RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 CCDC9Q9Y3X0 531 aaKnown RBP13.99□□□□□ -0.17
NUP35-209ENST00000479162 ANP32AP39687 249 aaKnown RBP13.98□□□□□ -0.17
NUP35-209ENST00000479162 ZNF830Q96NB3 372 aaPredicted RBP13.98□□□□□ -0.17
NUP35-209ENST00000479162 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
NUP35-209ENST00000479162 KCNG1Q9UIX4 513 aa13.96□□□□□ -0.17
NUP35-209ENST00000479162 POLA1P09884 1462 aaPredicted RBP13.96□□□□□ -0.17
NUP35-209ENST00000479162 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
NUP35-209ENST00000479162 ABCA5Q8WWZ7 1642 aa13.95□□□□□ -0.18
NUP35-209ENST00000479162 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
NUP35-209ENST00000479162 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
NUP35-209ENST00000479162 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
NUP35-209ENST00000479162 TMEM51Q9NW97 253 aa13.92□□□□□ -0.18
NUP35-209ENST00000479162 TICAM2Q86XR7 235 aa13.91□□□□□ -0.18
NUP35-209ENST00000479162 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
NUP35-209ENST00000479162 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.91□□□□□ -0.18
NUP35-209ENST00000479162 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
NUP35-209ENST00000479162 RGS22Q8NE09 1264 aa13.9□□□□□ -0.18
NUP35-209ENST00000479162 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
NUP35-209ENST00000479162 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
NUP35-209ENST00000479162 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
NUP35-209ENST00000479162 RRAGDQ9NQL2 400 aaPredicted RBP13.87□□□□□ -0.19
NUP35-209ENST00000479162 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
NUP35-209ENST00000479162 IGSF3O75054 1194 aa13.86□□□□□ -0.19
NUP35-209ENST00000479162 SMAP1Q8IYB5 467 aaPredicted RBP13.86□□□□□ -0.19
NUP35-209ENST00000479162 VGLL3A8MV65 326 aa13.85□□□□□ -0.19
NUP35-209ENST00000479162 IRX3P78415 501 aaPredicted RBP13.85□□□□□ -0.19
NUP35-209ENST00000479162 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
NUP35-209ENST00000479162 PTMAP06454 111 aaKnown RBP13.83□□□□□ -0.2
NUP35-209ENST00000479162 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
NUP35-209ENST00000479162 FAM193AP78312 1265 aa13.83□□□□□ -0.2
NUP35-209ENST00000479162 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
NUP35-209ENST00000479162 CLGNO14967 610 aa13.82□□□□□ -0.2
NUP35-209ENST00000479162 FRAT1Q92837 279 aaPredicted RBP13.82□□□□□ -0.2
NUP35-209ENST00000479162 SOGA1O94964 1423 aa13.82□□□□□ -0.2
NUP35-209ENST00000479162 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
NUP35-209ENST00000479162 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
NUP35-209ENST00000479162 CFAP44Q96MT7 982 aa13.82□□□□□ -0.2
NUP35-209ENST00000479162 GRIPAP1Q4V328 841 aa13.81□□□□□ -0.2
NUP35-209ENST00000479162 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
NUP35-209ENST00000479162 CUL7Q14999 1698 aa13.8□□□□□ -0.2
NUP35-209ENST00000479162 LAS1LQ9Y4W2 734 aaKnown RBP13.79□□□□□ -0.2
NUP35-209ENST00000479162 PATL2C9JE40 543 aaKnown RBP13.79□□□□□ -0.2
NUP35-209ENST00000479162 TMED8Q6PL24 325 aaPredicted RBP13.78□□□□□ -0.2
NUP35-209ENST00000479162 ANP32BQ92688 251 aaKnown RBP13.78□□□□□ -0.2
NUP35-209ENST00000479162 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
NUP35-209ENST00000479162 CLSTN1O94985 981 aa13.78□□□□□ -0.2
NUP35-209ENST00000479162 TPM2P07951 284 aa13.78□□□□□ -0.2
NUP35-209ENST00000479162 ZNF592Q92610 1267 aa13.78□□□□□ -0.2
NUP35-209ENST00000479162 UTP14CQ5TAP6 766 aaKnown RBP13.77□□□□□ -0.2
NUP35-209ENST00000479162 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
NUP35-209ENST00000479162 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.21
NUP35-209ENST00000479162 CLCN1P35523 988 aa13.77□□□□□ -0.21
NUP35-209ENST00000479162 ADAMTS12P58397 1594 aa13.76□□□□□ -0.21
NUP35-209ENST00000479162 PPP4R3BQ5MIZ7 849 aa13.76□□□□□ -0.21
NUP35-209ENST00000479162 MMP14P50281 582 aa13.75□□□□□ -0.21
NUP35-209ENST00000479162 PLCD4Q9BRC7 762 aa13.75□□□□□ -0.21
NUP35-209ENST00000479162 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
NUP35-209ENST00000479162 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
NUP35-209ENST00000479162 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
NUP35-209ENST00000479162 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
NUP35-209ENST00000479162 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.21
NUP35-209ENST00000479162 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
NUP35-209ENST00000479162 PPP4R2Q9NY27 417 aa13.72□□□□□ -0.21
NUP35-209ENST00000479162 MAP7D2Q96T17 732 aa13.72□□□□□ -0.21
NUP35-209ENST00000479162 APPP05067 770 aa13.72□□□□□ -0.21
NUP35-209ENST00000479162 TNNT2P45379 298 aaPredicted RBP13.72□□□□□ -0.21
NUP35-209ENST00000479162 FAM43BQ6ZT52 329 aaPredicted RBP13.72□□□□□ -0.21
NUP35-209ENST00000479162 MCCP23508 829 aa13.71□□□□□ -0.22
NUP35-209ENST00000479162 CHD1O14646 1710 aa13.7□□□□□ -0.22
NUP35-209ENST00000479162 PTMSP20962 102 aa13.7□□□□□ -0.22
NUP35-209ENST00000479162 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
NUP35-209ENST00000479162 SYNJ2O15056 1496 aa13.69□□□□□ -0.22
NUP35-209ENST00000479162 EEA1Q15075 1411 aa13.69□□□□□ -0.22
NUP35-209ENST00000479162 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
NUP35-209ENST00000479162 ARID3AQ99856 593 aa13.68□□□□□ -0.22
NUP35-209ENST00000479162 DMTNQ08495 405 aa13.68□□□□□ -0.22
NUP35-209ENST00000479162 SLC52A1Q9NWF4 448 aa13.68□□□□□ -0.22
NUP35-209ENST00000479162 DNTTIP2Q5QJE6 756 aaKnown RBP13.67□□□□□ -0.22
NUP35-209ENST00000479162 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
NUP35-209ENST00000479162 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
NUP35-209ENST00000479162 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
NUP35-209ENST00000479162 KCNH8Q96L42 1107 aa13.65□□□□□ -0.22
NUP35-209ENST00000479162 FHAD1B1AJZ9 1412 aa13.65□□□□□ -0.22
NUP35-209ENST00000479162 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
NUP35-209ENST00000479162 TAF3Q5VWG9 929 aa13.63□□□□□ -0.23
NUP35-209ENST00000479162 KIF20AO95235 890 aa13.63□□□□□ -0.23
NUP35-209ENST00000479162 PHF14O94880 888 aa13.63□□□□□ -0.23
NUP35-209ENST00000479162 PSEN1P49768 467 aa13.63□□□□□ -0.23
NUP35-209ENST00000479162 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.234e-6■■■□□ 15.5
NUP35-209ENST00000479162 SHROOM2Q13796 1616 aa13.62□□□□□ -0.23
NUP35-209ENST00000479162 PUS7Q96PZ0 661 aaKnown RBP13.62□□□□□ -0.23
NUP35-209ENST00000479162 NFKBIBQ15653 356 aa13.61□□□□□ -0.23
NUP35-209ENST00000479162 PSMD1Q99460 953 aa13.6□□□□□ -0.23
NUP35-209ENST00000479162 NUP160Q12769 1436 aa13.6□□□□□ -0.23
NUP35-209ENST00000479162 E9PSI1 815 aa13.59□□□□□ -0.23
NUP35-209ENST00000479162 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
NUP35-209ENST00000479162 GRIN2AQ12879 1464 aa13.58□□□□□ -0.23
NUP35-209ENST00000479162 SOX12O15370 315 aa13.57□□□□□ -0.24
NUP35-209ENST00000479162 KIF21BO75037 1637 aa13.56□□□□□ -0.24
NUP35-209ENST00000479162 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms