RNA–Protein interactions for RNA: ENST00000478974.1

ITGB8-204, Transcript of integrin subunit beta 8, humanhuman

TSL 1 (best)

Gene ITGB8, Length 2,054 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-204ENST00000478974 ABCC2Q92887 1545 aa36.13■■■■□ 3.37
ITGB8-204ENST00000478974 SIN3AQ96ST3 1273 aa36.12■■■■□ 3.37
ITGB8-204ENST00000478974 AKNAQ7Z591 1439 aa36.12■■■■□ 3.37
ITGB8-204ENST00000478974 KDM6BO15054 1643 aa36.12■■■■□ 3.37
ITGB8-204ENST00000478974 ZNF777Q9ULD5 760 aaPredicted RBP36.12■■■■□ 3.37
ITGB8-204ENST00000478974 NEUROD1Q13562 356 aa36.03■■■■□ 3.36
ITGB8-204ENST00000478974 ROCK1Q13464 1354 aa36.03■■■■□ 3.36
ITGB8-204ENST00000478974 DIEXFQ68CQ4 756 aaKnown RBP35.99■■■■□ 3.35
ITGB8-204ENST00000478974 UHRF1BP1LA0JNW5 1464 aa35.95■■■■□ 3.35
ITGB8-204ENST00000478974 ZCCHC11Q5TAX3 1644 aaKnown RBP35.93■■■■□ 3.34
ITGB8-204ENST00000478974 CROCC2H7BZ55 1655 aa35.92■■■■□ 3.34
ITGB8-204ENST00000478974 TRIM52Q96A61 297 aa35.92■■■■□ 3.34
ITGB8-204ENST00000478974 CDC42BPBQ9Y5S2 1711 aa35.91■■■■□ 3.34
ITGB8-204ENST00000478974 DENND4BO75064 1496 aaPredicted RBP35.89■■■■□ 3.34
ITGB8-204ENST00000478974 KDM5BQ9UGL1 1544 aa35.88■■■■□ 3.33
ITGB8-204ENST00000478974 TTC37Q6PGP7 1564 aa35.88■■■■□ 3.33
ITGB8-204ENST00000478974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.88■■■■□ 3.33
ITGB8-204ENST00000478974 NCOA1Q15788 1441 aa35.87■■■■□ 3.33
ITGB8-204ENST00000478974 PREX2Q70Z35 1606 aa35.86■■■■□ 3.33
ITGB8-204ENST00000478974 ADGBQ8N7X0 1667 aa35.86■■■■□ 3.33
ITGB8-204ENST00000478974 OSCARQ8IYS5 282 aa35.85■■■■□ 3.33
ITGB8-204ENST00000478974 KCNH8Q96L42 1107 aa35.85■■■■□ 3.33
ITGB8-204ENST00000478974 HNRNPMP52272 730 aaKnown RBP eCLIP35.82■■■■□ 3.33
ITGB8-204ENST00000478974 ADGRL2O95490 1459 aa35.82■■■■□ 3.32
ITGB8-204ENST00000478974 SAMD9LQ8IVG5 1584 aa35.81■■■■□ 3.32
ITGB8-204ENST00000478974 MPHOSPH9Q99550 1183 aa35.79■■■■□ 3.32
ITGB8-204ENST00000478974 TIMELESSQ9UNS1 1208 aa35.77■■■■□ 3.32
ITGB8-204ENST00000478974 MBD5Q9P267 1494 aa35.77■■■■□ 3.32
ITGB8-204ENST00000478974 ANKRD30AQ9BXX3 1397 aa35.74■■■■□ 3.31
ITGB8-204ENST00000478974 C9orf84Q5VXU9 1444 aa35.73■■■■□ 3.31
ITGB8-204ENST00000478974 ARHGEF5Q12774 1597 aa35.72■■■■□ 3.31
ITGB8-204ENST00000478974 ARHGAP5Q13017 1502 aa35.72■■■■□ 3.31
ITGB8-204ENST00000478974 SHANK2Q9UPX8 1470 aa35.72■■■■□ 3.31
ITGB8-204ENST00000478974 MYO5CQ9NQX4 1742 aa35.71■■■■□ 3.31
ITGB8-204ENST00000478974 PPP1R15AO75807 674 aaPredicted RBP35.69■■■■□ 3.3
ITGB8-204ENST00000478974 FOXD1Q16676 465 aa35.69■■■■□ 3.3
ITGB8-204ENST00000478974 TSPY4P0CV99 314 aa35.68■■■■□ 3.3
ITGB8-204ENST00000478974 TSPY10P0CW01 314 aa35.68■■■■□ 3.3
ITGB8-204ENST00000478974 TONSLQ96HA7 1378 aa35.64■■■■□ 3.3
ITGB8-204ENST00000478974 SYCP2Q9BX26 1530 aa35.63■■■■□ 3.29
ITGB8-204ENST00000478974 CCDC141Q6ZP82 1450 aa35.63■■■■□ 3.29
ITGB8-204ENST00000478974 ACIN1Q9UKV3 1341 aaKnown RBP35.62■■■■□ 3.29
ITGB8-204ENST00000478974 ANKRD50Q9ULJ7 1429 aa35.61■■■■□ 3.29
ITGB8-204ENST00000478974 PLCH2O75038 1416 aa35.6■■■■□ 3.29
ITGB8-204ENST00000478974 PZPP20742 1482 aa35.59■■■■□ 3.29
ITGB8-204ENST00000478974 SLC4A1APQ9BWU0 796 aaKnown RBP35.58■■■■□ 3.29
ITGB8-204ENST00000478974 RSPH4AQ5TD94 716 aa35.56■■■■□ 3.28
ITGB8-204ENST00000478974 ARHGEF12Q9NZN5 1544 aa35.54■■■■□ 3.28
ITGB8-204ENST00000478974 WDR7Q9Y4E6 1490 aa35.54■■■■□ 3.28
ITGB8-204ENST00000478974 KIF15Q9NS87 1388 aa35.54■■■■□ 3.28
ITGB8-204ENST00000478974 ANKRD30BQ9BXX2 1392 aa35.53■■■■□ 3.28
ITGB8-204ENST00000478974 KIAA1107Q9UPP5 1409 aa35.52■■■■□ 3.28
ITGB8-204ENST00000478974 EFCAB2Q5VUJ9 269 aa35.49■■■■□ 3.27
ITGB8-204ENST00000478974 PLEKHH2Q8IVE3 1493 aa35.48■■■■□ 3.27
ITGB8-204ENST00000478974 MAST1Q9Y2H9 1570 aa35.45■■■■□ 3.27
ITGB8-204ENST00000478974 ASXL2Q76L83 1435 aa35.44■■■■□ 3.26
ITGB8-204ENST00000478974 MIER1Q8N108 512 aa35.42■■■■□ 3.26
ITGB8-204ENST00000478974 ABCC1P33527 1531 aa35.4■■■■□ 3.26
ITGB8-204ENST00000478974 NUP155O75694 1391 aa35.39■■■■□ 3.26
ITGB8-204ENST00000478974 PKD2Q13563 968 aa35.38■■■■□ 3.25
ITGB8-204ENST00000478974 RPRD2Q5VT52 1461 aaKnown RBP35.37■■■■□ 3.25
ITGB8-204ENST00000478974 ABCA9Q8IUA7 1624 aa35.36■■■■□ 3.25
ITGB8-204ENST00000478974 TRAPPC8Q9Y2L5 1435 aa35.36■■■■□ 3.25
ITGB8-204ENST00000478974 ARAP3Q8WWN8 1544 aa35.36■■■■□ 3.25
ITGB8-204ENST00000478974 L3MBTL2Q969R5 705 aa35.34■■■■□ 3.25
ITGB8-204ENST00000478974 KDM5DQ9BY66 1539 aa35.33■■■■□ 3.25
ITGB8-204ENST00000478974 HIRIP3Q9BW71 556 aaPredicted RBP35.33■■■■□ 3.25
ITGB8-204ENST00000478974 NPM1P06748 294 aaKnown RBP eCLIP35.32■■■■□ 3.24
ITGB8-204ENST00000478974 PLXNC1O60486 1568 aa35.31■■■■□ 3.24
ITGB8-204ENST00000478974 AFAP1Q8N556 730 aa35.26■■■■□ 3.23
ITGB8-204ENST00000478974 FANCAO15360 1455 aa35.26■■■■□ 3.23
ITGB8-204ENST00000478974 TEX14Q8IWB6 1497 aa35.24■■■■□ 3.23
ITGB8-204ENST00000478974 DUOX2Q9NRD8 1548 aa35.2■■■■□ 3.22
ITGB8-204ENST00000478974 FAM135AQ9P2D6 1515 aa35.18■■■■□ 3.22
ITGB8-204ENST00000478974 UNC13BO14795 1591 aa35.17■■■■□ 3.22
ITGB8-204ENST00000478974 SPAG9O60271 1321 aaKnown RBP35.17■■■■□ 3.22
ITGB8-204ENST00000478974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.14■■■■□ 3.22
ITGB8-204ENST00000478974 NBPF8Q3BBV2 869 aa35.13■■■■□ 3.22
ITGB8-204ENST00000478974 SCAPERQ9BY12 1400 aa35.11■■■■□ 3.21
ITGB8-204ENST00000478974 ADGRL1O94910 1474 aa35.11■■■■□ 3.21
ITGB8-204ENST00000478974 ZFYVE16Q7Z3T8 1539 aa35.11■■■■□ 3.21
ITGB8-204ENST00000478974 RTEL1-TNFRSF6BF6WH68 1400 aa35.1■■■■□ 3.21
ITGB8-204ENST00000478974 ERBINQ96RT1 1412 aa35.1■■■■□ 3.21
ITGB8-204ENST00000478974 DDX10Q13206 875 aaKnown RBP35.07■■■■□ 3.2
ITGB8-204ENST00000478974 CYB5RLQ6IPT4 315 aa35.07■■■■□ 3.2
ITGB8-204ENST00000478974 CD109Q6YHK3 1445 aa35.04■■■■□ 3.2
ITGB8-204ENST00000478974 IQGAP3Q86VI3 1631 aa35.04■■■■□ 3.2
ITGB8-204ENST00000478974 MAGI2Q86UL8 1455 aa35.02■■■■□ 3.2
ITGB8-204ENST00000478974 INO80Q9ULG1 1556 aaPredicted RBP35.02■■■■□ 3.2
ITGB8-204ENST00000478974 RIMBP3CA6NJZ7 1639 aa35.02■■■■□ 3.2
ITGB8-204ENST00000478974 RIMBP3BA6NNM3 1639 aa35.02■■■■□ 3.2
ITGB8-204ENST00000478974 RIMBP3Q9UFD9 1639 aa35.02■■■■□ 3.2
ITGB8-204ENST00000478974 ATP7AQ04656 1500 aa35.01■■■■□ 3.2
ITGB8-204ENST00000478974 HSPA5P11021 654 aaKnown RBP35.01■■■■□ 3.19
ITGB8-204ENST00000478974 PLA2R1Q13018 1463 aa34.94■■■■□ 3.18
ITGB8-204ENST00000478974 MYT1LQ9UL68 1186 aa34.93■■■■□ 3.18
ITGB8-204ENST00000478974 EIF4G2P78344 907 aaKnown RBP eCLIP34.93■■■■□ 3.18
ITGB8-204ENST00000478974 YTHDC1Q96MU7 727 aaKnown RBP34.92■■■■□ 3.18
ITGB8-204ENST00000478974 KIDINS220Q9ULH0 1771 aa34.88■■■■□ 3.17
ITGB8-204ENST00000478974 ZNF326Q5BKZ1 582 aaKnown RBP34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms