RNA–Protein interactions for RNA: ENST00000478993.5

DDX3X-204, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 1 (best)

Gene DDX3X, Length 3,397 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-204ENST00000478993 EPRSP07814 1512 aaKnown RBP13.36□□□□□ -0.27
DDX3X-204ENST00000478993 KIF14Q15058 1648 aa13.36□□□□□ -0.27
DDX3X-204ENST00000478993 KDM5CP41229 1560 aa13.36□□□□□ -0.27
DDX3X-204ENST00000478993 TONSLQ96HA7 1378 aa13.35□□□□□ -0.27
DDX3X-204ENST00000478993 IQGAP2Q13576 1575 aa13.35□□□□□ -0.27
DDX3X-204ENST00000478993 GAPVD1Q14C86 1478 aa13.34□□□□□ -0.27
DDX3X-204ENST00000478993 ANKRD30BQ9BXX2 1392 aa13.34□□□□□ -0.27
DDX3X-204ENST00000478993 ITGAEP38570 1179 aa13.31□□□□□ -0.28
DDX3X-204ENST00000478993 CCDC7Q96M83 1385 aa13.31□□□□□ -0.28
DDX3X-204ENST00000478993 ADGRL2O95490 1459 aa13.31□□□□□ -0.28
DDX3X-204ENST00000478993 DHX29Q7Z478 1369 aaKnown RBP13.3□□□□□ -0.28
DDX3X-204ENST00000478993 FAM50AQ14320 339 aaKnown RBP13.3□□□□□ -0.28
DDX3X-204ENST00000478993 KDM5DQ9BY66 1539 aa13.3□□□□□ -0.28
DDX3X-204ENST00000478993 PZPP20742 1482 aa13.29□□□□□ -0.28
DDX3X-204ENST00000478993 ZBED9Q6R2W3 1325 aa13.29□□□□□ -0.28
DDX3X-204ENST00000478993 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
DDX3X-204ENST00000478993 MTUS2Q5JR59 1369 aa13.28□□□□□ -0.28
DDX3X-204ENST00000478993 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
DDX3X-204ENST00000478993 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
DDX3X-204ENST00000478993 SMG6Q86US8 1419 aaKnown RBP13.27□□□□□ -0.28
DDX3X-204ENST00000478993 DAPK1P53355 1430 aa13.27□□□□□ -0.29
DDX3X-204ENST00000478993 UHRF1BP1Q6BDS2 1440 aa13.27□□□□□ -0.29
DDX3X-204ENST00000478993 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
DDX3X-204ENST00000478993 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
DDX3X-204ENST00000478993 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
DDX3X-204ENST00000478993 ABCC5O15440 1437 aa13.25□□□□□ -0.29
DDX3X-204ENST00000478993 DISP1Q96F81 1524 aa13.25□□□□□ -0.29
DDX3X-204ENST00000478993 BCANQ96GW7 911 aa13.24□□□□□ -0.29
DDX3X-204ENST00000478993 CDC42BPAQ5VT25 1732 aa13.24□□□□□ -0.29
DDX3X-204ENST00000478993 PRKRIP1Q9H875 184 aaPredicted RBP13.24□□□□□ -0.29
DDX3X-204ENST00000478993 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
DDX3X-204ENST00000478993 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
DDX3X-204ENST00000478993 LAMC1P11047 1609 aa13.23□□□□□ -0.29
DDX3X-204ENST00000478993 CDK13Q14004 1512 aaKnown RBP13.23□□□□□ -0.29
DDX3X-204ENST00000478993 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
DDX3X-204ENST00000478993 HIRIP3Q9BW71 556 aaPredicted RBP13.23□□□□□ -0.29
DDX3X-204ENST00000478993 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
DDX3X-204ENST00000478993 ZMYM4Q5VZL5 1548 aa13.22□□□□□ -0.29
DDX3X-204ENST00000478993 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
DDX3X-204ENST00000478993 ARHGEF12Q9NZN5 1544 aa13.22□□□□□ -0.29
DDX3X-204ENST00000478993 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
DDX3X-204ENST00000478993 NEFLP07196 543 aa13.21□□□□□ -0.29
DDX3X-204ENST00000478993 NUP153P49790 1475 aaKnown RBP13.21□□□□□ -0.3
DDX3X-204ENST00000478993 ARID4BQ4LE39 1312 aaPredicted RBP13.19□□□□□ -0.3
DDX3X-204ENST00000478993 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
DDX3X-204ENST00000478993 ZBTB22O15209 634 aa13.18□□□□□ -0.3
DDX3X-204ENST00000478993 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
DDX3X-204ENST00000478993 RALGAPBQ86X10 1494 aa13.18□□□□□ -0.3
DDX3X-204ENST00000478993 NBPF8Q3BBV2 869 aa13.17□□□□□ -0.3
DDX3X-204ENST00000478993 MPHOSPH9Q99550 1183 aa13.17□□□□□ -0.3
DDX3X-204ENST00000478993 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
DDX3X-204ENST00000478993 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
DDX3X-204ENST00000478993 PTPRGP23470 1445 aa13.16□□□□□ -0.3
DDX3X-204ENST00000478993 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
DDX3X-204ENST00000478993 KIF7Q2M1P5 1343 aa13.15□□□□□ -0.3
DDX3X-204ENST00000478993 TRPM1Q7Z4N2 1603 aa13.15□□□□□ -0.3
DDX3X-204ENST00000478993 INSRP06213 1382 aa13.15□□□□□ -0.3
DDX3X-204ENST00000478993 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
DDX3X-204ENST00000478993 HNRNPUQ00839 825 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDX3X-204ENST00000478993 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
DDX3X-204ENST00000478993 KIAA0586Q9BVV6 1533 aa13.12□□□□□ -0.31
DDX3X-204ENST00000478993 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
DDX3X-204ENST00000478993 CAMSAP2Q08AD1 1489 aa13.12□□□□□ -0.31
DDX3X-204ENST00000478993 ARHGEF5Q12774 1597 aa13.11□□□□□ -0.31
DDX3X-204ENST00000478993 CDK11AQ9UQ88 783 aaPredicted RBP13.11□□□□□ -0.31
DDX3X-204ENST00000478993 KIAA1107Q9UPP5 1409 aa13.1□□□□□ -0.31
DDX3X-204ENST00000478993 KTN1Q86UP2 1357 aaKnown RBP13.09□□□□□ -0.31
DDX3X-204ENST00000478993 GPATCH8Q9UKJ3 1502 aaKnown RBP13.09□□□□□ -0.31
DDX3X-204ENST00000478993 ABCA8O94911 1581 aa13.09□□□□□ -0.31
DDX3X-204ENST00000478993 ABCC10Q5T3U5 1492 aa13.09□□□□□ -0.31
DDX3X-204ENST00000478993 RNF17Q9BXT8 1623 aaKnown RBP13.08□□□□□ -0.32
DDX3X-204ENST00000478993 UNC13BO14795 1591 aa13.07□□□□□ -0.32
DDX3X-204ENST00000478993 ZNF608Q9ULD9 1512 aaPredicted RBP13.07□□□□□ -0.32
DDX3X-204ENST00000478993 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
DDX3X-204ENST00000478993 MYO5CQ9NQX4 1742 aa13.07□□□□□ -0.32
DDX3X-204ENST00000478993 MAST1Q9Y2H9 1570 aa13.06□□□□□ -0.32
DDX3X-204ENST00000478993 VIRMAQ69YN4 1812 aaKnown RBP13.05□□□□□ -0.32
DDX3X-204ENST00000478993 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
DDX3X-204ENST00000478993 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
DDX3X-204ENST00000478993 ROCK2O75116 1388 aaKnown RBP13.04□□□□□ -0.32
DDX3X-204ENST00000478993 PRDM15P57071 1507 aaPredicted RBP13.03□□□□□ -0.32
DDX3X-204ENST00000478993 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
DDX3X-204ENST00000478993 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.32
DDX3X-204ENST00000478993 RRP7BPQ9NSQ0 103 aa13.02□□□□□ -0.32
DDX3X-204ENST00000478993 NUDCQ9Y266 331 aa13.02□□□□□ -0.32
DDX3X-204ENST00000478993 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.33
DDX3X-204ENST00000478993 GRIN2AQ12879 1464 aa13.01□□□□□ -0.33
DDX3X-204ENST00000478993 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
DDX3X-204ENST00000478993 SYNJ2O15056 1496 aa13□□□□□ -0.33
DDX3X-204ENST00000478993 USP47Q96K76 1375 aa13□□□□□ -0.33
DDX3X-204ENST00000478993 BLMP54132 1417 aaPredicted RBP12.99□□□□□ -0.33
DDX3X-204ENST00000478993 BRD4O60885 1362 aaPredicted RBP12.99□□□□□ -0.33
DDX3X-204ENST00000478993 GPRASP1Q5JY77 1395 aa12.99□□□□□ -0.33
DDX3X-204ENST00000478993 CLASP1Q7Z460 1538 aa12.99□□□□□ -0.33
DDX3X-204ENST00000478993 MAGI2Q86UL8 1455 aa12.99□□□□□ -0.33
DDX3X-204ENST00000478993 PREX2Q70Z35 1606 aa12.99□□□□□ -0.33
DDX3X-204ENST00000478993 IQGAP3Q86VI3 1631 aa12.99□□□□□ -0.33
DDX3X-204ENST00000478993 PARD3Q8TEW0 1356 aa12.99□□□□□ -0.33
DDX3X-204ENST00000478993 IRX6P78412 446 aaPredicted RBP12.98□□□□□ -0.33
DDX3X-204ENST00000478993 ATP10AO60312 1499 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms