RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 ANKRD30AQ9BXX3 1397 aa8.22□□□□□ -1.09
CPS1-207ENST00000479988 CASKIN1Q8WXD9 1431 aa8.22□□□□□ -1.09
CPS1-207ENST00000479988 YTHDC1Q96MU7 727 aaKnown RBP8.22□□□□□ -1.09
CPS1-207ENST00000479988 FYCO1Q9BQS8 1478 aa8.21□□□□□ -1.1
CPS1-207ENST00000479988 LRRC9Q6ZRR7 1453 aa8.2□□□□□ -1.1
CPS1-207ENST00000479988 WDR62O43379 1518 aa8.19□□□□□ -1.1
CPS1-207ENST00000479988 NPM2Q86SE8 214 aaKnown RBP8.19□□□□□ -1.1
CPS1-207ENST00000479988 DHX57Q6P158 1386 aaKnown RBP8.19□□□□□ -1.1
CPS1-207ENST00000479988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.19□□□□□ -1.1
CPS1-207ENST00000479988 EIF5BO60841 1220 aaKnown RBP8.18□□□□□ -1.1
CPS1-207ENST00000479988 RAB3GAP2Q9H2M9 1393 aa8.18□□□□□ -1.1
CPS1-207ENST00000479988 CD109Q6YHK3 1445 aa8.18□□□□□ -1.1
CPS1-207ENST00000479988 TIAM1Q13009 1591 aa8.18□□□□□ -1.1
CPS1-207ENST00000479988 HOMEZQ8IX15 550 aa8.18□□□□□ -1.1
CPS1-207ENST00000479988 PLB1Q6P1J6 1458 aa8.17□□□□□ -1.1
CPS1-207ENST00000479988 DMRT2Q9Y5R5 561 aa8.16□□□□□ -1.1
CPS1-207ENST00000479988 RAPGEF3O95398 923 aa8.15□□□□□ -1.1
CPS1-207ENST00000479988 KIF21AQ7Z4S6 1674 aa8.15□□□□□ -1.1
CPS1-207ENST00000479988 TEX14Q8IWB6 1497 aa8.15□□□□□ -1.1
CPS1-207ENST00000479988 ANP32CO43423 234 aa8.15□□□□□ -1.1
CPS1-207ENST00000479988 NEFLP07196 543 aa8.15□□□□□ -1.1
CPS1-207ENST00000479988 PHF23Q9BUL5 403 aaPredicted RBP8.15□□□□□ -1.1
CPS1-207ENST00000479988 TMC1Q8TDI8 760 aa8.14□□□□□ -1.11
CPS1-207ENST00000479988 ARHGAP5Q13017 1502 aa8.13□□□□□ -1.11
CPS1-207ENST00000479988 MEX3CQ5U5Q3 659 aaKnown RBP8.13□□□□□ -1.11
CPS1-207ENST00000479988 CCDC9Q9Y3X0 531 aaKnown RBP8.13□□□□□ -1.11
CPS1-207ENST00000479988 IQGAP2Q13576 1575 aa8.13□□□□□ -1.11
CPS1-207ENST00000479988 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
CPS1-207ENST00000479988 NUP155O75694 1391 aa8.13□□□□□ -1.11
CPS1-207ENST00000479988 AFAP1Q8N556 730 aa8.13□□□□□ -1.11
CPS1-207ENST00000479988 MIER1Q8N108 512 aa8.13□□□□□ -1.11
CPS1-207ENST00000479988 THEMISQ8N1K5 641 aaPredicted RBP8.13□□□□□ -1.11
CPS1-207ENST00000479988 FGD6Q6ZV73 1430 aa8.12□□□□□ -1.11
CPS1-207ENST00000479988 PHLDB1Q86UU1 1377 aa8.12□□□□□ -1.11
CPS1-207ENST00000479988 TAOK2Q9UL54 1235 aa8.12□□□□□ -1.11
CPS1-207ENST00000479988 CDCA8Q53HL2 280 aa8.12□□□□□ -1.11
CPS1-207ENST00000479988 GTF3C3Q9Y5Q9 886 aa8.12□□□□□ -1.11
CPS1-207ENST00000479988 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.11□□□□□ -1.11
CPS1-207ENST00000479988 MYOM3Q5VTT5 1437 aa8.11□□□□□ -1.11
CPS1-207ENST00000479988 SCAPERQ9BY12 1400 aa8.11□□□□□ -1.11
CPS1-207ENST00000479988 PODXL2Q9NZ53 605 aa8.11□□□□□ -1.11
CPS1-207ENST00000479988 STK26Q9P289 416 aa8.1□□□□□ -1.11
CPS1-207ENST00000479988 PLEKHH2Q8IVE3 1493 aa8.1□□□□□ -1.11
CPS1-207ENST00000479988 ATF3P18847 181 aa8.09□□□□□ -1.11
CPS1-207ENST00000479988 PKD2Q13563 968 aa8.09□□□□□ -1.11
CPS1-207ENST00000479988 EIF4G3O43432 1585 aaKnown RBP8.09□□□□□ -1.11
CPS1-207ENST00000479988 ANKLE2Q86XL3 938 aa8.09□□□□□ -1.11
CPS1-207ENST00000479988 EHBP1L1Q8N3D4 1523 aa8.09□□□□□ -1.11
CPS1-207ENST00000479988 THOC2Q8NI27 1593 aaKnown RBP8.08□□□□□ -1.12
CPS1-207ENST00000479988 AKNAQ7Z591 1439 aa8.08□□□□□ -1.12
CPS1-207ENST00000479988 MIA2Q96PC5 1412 aa8.07□□□□□ -1.12
CPS1-207ENST00000479988 PAK3O75914 559 aaPredicted RBP8.07□□□□□ -1.12
CPS1-207ENST00000479988 SRPK2P78362 688 aaKnown RBP8.07□□□□□ -1.12
CPS1-207ENST00000479988 NCOA2Q15596 1464 aa8.07□□□□□ -1.12
CPS1-207ENST00000479988 PCF11O94913 1555 aaKnown RBP8.07□□□□□ -1.12
CPS1-207ENST00000479988 SIN3AQ96ST3 1273 aa8.07□□□□□ -1.12
CPS1-207ENST00000479988 VGFO15240 615 aaPredicted RBP8.07□□□□□ -1.12
CPS1-207ENST00000479988 TROQ12816 1431 aaPredicted RBP8.07□□□□□ -1.12
CPS1-207ENST00000479988 SAFB2Q14151 953 aaKnown RBP eCLIP8.06□□□□□ -1.12
CPS1-207ENST00000479988 ASXL2Q76L83 1435 aa8.06□□□□□ -1.12
CPS1-207ENST00000479988 EIF4G2P78344 907 aaKnown RBP eCLIP8.06□□□□□ -1.12
CPS1-207ENST00000479988 DDX10Q13206 875 aaKnown RBP8.06□□□□□ -1.12
CPS1-207ENST00000479988 DENND4BO75064 1496 aaPredicted RBP8.06□□□□□ -1.12
CPS1-207ENST00000479988 FOXD1Q16676 465 aa8.06□□□□□ -1.12
CPS1-207ENST00000479988 HECW1Q76N89 1606 aa8.06□□□□□ -1.12
CPS1-207ENST00000479988 TXNDC2Q86VQ3 553 aa8.06□□□□□ -1.12
CPS1-207ENST00000479988 CTTNBP2Q8WZ74 1663 aa8.05□□□□□ -1.12
CPS1-207ENST00000479988 PROSER2Q86WR7 435 aaPredicted RBP8.05□□□□□ -1.12
CPS1-207ENST00000479988 DCAF11Q8TEB1 546 aa8.05□□□□□ -1.12
CPS1-207ENST00000479988 WDR97A6NE52 1622 aa8.05□□□□□ -1.12
CPS1-207ENST00000479988 CSB-PGBD3P0DP91 1061 aa8.04□□□□□ -1.12
CPS1-207ENST00000479988 NUTM2DQ5VT03 806 aaPredicted RBP8.04□□□□□ -1.12
CPS1-207ENST00000479988 NGDNQ8NEJ9 315 aaKnown RBP8.04□□□□□ -1.12
CPS1-207ENST00000479988 HFM1A2PYH4 1435 aa8.04□□□□□ -1.12
CPS1-207ENST00000479988 SUPT6HQ7KZ85 1726 aaKnown RBP8.04□□□□□ -1.12
CPS1-207ENST00000479988 ABCA5Q8WWZ7 1642 aa8.04□□□□□ -1.12
CPS1-207ENST00000479988 CARD11Q9BXL7 1154 aa8.04□□□□□ -1.12
CPS1-207ENST00000479988 PIP4K2BP78356 416 aa8.03□□□□□ -1.12
CPS1-207ENST00000479988 ADGRL1O94910 1474 aa8.03□□□□□ -1.12
CPS1-207ENST00000479988 KIF15Q9NS87 1388 aa8.03□□□□□ -1.12
CPS1-207ENST00000479988 CFAP43Q8NDM7 1665 aa8.02□□□□□ -1.13
CPS1-207ENST00000479988 MPHOSPH9Q99550 1183 aa8.02□□□□□ -1.13
CPS1-207ENST00000479988 CCER2I3L3R5 266 aa8.01□□□□□ -1.13
CPS1-207ENST00000479988 PPM1GO15355 546 aaPredicted RBP8.01□□□□□ -1.13
CPS1-207ENST00000479988 ARHGEF11O15085 1522 aa8.01□□□□□ -1.13
CPS1-207ENST00000479988 EPRSP07814 1512 aaKnown RBP8.01□□□□□ -1.13
CPS1-207ENST00000479988 KLHL34Q8N239 644 aa8.01□□□□□ -1.13
CPS1-207ENST00000479988 SOX12O15370 315 aa8□□□□□ -1.13
CPS1-207ENST00000479988 HDGFL2Q7Z4V5 671 aaPredicted RBP8□□□□□ -1.13
CPS1-207ENST00000479988 NUP160Q12769 1436 aa8□□□□□ -1.13
CPS1-207ENST00000479988 DCAF8L1A6NGE4 600 aa8□□□□□ -1.13
CPS1-207ENST00000479988 NPHP1O15259 732 aa8□□□□□ -1.13
CPS1-207ENST00000479988 PPP6R1Q9UPN7 881 aa8□□□□□ -1.13
CPS1-207ENST00000479988 ZBTB47Q9UFB7 747 aaPredicted RBP8□□□□□ -1.13
CPS1-207ENST00000479988 WDR7Q9Y4E6 1490 aa7.99□□□□□ -1.13
CPS1-207ENST00000479988 ZNF644Q9H582 1327 aaPredicted RBP7.99□□□□□ -1.13
CPS1-207ENST00000479988 ADAMTS12P58397 1594 aa7.99□□□□□ -1.13
CPS1-207ENST00000479988 UGGT2Q9NYU1 1516 aa7.99□□□□□ -1.13
CPS1-207ENST00000479988 FANCAO15360 1455 aa7.99□□□□□ -1.13
CPS1-207ENST00000479988 NUTM2FA1L443 756 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms