000480181 GGT6Q6P531 493 aa33.25■■■□□ 2.91
CLIC3-202ENST00000480181 ADGBQ8N7X0 1667 aa33.24■■■□□ 2.91
CLIC3-202ENST00000480181 CLTCQ00610 1675 aaKnown RBP33.23■■■□□ 2.91
CLIC3-202ENST00000480181 RTEL1-TNFRSF6BF6WH68 1400 aa33.22■■■□□ 2.91
CLIC3-202ENST00000480181 CEP162Q5TB80 1403 aa33.21■■■□□ 2.91
CLIC3-202ENST00000480181 TIAM1Q13009 1591 aa33.21■■■□□ 2.91
CLIC3-202ENST00000480181 LTBP4Q8N2S1 1624 aa33.2■■■□□ 2.91
CLIC3-202ENST00000480181 PKD2Q13563 968 aa33.2■■■□□ 2.91
CLIC3-202ENST00000480181 PTPRKQ15262 1439 aa33.19■■■□□ 2.9
CLIC3-202ENST00000480181 PLA2R1Q13018 1463 aa33.18■■■□□ 2.9
CLIC3-202ENST00000480181 MBD5Q9P267 1494 aa33.18■■■□□ 2.9
CLIC3-202ENST00000480181 RSPH4AQ5TD94 716 aa33.16■■■□□ 2.9
CLIC3-202ENST00000480181 ZNF644Q9H582 1327 aaPredicted RBP33.16■■■□□ 2.9
CLIC3-202ENST00000480181 ZNF142P52746 1687 aaPredicted RBP33.16■■■□□ 2.9
CLIC3-202ENST00000480181 MYO3AQ8NEV4 1616 aa33.14■■■□□ 2.9
CLIC3-202ENST00000480181 DHX29Q7Z478 1369 aaKnown RBP33.13■■■□□ 2.89
CLIC3-202ENST00000480181 NCKAP5LQ9HCH0 1330 aa33.13■■■□□ 2.89
CLIC3-202ENST00000480181 CEP170BQ9Y4F5 1589 aaPredicted RBP33.13■■■□□ 2.89
CLIC3-202ENST00000480181 DISP3Q9P2K9 1392 aa33.11■■■□□ 2.89
CLIC3-202ENST00000480181 TCOF1Q13428 1488 aaKnown RBP33.06■■■□□ 2.88
CLIC3-202ENST00000480181 CCDC141Q6ZP82 1450 aa33.06■■■□□ 2.88
CLIC3-202ENST00000480181 FAM135AQ9P2D6 1515 aa33.05■■■□□ 2.88
CLIC3-202ENST00000480181 A2ML1A8K2U0 1454 aa33.03■■■□□ 2.88
CLIC3-202ENST00000480181 NCOA2Q15596 1464 aa33.02■■■□□ 2.88
CLIC3-202ENST00000480181 KIF3BO15066 747 aa33.02■■■□□ 2.88
CLIC3-202ENST00000480181 ZNF335Q9H4Z2 1342 aaPredicted RBP33.01■■■□□ 2.87
CLIC3-202ENST00000480181 CAMSAP2Q08AD1 1489 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms