RNA–Protein interactions for RNA: ENST00000478886.1

CMTM6-202, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

TSL 2

Gene CMTM6, Length 803 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-202ENST00000478886 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
CMTM6-202ENST00000478886 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
CMTM6-202ENST00000478886 MFRPQ9BY79 579 aa13.64□□□□□ -0.23
CMTM6-202ENST00000478886 DNAJC5Q9H3Z4 198 aa13.63□□□□□ -0.23
CMTM6-202ENST00000478886 FBXO22Q8NEZ5 403 aa13.62□□□□□ -0.23
CMTM6-202ENST00000478886 SCUBE2Q9NQ36 999 aa13.62□□□□□ -0.23
CMTM6-202ENST00000478886 DPY19L2Q6NUT2 758 aa13.61□□□□□ -0.23
CMTM6-202ENST00000478886 L3MBTL3Q96JM7 780 aaPredicted RBP13.61□□□□□ -0.23
CMTM6-202ENST00000478886 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
CMTM6-202ENST00000478886 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
CMTM6-202ENST00000478886 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
CMTM6-202ENST00000478886 G3V3G9 751 aa13.56□□□□□ -0.24
CMTM6-202ENST00000478886 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
CMTM6-202ENST00000478886 BOLA1Q9Y3E2 137 aa13.55□□□□□ -0.24
CMTM6-202ENST00000478886 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
CMTM6-202ENST00000478886 RYDENQ9NUL5 291 aaKnown RBP13.5□□□□□ -0.25
CMTM6-202ENST00000478886 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
CMTM6-202ENST00000478886 MICALL2Q8IY33 904 aa13.49□□□□□ -0.25
CMTM6-202ENST00000478886 TMEM121BQ9BXQ6 578 aaPredicted RBP13.48□□□□□ -0.25
CMTM6-202ENST00000478886 BBXQ8WY36 941 aaPredicted RBP13.46□□□□□ -0.25
CMTM6-202ENST00000478886 SLAIN1Q8ND83 568 aa13.44□□□□□ -0.26
CMTM6-202ENST00000478886 PPP1R37O75864 691 aa13.42□□□□□ -0.26
CMTM6-202ENST00000478886 GTPBP6O43824 516 aaPredicted RBP13.4□□□□□ -0.26
CMTM6-202ENST00000478886 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
CMTM6-202ENST00000478886 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
CMTM6-202ENST00000478886 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
CMTM6-202ENST00000478886 LAMC3Q9Y6N6 1575 aa13.29□□□□□ -0.28
CMTM6-202ENST00000478886 SPRYD3Q8NCJ5 442 aa13.28□□□□□ -0.28
CMTM6-202ENST00000478886 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
CMTM6-202ENST00000478886 CFTRP13569 1480 aa13.25□□□□□ -0.29
CMTM6-202ENST00000478886 NESP48681 1621 aa13.24□□□□□ -0.29
CMTM6-202ENST00000478886 SNPHO15079 494 aa13.24□□□□□ -0.29
CMTM6-202ENST00000478886 PAXIP1Q6ZW49 1069 aaPredicted RBP13.24□□□□□ -0.29
CMTM6-202ENST00000478886 PRDM2Q13029 1718 aa13.24□□□□□ -0.29
CMTM6-202ENST00000478886 TMC2Q8TDI7 906 aa13.23□□□□□ -0.29
CMTM6-202ENST00000478886 CFAP44Q96MT7 982 aa13.22□□□□□ -0.29
CMTM6-202ENST00000478886 C2orf72A6NCS6 295 aa13.2□□□□□ -0.3
CMTM6-202ENST00000478886 KIF3CO14782 793 aa13.2□□□□□ -0.3
CMTM6-202ENST00000478886 PDS5BQ9NTI5 1447 aa13.19□□□□□ -0.3
CMTM6-202ENST00000478886 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
CMTM6-202ENST00000478886 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
CMTM6-202ENST00000478886 FANCD2Q9BXW9 1451 aa13.15□□□□□ -0.3
CMTM6-202ENST00000478886 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
CMTM6-202ENST00000478886 KIF21AQ7Z4S6 1674 aa13.13□□□□□ -0.31
CMTM6-202ENST00000478886 HOXB3P14651 431 aaPredicted RBP13.13□□□□□ -0.31
CMTM6-202ENST00000478886 DOK7Q18PE1 504 aa13.13□□□□□ -0.31
CMTM6-202ENST00000478886 CRISPLD2Q9H0B8 497 aa13.13□□□□□ -0.31
CMTM6-202ENST00000478886 CEP164Q9UPV0 1460 aa13.12□□□□□ -0.31
CMTM6-202ENST00000478886 LCE2DQ5TA82 110 aaPredicted RBP13.11□□□□□ -0.31
CMTM6-202ENST00000478886 CADPS2Q86UW7 1296 aa13.11□□□□□ -0.31
CMTM6-202ENST00000478886 NCKAP5LQ9HCH0 1330 aa13.11□□□□□ -0.31
CMTM6-202ENST00000478886 ST18O60284 1047 aa13.1□□□□□ -0.31
CMTM6-202ENST00000478886 POTEMA6NI47 508 aa13.08□□□□□ -0.32
CMTM6-202ENST00000478886 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
CMTM6-202ENST00000478886 PDE4AP27815 886 aa13.08□□□□□ -0.32
CMTM6-202ENST00000478886 FOXK1P85037 733 aa13.08□□□□□ -0.32
CMTM6-202ENST00000478886 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
CMTM6-202ENST00000478886 DSG2Q14126 1118 aa13.07□□□□□ -0.32
CMTM6-202ENST00000478886 PLPP6Q8IY26 295 aa13.05□□□□□ -0.32
CMTM6-202ENST00000478886 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
CMTM6-202ENST00000478886 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
CMTM6-202ENST00000478886 PLCB2Q00722 1185 aa13.03□□□□□ -0.32
CMTM6-202ENST00000478886 PPP1R15BQ5SWA1 713 aa13.03□□□□□ -0.32
CMTM6-202ENST00000478886 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.33
CMTM6-202ENST00000478886 ZSWIM6Q9HCJ5 1215 aa13.02□□□□□ -0.33
CMTM6-202ENST00000478886 MFSD10Q14728 455 aa13.01□□□□□ -0.33
CMTM6-202ENST00000478886 ABCC8Q09428 1581 aa13.01□□□□□ -0.33
CMTM6-202ENST00000478886 THOC2Q8NI27 1593 aaKnown RBP13.01□□□□□ -0.33
CMTM6-202ENST00000478886 SLC34A2O95436 690 aa13□□□□□ -0.33
CMTM6-202ENST00000478886 DNMBPQ6XZF7 1577 aa12.99□□□□□ -0.33
CMTM6-202ENST00000478886 WRNQ14191 1432 aaPredicted RBP eCLIP12.99□□□□□ -0.33
CMTM6-202ENST00000478886 POTEGQ6S5H5 508 aa12.99□□□□□ -0.33
CMTM6-202ENST00000478886 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
CMTM6-202ENST00000478886 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
CMTM6-202ENST00000478886 WDR62O43379 1518 aa12.98□□□□□ -0.33
CMTM6-202ENST00000478886 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
CMTM6-202ENST00000478886 MARVELD3Q96A59 401 aa12.96□□□□□ -0.33
CMTM6-202ENST00000478886 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
CMTM6-202ENST00000478886 TOPBP1Q92547 1522 aa12.96□□□□□ -0.33
CMTM6-202ENST00000478886 CUX1P39880 1505 aa12.95□□□□□ -0.34
CMTM6-202ENST00000478886 EMP3P54852 163 aa12.95□□□□□ -0.34
CMTM6-202ENST00000478886 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
CMTM6-202ENST00000478886 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
CMTM6-202ENST00000478886 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
CMTM6-202ENST00000478886 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
CMTM6-202ENST00000478886 ARSIQ5FYB1 569 aa12.93□□□□□ -0.34
CMTM6-202ENST00000478886 PCDHGA4Q9Y5G9 962 aa12.93□□□□□ -0.34
CMTM6-202ENST00000478886 PTCD2Q8WV60 388 aaKnown RBP12.92□□□□□ -0.34
CMTM6-202ENST00000478886 CUX2O14529 1486 aa12.89□□□□□ -0.35
CMTM6-202ENST00000478886 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
CMTM6-202ENST00000478886 OXER1Q8TDS5 423 aa12.88□□□□□ -0.35
CMTM6-202ENST00000478886 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.35
CMTM6-202ENST00000478886 KHSRPQ92945 711 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■□□□ 12
CMTM6-202ENST00000478886 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
CMTM6-202ENST00000478886 TBC1D12O60347 775 aa12.86□□□□□ -0.35
CMTM6-202ENST00000478886 NUDT7P0C024 238 aa12.85□□□□□ -0.35
CMTM6-202ENST00000478886 WDR70Q9NW82 654 aa12.85□□□□□ -0.35
CMTM6-202ENST00000478886 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
CMTM6-202ENST00000478886 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
CMTM6-202ENST00000478886 IFT140Q96RY7 1462 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms