RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
CCDC78-210ENST00000478979 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
CCDC78-210ENST00000478979 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-210ENST00000478979 DENND4BO75064 1496 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-210ENST00000478979 DISP1Q96F81 1524 aa19.53■□□□□ 0.72
CCDC78-210ENST00000478979 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-210ENST00000478979 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-210ENST00000478979 NUP153P49790 1475 aaKnown RBP19.52■□□□□ 0.72
CCDC78-210ENST00000478979 PLB1Q6P1J6 1458 aa19.52■□□□□ 0.71
CCDC78-210ENST00000478979 GRIN2AQ12879 1464 aa19.51■□□□□ 0.71
CCDC78-210ENST00000478979 WASHC2AQ641Q2 1341 aa19.51■□□□□ 0.71
CCDC78-210ENST00000478979 CCER2I3L3R5 266 aa19.51■□□□□ 0.71
CCDC78-210ENST00000478979 TCOF1Q13428 1488 aaKnown RBP19.51■□□□□ 0.71
CCDC78-210ENST00000478979 EIF4G3O43432 1585 aaKnown RBP19.51■□□□□ 0.71
CCDC78-210ENST00000478979 KIAA0586Q9BVV6 1533 aa19.51■□□□□ 0.71
CCDC78-210ENST00000478979 KIAA0556O60303 1618 aa19.5■□□□□ 0.71
CCDC78-210ENST00000478979 EIF4G2P78344 907 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCDC78-210ENST00000478979 DAPK1P53355 1430 aa19.49■□□□□ 0.71
CCDC78-210ENST00000478979 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
CCDC78-210ENST00000478979 KDM5BQ9UGL1 1544 aa19.48■□□□□ 0.71
CCDC78-210ENST00000478979 MIA2Q96PC5 1412 aa19.47■□□□□ 0.71
CCDC78-210ENST00000478979 C11orf95C9JLR9 678 aaPredicted RBP19.47■□□□□ 0.71
CCDC78-210ENST00000478979 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
CCDC78-210ENST00000478979 ABCC5O15440 1437 aa19.47■□□□□ 0.71
CCDC78-210ENST00000478979 IRX6P78412 446 aaPredicted RBP19.46■□□□□ 0.71
CCDC78-210ENST00000478979 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
CCDC78-210ENST00000478979 DEKP35659 375 aaKnown RBP19.45■□□□□ 0.7
CCDC78-210ENST00000478979 GCC2Q8IWJ2 1684 aa19.45■□□□□ 0.7
CCDC78-210ENST00000478979 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
CCDC78-210ENST00000478979 CCDC184Q52MB2 194 aa19.44■□□□□ 0.7
CCDC78-210ENST00000478979 RAPGEF6Q8TEU7 1601 aa19.44■□□□□ 0.7
CCDC78-210ENST00000478979 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
CCDC78-210ENST00000478979 FAM9BQ8IZU0 186 aa19.4■□□□□ 0.7
CCDC78-210ENST00000478979 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
CCDC78-210ENST00000478979 KIF14Q15058 1648 aa19.37■□□□□ 0.69
CCDC78-210ENST00000478979 PKD2Q13563 968 aa19.37■□□□□ 0.69
CCDC78-210ENST00000478979 ANKRD30BQ9BXX2 1392 aa19.37■□□□□ 0.69
CCDC78-210ENST00000478979 PLEKHD1A6NEE1 506 aa19.36■□□□□ 0.69
CCDC78-210ENST00000478979 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
CCDC78-210ENST00000478979 CAMSAP2Q08AD1 1489 aa19.36■□□□□ 0.69
CCDC78-210ENST00000478979 AKNAQ7Z591 1439 aa19.34■□□□□ 0.69
CCDC78-210ENST00000478979 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
CCDC78-210ENST00000478979 KDM2AQ9Y2K7 1162 aa19.33■□□□□ 0.69
CCDC78-210ENST00000478979 SYNJ2O15056 1496 aa19.33■□□□□ 0.69
CCDC78-210ENST00000478979 HNRNPMP52272 730 aaKnown RBP eCLIP19.33■□□□□ 0.69
CCDC78-210ENST00000478979 CARMIL2Q6F5E8 1435 aa19.32■□□□□ 0.68
CCDC78-210ENST00000478979 GPATCH8Q9UKJ3 1502 aaKnown RBP19.31■□□□□ 0.68
CCDC78-210ENST00000478979 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
CCDC78-210ENST00000478979 ROCK1Q13464 1354 aa19.31■□□□□ 0.68
CCDC78-210ENST00000478979 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-210ENST00000478979 RPRD2Q5VT52 1461 aaKnown RBP19.29■□□□□ 0.68
CCDC78-210ENST00000478979 CCDC7Q96M83 1385 aa19.29■□□□□ 0.68
CCDC78-210ENST00000478979 NCOA1Q15788 1441 aa19.28■□□□□ 0.68
CCDC78-210ENST00000478979 KIF7Q2M1P5 1343 aa19.28■□□□□ 0.68
CCDC78-210ENST00000478979 NUP155O75694 1391 aa19.26■□□□□ 0.67
CCDC78-210ENST00000478979 CNTLNQ9NXG0 1405 aa19.26■□□□□ 0.67
CCDC78-210ENST00000478979 PRKRIP1Q9H875 184 aaPredicted RBP19.26■□□□□ 0.67
CCDC78-210ENST00000478979 TSPY4P0CV99 314 aa19.25■□□□□ 0.67
CCDC78-210ENST00000478979 TSPY10P0CW01 314 aa19.25■□□□□ 0.67
CCDC78-210ENST00000478979 PZPP20742 1482 aa19.25■□□□□ 0.67
CCDC78-210ENST00000478979 NBR1Q14596 966 aa19.25■□□□□ 0.67
CCDC78-210ENST00000478979 ANO8Q9HCE9 1232 aaPredicted RBP19.25■□□□□ 0.67
CCDC78-210ENST00000478979 TEX14Q8IWB6 1497 aa19.24■□□□□ 0.67
CCDC78-210ENST00000478979 PPP4R2Q9NY27 417 aa19.24■□□□□ 0.67
CCDC78-210ENST00000478979 ANKRD30AQ9BXX3 1397 aa19.24■□□□□ 0.67
CCDC78-210ENST00000478979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.67
CCDC78-210ENST00000478979 ANKRD50Q9ULJ7 1429 aa19.22■□□□□ 0.67
CCDC78-210ENST00000478979 NOP58Q9Y2X3 529 aaKnown RBP19.21■□□□□ 0.67
CCDC78-210ENST00000478979 ERICH6BQ5W0A0 696 aa19.21■□□□□ 0.67
CCDC78-210ENST00000478979 ATP10BO94823 1461 aa19.2■□□□□ 0.66
CCDC78-210ENST00000478979 RGL3Q3MIN7 710 aa19.19■□□□□ 0.66
CCDC78-210ENST00000478979 NUP160Q12769 1436 aa19.18■□□□□ 0.66
CCDC78-210ENST00000478979 ITSN2Q9NZM3 1697 aa19.18■□□□□ 0.66
CCDC78-210ENST00000478979 DCAF11Q8TEB1 546 aa19.18■□□□□ 0.66
CCDC78-210ENST00000478979 PAK3O75914 559 aaPredicted RBP19.17■□□□□ 0.66
CCDC78-210ENST00000478979 KIAA1107Q9UPP5 1409 aa19.17■□□□□ 0.66
CCDC78-210ENST00000478979 C9orf84Q5VXU9 1444 aa19.17■□□□□ 0.66
CCDC78-210ENST00000478979 B4GALNT3Q6L9W6 998 aa19.17■□□□□ 0.66
CCDC78-210ENST00000478979 USP47Q96K76 1375 aa19.17■□□□□ 0.66
CCDC78-210ENST00000478979 PTPRGP23470 1445 aa19.16■□□□□ 0.66
CCDC78-210ENST00000478979 CARD11Q9BXL7 1154 aa19.16■□□□□ 0.66
CCDC78-210ENST00000478979 KIF15Q9NS87 1388 aa19.13■□□□□ 0.65
CCDC78-210ENST00000478979 CDC42BPAQ5VT25 1732 aa19.13■□□□□ 0.65
CCDC78-210ENST00000478979 ADGBQ8N7X0 1667 aa19.11■□□□□ 0.65
CCDC78-210ENST00000478979 SPATA31E1Q6ZUB1 1445 aa19.11■□□□□ 0.65
CCDC78-210ENST00000478979 SALL2Q9Y467 1007 aaPredicted RBP19.1■□□□□ 0.65
CCDC78-210ENST00000478979 ST20-MTHFSA0A0A6YYL1 179 aa19.09■□□□□ 0.65
CCDC78-210ENST00000478979 ABCA8O94911 1581 aa19.08■□□□□ 0.65
CCDC78-210ENST00000478979 ABCC10Q5T3U5 1492 aa19.07■□□□□ 0.64
CCDC78-210ENST00000478979 CROCC2H7BZ55 1655 aa19.07■□□□□ 0.64
CCDC78-210ENST00000478979 ADCY10Q96PN6 1610 aa19.06■□□□□ 0.64
CCDC78-210ENST00000478979 ADGRL2O95490 1459 aa19.06■□□□□ 0.64
CCDC78-210ENST00000478979 BCORL1Q5H9F3 1711 aa19.05■□□□□ 0.64
CCDC78-210ENST00000478979 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
CCDC78-210ENST00000478979 NBPF1Q3BBV0 1214 aa19■□□□□ 0.63
CCDC78-210ENST00000478979 TMC1Q8TDI8 760 aa19■□□□□ 0.63
CCDC78-210ENST00000478979 IL27Q8NEV9 243 aa19■□□□□ 0.63
CCDC78-210ENST00000478979 MBD5Q9P267 1494 aa19■□□□□ 0.63
CCDC78-210ENST00000478979 ROCK2O75116 1388 aaKnown RBP18.99■□□□□ 0.63
CCDC78-210ENST00000478979 ARHGAP5Q13017 1502 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms