RNA–Protein interactions for RNA: ENST00000479412.2

NOTCH2-203, Transcript of notch 2, humanhuman

TSL 1 (best)

Gene NOTCH2, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-203ENST00000479412 RTN4Q9NQC3 1192 aaKnown RBP19.32■□□□□ 0.68
NOTCH2-203ENST00000479412 CCDC18Q5T9S5 1454 aa19.31■□□□□ 0.68
NOTCH2-203ENST00000479412 EHBP1L1Q8N3D4 1523 aa19.3■□□□□ 0.68
NOTCH2-203ENST00000479412 DDX10Q13206 875 aaKnown RBP19.3■□□□□ 0.68
NOTCH2-203ENST00000479412 SUPT6HQ7KZ85 1726 aaKnown RBP19.3■□□□□ 0.68
NOTCH2-203ENST00000479412 MAPKBP1O60336 1514 aa19.29■□□□□ 0.68
NOTCH2-203ENST00000479412 PTPRGP23470 1445 aa19.29■□□□□ 0.68
NOTCH2-203ENST00000479412 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.68
NOTCH2-203ENST00000479412 PTPN23Q9H3S7 1636 aa19.25■□□□□ 0.67
NOTCH2-203ENST00000479412 NUP160Q12769 1436 aa19.25■□□□□ 0.67
NOTCH2-203ENST00000479412 NAIPQ13075 1403 aa19.25■□□□□ 0.67
NOTCH2-203ENST00000479412 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.25■□□□□ 0.67
NOTCH2-203ENST00000479412 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
NOTCH2-203ENST00000479412 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
NOTCH2-203ENST00000479412 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
NOTCH2-203ENST00000479412 RAPGEF6Q8TEU7 1601 aa19.23■□□□□ 0.67
NOTCH2-203ENST00000479412 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
NOTCH2-203ENST00000479412 ERCC6L2Q5T890 1561 aa19.2■□□□□ 0.66
NOTCH2-203ENST00000479412 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
NOTCH2-203ENST00000479412 HFM1A2PYH4 1435 aa19.19■□□□□ 0.66
NOTCH2-203ENST00000479412 ARHGEF11O15085 1522 aa19.18■□□□□ 0.66
NOTCH2-203ENST00000479412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.66
NOTCH2-203ENST00000479412 TROQ12816 1431 aaPredicted RBP19.17■□□□□ 0.66
NOTCH2-203ENST00000479412 KIF14Q15058 1648 aa19.16■□□□□ 0.66
NOTCH2-203ENST00000479412 MYT1LQ9UL68 1186 aa19.16■□□□□ 0.66
NOTCH2-203ENST00000479412 ATP10BO94823 1461 aa19.15■□□□□ 0.66
NOTCH2-203ENST00000479412 KDM6BO15054 1643 aa19.15■□□□□ 0.66
NOTCH2-203ENST00000479412 CHD1O14646 1710 aa19.15■□□□□ 0.66
NOTCH2-203ENST00000479412 PPP1R15AO75807 674 aaPredicted RBP19.13■□□□□ 0.65
NOTCH2-203ENST00000479412 ABCC5O15440 1437 aa19.12■□□□□ 0.65
NOTCH2-203ENST00000479412 FANCIQ9NVI1 1328 aa19.12■□□□□ 0.65
NOTCH2-203ENST00000479412 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
NOTCH2-203ENST00000479412 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
NOTCH2-203ENST00000479412 DAPK1P53355 1430 aa19.11■□□□□ 0.65
NOTCH2-203ENST00000479412 POLR3GLQ9BT43 218 aa19.11■□□□□ 0.65
NOTCH2-203ENST00000479412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.65
NOTCH2-203ENST00000479412 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
NOTCH2-203ENST00000479412 IL27Q8NEV9 243 aa19.09■□□□□ 0.65
NOTCH2-203ENST00000479412 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
NOTCH2-203ENST00000479412 L3MBTL2Q969R5 705 aa19.06■□□□□ 0.64
NOTCH2-203ENST00000479412 CAMSAP2Q08AD1 1489 aa19.06■□□□□ 0.64
NOTCH2-203ENST00000479412 MIA2Q96PC5 1412 aa19.06■□□□□ 0.64
NOTCH2-203ENST00000479412 PKD2Q13563 968 aa19.05■□□□□ 0.64
NOTCH2-203ENST00000479412 KDM2AQ9Y2K7 1162 aa19.05■□□□□ 0.64
NOTCH2-203ENST00000479412 PAK3O75914 559 aaPredicted RBP19.02■□□□□ 0.64
NOTCH2-203ENST00000479412 EIF5BO60841 1220 aaKnown RBP19.01■□□□□ 0.63
NOTCH2-203ENST00000479412 RTL5Q5HYW3 569 aaPredicted RBP19.01■□□□□ 0.63
NOTCH2-203ENST00000479412 TCOF1Q13428 1488 aaKnown RBP19■□□□□ 0.63
NOTCH2-203ENST00000479412 RGL3Q3MIN7 710 aa18.98■□□□□ 0.63
NOTCH2-203ENST00000479412 NUP155O75694 1391 aa18.98■□□□□ 0.63
NOTCH2-203ENST00000479412 ANP32CO43423 234 aa18.98■□□□□ 0.63
NOTCH2-203ENST00000479412 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
NOTCH2-203ENST00000479412 NOP58Q9Y2X3 529 aaKnown RBP18.97■□□□□ 0.63
NOTCH2-203ENST00000479412 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
NOTCH2-203ENST00000479412 ABCA8O94911 1581 aa18.96■□□□□ 0.63
NOTCH2-203ENST00000479412 AFAP1Q8N556 730 aa18.95■□□□□ 0.62
NOTCH2-203ENST00000479412 DENND4BO75064 1496 aaPredicted RBP18.95■□□□□ 0.62
NOTCH2-203ENST00000479412 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
NOTCH2-203ENST00000479412 ANKRD30AQ9BXX3 1397 aa18.94■□□□□ 0.62
NOTCH2-203ENST00000479412 NBPF8Q3BBV2 869 aa18.93■□□□□ 0.62
NOTCH2-203ENST00000479412 HSPA5P11021 654 aaKnown RBP18.93■□□□□ 0.62
NOTCH2-203ENST00000479412 AKNAQ7Z591 1439 aa18.92■□□□□ 0.62
NOTCH2-203ENST00000479412 ANKRD50Q9ULJ7 1429 aa18.92■□□□□ 0.62
NOTCH2-203ENST00000479412 OSCARQ8IYS5 282 aa18.92■□□□□ 0.62
NOTCH2-203ENST00000479412 C9orf84Q5VXU9 1444 aa18.91■□□□□ 0.62
NOTCH2-203ENST00000479412 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
NOTCH2-203ENST00000479412 KIF15Q9NS87 1388 aa18.91■□□□□ 0.62
NOTCH2-203ENST00000479412 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
NOTCH2-203ENST00000479412 SENP3-EIF4A1A0A087X0R7 540 aa18.9■□□□□ 0.62
NOTCH2-203ENST00000479412 DNMT1P26358 1616 aaKnown RBP18.87■□□□□ 0.61
NOTCH2-203ENST00000479412 ABCC10Q5T3U5 1492 aa18.86■□□□□ 0.61
NOTCH2-203ENST00000479412 CYB5RLQ6IPT4 315 aa18.86■□□□□ 0.61
NOTCH2-203ENST00000479412 DCAF11Q8TEB1 546 aa18.84■□□□□ 0.61
NOTCH2-203ENST00000479412 ROCK1Q13464 1354 aa18.84■□□□□ 0.61
NOTCH2-203ENST00000479412 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.61
NOTCH2-203ENST00000479412 ANKRD30BQ9BXX2 1392 aa18.83■□□□□ 0.61
NOTCH2-203ENST00000479412 TIMELESSQ9UNS1 1208 aa18.83■□□□□ 0.61
NOTCH2-203ENST00000479412 C11orf95C9JLR9 678 aaPredicted RBP18.83■□□□□ 0.6
NOTCH2-203ENST00000479412 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.6
NOTCH2-203ENST00000479412 EFCAB2Q5VUJ9 269 aa18.83■□□□□ 0.6
NOTCH2-203ENST00000479412 CDC42BPAQ5VT25 1732 aa18.82■□□□□ 0.6
NOTCH2-203ENST00000479412 SYCP2Q9BX26 1530 aa18.82■□□□□ 0.6
NOTCH2-203ENST00000479412 TTC37Q6PGP7 1564 aa18.82■□□□□ 0.6
NOTCH2-203ENST00000479412 ERICH6BQ5W0A0 696 aa18.81■□□□□ 0.6
NOTCH2-203ENST00000479412 NPM2Q86SE8 214 aaKnown RBP18.79■□□□□ 0.6
NOTCH2-203ENST00000479412 GCC2Q8IWJ2 1684 aa18.78■□□□□ 0.6
NOTCH2-203ENST00000479412 ABCC2Q92887 1545 aa18.78■□□□□ 0.6
NOTCH2-203ENST00000479412 ZBTB47Q9UFB7 747 aaPredicted RBP18.78■□□□□ 0.6
NOTCH2-203ENST00000479412 PPP4R2Q9NY27 417 aa18.78■□□□□ 0.6
NOTCH2-203ENST00000479412 ITSN2Q9NZM3 1697 aa18.78■□□□□ 0.6
NOTCH2-203ENST00000479412 PZPP20742 1482 aa18.78■□□□□ 0.6
NOTCH2-203ENST00000479412 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.77■□□□□ 0.6
NOTCH2-203ENST00000479412 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
NOTCH2-203ENST00000479412 UBE2Q2Q8WVN8 375 aa18.76■□□□□ 0.59
NOTCH2-203ENST00000479412 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
NOTCH2-203ENST00000479412 MBD5Q9P267 1494 aa18.75■□□□□ 0.59
NOTCH2-203ENST00000479412 ANP32AP39687 249 aaKnown RBP18.75■□□□□ 0.59
NOTCH2-203ENST00000479412 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
NOTCH2-203ENST00000479412 SAMD9LQ8IVG5 1584 aa18.74■□□□□ 0.59
NOTCH2-203ENST00000479412 TRAPPC8Q9Y2L5 1435 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms