RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 POGZQ7Z3K3 1410 aa15.74■□□□□ 0.11
SCAMP3-206ENST00000478737 ARHGAP5Q13017 1502 aa15.73■□□□□ 0.11
SCAMP3-206ENST00000478737 MAGI2Q86UL8 1455 aa15.73■□□□□ 0.11
SCAMP3-206ENST00000478737 AEBP2Q6ZN18 517 aaPredicted RBP15.73■□□□□ 0.11
SCAMP3-206ENST00000478737 AFAP1Q8N556 730 aa15.73■□□□□ 0.11
SCAMP3-206ENST00000478737 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
SCAMP3-206ENST00000478737 CCNB3Q8WWL7 1395 aa15.73■□□□□ 0.11
SCAMP3-206ENST00000478737 MYO5CQ9NQX4 1742 aa15.72■□□□□ 0.11
SCAMP3-206ENST00000478737 EHBP1L1Q8N3D4 1523 aa15.71■□□□□ 0.11
SCAMP3-206ENST00000478737 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
SCAMP3-206ENST00000478737 ZMYM4Q5VZL5 1548 aa15.7■□□□□ 0.1
SCAMP3-206ENST00000478737 KANK4Q5T7N3 995 aaPredicted RBP15.7■□□□□ 0.1
SCAMP3-206ENST00000478737 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
SCAMP3-206ENST00000478737 KIAA1107Q9UPP5 1409 aa15.69■□□□□ 0.1
SCAMP3-206ENST00000478737 ARHGEF12Q9NZN5 1544 aa15.69■□□□□ 0.1
SCAMP3-206ENST00000478737 RICTORQ6R327 1708 aa15.69■□□□□ 0.1
SCAMP3-206ENST00000478737 ZNF518AQ6AHZ1 1483 aa15.69■□□□□ 0.1
SCAMP3-206ENST00000478737 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
SCAMP3-206ENST00000478737 CDC42BPBQ9Y5S2 1711 aa15.68■□□□□ 0.1
SCAMP3-206ENST00000478737 YEATS2Q9ULM3 1422 aa15.68■□□□□ 0.1
SCAMP3-206ENST00000478737 TRAPPC8Q9Y2L5 1435 aa15.68■□□□□ 0.1
SCAMP3-206ENST00000478737 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
SCAMP3-206ENST00000478737 NCOA2Q15596 1464 aa15.66■□□□□ 0.1
SCAMP3-206ENST00000478737 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
SCAMP3-206ENST00000478737 HNRNPMP52272 730 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCAMP3-206ENST00000478737 APLP2Q06481 763 aa15.65■□□□□ 0.1
SCAMP3-206ENST00000478737 KDM5CP41229 1560 aa15.65■□□□□ 0.1
SCAMP3-206ENST00000478737 CDC42BPAQ5VT25 1732 aa15.65■□□□□ 0.1
SCAMP3-206ENST00000478737 PLEKHH2Q8IVE3 1493 aa15.65■□□□□ 0.1
SCAMP3-206ENST00000478737 ABCC1P33527 1531 aa15.64■□□□□ 0.09
SCAMP3-206ENST00000478737 ZNF644Q9H582 1327 aaPredicted RBP15.64■□□□□ 0.09
SCAMP3-206ENST00000478737 ZFYVE16Q7Z3T8 1539 aa15.63■□□□□ 0.09
SCAMP3-206ENST00000478737 SUPT6HQ7KZ85 1726 aaKnown RBP15.63■□□□□ 0.09
SCAMP3-206ENST00000478737 ATP10AO60312 1499 aa15.63■□□□□ 0.09
SCAMP3-206ENST00000478737 ARHGEF40Q8TER5 1519 aa15.63■□□□□ 0.09
SCAMP3-206ENST00000478737 RSPH4AQ5TD94 716 aa15.62■□□□□ 0.09
SCAMP3-206ENST00000478737 SAMD9LQ8IVG5 1584 aa15.62■□□□□ 0.09
SCAMP3-206ENST00000478737 MBD5Q9P267 1494 aa15.61■□□□□ 0.09
SCAMP3-206ENST00000478737 ARID4BQ4LE39 1312 aaPredicted RBP15.61■□□□□ 0.09
SCAMP3-206ENST00000478737 ITSN2Q9NZM3 1697 aa15.6■□□□□ 0.09
SCAMP3-206ENST00000478737 SPAG9O60271 1321 aaKnown RBP15.59■□□□□ 0.09
SCAMP3-206ENST00000478737 C9orf84Q5VXU9 1444 aa15.58■□□□□ 0.08
SCAMP3-206ENST00000478737 MIA2Q96PC5 1412 aa15.57■□□□□ 0.08
SCAMP3-206ENST00000478737 SYCP2Q9BX26 1530 aa15.57■□□□□ 0.08
SCAMP3-206ENST00000478737 MYT1LQ9UL68 1186 aa15.56■□□□□ 0.08
SCAMP3-206ENST00000478737 MYOM3Q5VTT5 1437 aa15.55■□□□□ 0.08
SCAMP3-206ENST00000478737 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
SCAMP3-206ENST00000478737 RTEL1-TNFRSF6BF6WH68 1400 aa15.54■□□□□ 0.08
SCAMP3-206ENST00000478737 ADAMTSL3P82987 1691 aa15.54■□□□□ 0.08
SCAMP3-206ENST00000478737 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
SCAMP3-206ENST00000478737 DIP2CQ9Y2E4 1556 aa15.52■□□□□ 0.07
SCAMP3-206ENST00000478737 AGLP35573 1532 aa15.52■□□□□ 0.07
SCAMP3-206ENST00000478737 CAMSAP2Q08AD1 1489 aa15.52■□□□□ 0.07
SCAMP3-206ENST00000478737 KIDINS220Q9ULH0 1771 aa15.5■□□□□ 0.07
SCAMP3-206ENST00000478737 BCORL1Q5H9F3 1711 aa15.5■□□□□ 0.07
SCAMP3-206ENST00000478737 PTPRMP28827 1452 aa15.5■□□□□ 0.07
SCAMP3-206ENST00000478737 SIGLEC1Q9BZZ2 1709 aa15.49■□□□□ 0.07
SCAMP3-206ENST00000478737 TSPY4P0CV99 314 aa15.49■□□□□ 0.07
SCAMP3-206ENST00000478737 TSPY10P0CW01 314 aa15.49■□□□□ 0.07
SCAMP3-206ENST00000478737 MLECQ14165 292 aa15.49■□□□□ 0.07
SCAMP3-206ENST00000478737 CCDC141Q6ZP82 1450 aa15.48■□□□□ 0.07
SCAMP3-206ENST00000478737 ABCA6Q8N139 1617 aa15.48■□□□□ 0.07
SCAMP3-206ENST00000478737 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
SCAMP3-206ENST00000478737 ARHGEF5Q12774 1597 aa15.46■□□□□ 0.07
SCAMP3-206ENST00000478737 INO80Q9ULG1 1556 aaPredicted RBP15.46■□□□□ 0.07
SCAMP3-206ENST00000478737 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.07
SCAMP3-206ENST00000478737 FGD6Q6ZV73 1430 aa15.45■□□□□ 0.06
SCAMP3-206ENST00000478737 A2MP01023 1474 aa15.45■□□□□ 0.06
SCAMP3-206ENST00000478737 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
SCAMP3-206ENST00000478737 MADDQ8WXG6 1647 aa15.43■□□□□ 0.06
SCAMP3-206ENST00000478737 TCOF1Q13428 1488 aaKnown RBP15.43■□□□□ 0.06
SCAMP3-206ENST00000478737 PLXNC1O60486 1568 aa15.41■□□□□ 0.06
SCAMP3-206ENST00000478737 ABCC5O15440 1437 aa15.41■□□□□ 0.06
SCAMP3-206ENST00000478737 CNTLNQ9NXG0 1405 aa15.38■□□□□ 0.05
SCAMP3-206ENST00000478737 PTPN23Q9H3S7 1636 aa15.38■□□□□ 0.05
SCAMP3-206ENST00000478737 MAST1Q9Y2H9 1570 aa15.37■□□□□ 0.05
SCAMP3-206ENST00000478737 CEBPAP49715 358 aaPredicted RBP15.37■□□□□ 0.05
SCAMP3-206ENST00000478737 GGT6Q6P531 493 aa15.37■□□□□ 0.05
SCAMP3-206ENST00000478737 ESF1Q9H501 851 aaKnown RBP15.37■□□□□ 0.05
SCAMP3-206ENST00000478737 CROCC2H7BZ55 1655 aa15.36■□□□□ 0.05
SCAMP3-206ENST00000478737 KIF3BO15066 747 aa15.36■□□□□ 0.05
SCAMP3-206ENST00000478737 DAPK1P53355 1430 aa15.35■□□□□ 0.05
SCAMP3-206ENST00000478737 SHANK2Q9UPX8 1470 aa15.35■□□□□ 0.05
SCAMP3-206ENST00000478737 ZMYM3Q14202 1370 aa15.35■□□□□ 0.05
SCAMP3-206ENST00000478737 RIMS1Q86UR5 1692 aaKnown RBP15.35■□□□□ 0.05
SCAMP3-206ENST00000478737 ADGBQ8N7X0 1667 aa15.35■□□□□ 0.05
SCAMP3-206ENST00000478737 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
SCAMP3-206ENST00000478737 PPARGC1BQ86YN6 1023 aaKnown RBP15.32■□□□□ 0.04
SCAMP3-206ENST00000478737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCAMP3-206ENST00000478737 RRP7BPQ9NSQ0 103 aa15.31■□□□□ 0.04
SCAMP3-206ENST00000478737 KIF15Q9NS87 1388 aa15.31■□□□□ 0.04
SCAMP3-206ENST00000478737 NCOA1Q15788 1441 aa15.31■□□□□ 0.04
SCAMP3-206ENST00000478737 FER1L4A9Z1Z3 1794 aa15.31■□□□□ 0.04
SCAMP3-206ENST00000478737 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
SCAMP3-206ENST00000478737 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
SCAMP3-206ENST00000478737 LMTK3Q96Q04 1460 aa15.3■□□□□ 0.04
SCAMP3-206ENST00000478737 ANKRD30AQ9BXX3 1397 aa15.3■□□□□ 0.04
SCAMP3-206ENST00000478737 CHIC2Q9UKJ5 165 aa15.29■□□□□ 0.04
SCAMP3-206ENST00000478737 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
SCAMP3-206ENST00000478737 NPATQ14207 1427 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms