RNA–Protein interactions for RNA: ENST00000478499.3

RN7SL259P-201, Transcript of RNA, 7SL, cytoplasmic 259, pseudogene, humanhuman

BASIC

Gene RN7SL259P, Length 253 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL259P-201ENST00000478499 TOM1O60784 492 aa12.53□□□□□ -0.4
RN7SL259P-201ENST00000478499 MLECQ14165 292 aa12.53□□□□□ -0.4
RN7SL259P-201ENST00000478499 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
RN7SL259P-201ENST00000478499 SETD1BQ9UPS6 1966 aaKnown RBP12.52□□□□□ -0.41
RN7SL259P-201ENST00000478499 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
RN7SL259P-201ENST00000478499 UPF1Q92900 1129 aaKnown RBP eCLIP12.49□□□□□ -0.41
RN7SL259P-201ENST00000478499 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
RN7SL259P-201ENST00000478499 TRAPPC8Q9Y2L5 1435 aa12.47□□□□□ -0.41
RN7SL259P-201ENST00000478499 TCOF1Q13428 1488 aaKnown RBP12.46□□□□□ -0.42
RN7SL259P-201ENST00000478499 CPS1P31327 1500 aa12.45□□□□□ -0.42
RN7SL259P-201ENST00000478499 PLA2R1Q13018 1463 aa12.45□□□□□ -0.42
RN7SL259P-201ENST00000478499 PTPRKQ15262 1439 aa12.45□□□□□ -0.42
RN7SL259P-201ENST00000478499 C9orf84Q5VXU9 1444 aa12.43□□□□□ -0.42
RN7SL259P-201ENST00000478499 NCKAP5LQ9HCH0 1330 aa12.42□□□□□ -0.42
RN7SL259P-201ENST00000478499 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
RN7SL259P-201ENST00000478499 CARMIL1Q5VZK9 1371 aa12.42□□□□□ -0.42
RN7SL259P-201ENST00000478499 C3P01024 1663 aa12.42□□□□□ -0.42
RN7SL259P-201ENST00000478499 ATP10AO60312 1499 aa12.41□□□□□ -0.42
RN7SL259P-201ENST00000478499 HECW1Q76N89 1606 aa12.41□□□□□ -0.42
RN7SL259P-201ENST00000478499 PKD2Q13563 968 aa12.41□□□□□ -0.42
RN7SL259P-201ENST00000478499 IFFO2Q5TF58 517 aa12.4□□□□□ -0.42
RN7SL259P-201ENST00000478499 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.43
RN7SL259P-201ENST00000478499 ATP10BO94823 1461 aa12.39□□□□□ -0.43
RN7SL259P-201ENST00000478499 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
RN7SL259P-201ENST00000478499 NPATQ14207 1427 aa12.36□□□□□ -0.43
RN7SL259P-201ENST00000478499 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
RN7SL259P-201ENST00000478499 PPP6R1Q9UPN7 881 aa12.35□□□□□ -0.43
RN7SL259P-201ENST00000478499 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
RN7SL259P-201ENST00000478499 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
RN7SL259P-201ENST00000478499 AGLP35573 1532 aa12.31□□□□□ -0.44
RN7SL259P-201ENST00000478499 REREQ9P2R6 1566 aa12.3□□□□□ -0.44
RN7SL259P-201ENST00000478499 CNTLNQ9NXG0 1405 aa12.28□□□□□ -0.44
RN7SL259P-201ENST00000478499 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
RN7SL259P-201ENST00000478499 VWDEQ8N2E2 1590 aa12.27□□□□□ -0.44
RN7SL259P-201ENST00000478499 RNF17Q9BXT8 1623 aaKnown RBP12.26□□□□□ -0.45
RN7SL259P-201ENST00000478499 LRRC7Q96NW7 1537 aa12.25□□□□□ -0.45
RN7SL259P-201ENST00000478499 CEP170BQ9Y4F5 1589 aaPredicted RBP12.25□□□□□ -0.45
RN7SL259P-201ENST00000478499 MYO3AQ8NEV4 1616 aa12.24□□□□□ -0.45
RN7SL259P-201ENST00000478499 NEURL4Q96JN8 1562 aa12.24□□□□□ -0.45
RN7SL259P-201ENST00000478499 SENP3Q9H4L4 574 aaPredicted RBP12.24□□□□□ -0.45
RN7SL259P-201ENST00000478499 SCAPERQ9BY12 1400 aa12.23□□□□□ -0.45
RN7SL259P-201ENST00000478499 ARID3CA6NKF2 412 aa12.22□□□□□ -0.45
RN7SL259P-201ENST00000478499 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
RN7SL259P-201ENST00000478499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.21□□□□□ -0.45
RN7SL259P-201ENST00000478499 DIP2CQ9Y2E4 1556 aa12.21□□□□□ -0.46
RN7SL259P-201ENST00000478499 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.46
RN7SL259P-201ENST00000478499 MROH2AA6NES4 1674 aa12.19□□□□□ -0.46
RN7SL259P-201ENST00000478499 KDM5CP41229 1560 aa12.19□□□□□ -0.46
RN7SL259P-201ENST00000478499 FAM135BQ49AJ0 1406 aa12.17□□□□□ -0.46
RN7SL259P-201ENST00000478499 SYNMO15061 1565 aa12.17□□□□□ -0.46
RN7SL259P-201ENST00000478499 ESF1Q9H501 851 aaKnown RBP12.15□□□□□ -0.46
RN7SL259P-201ENST00000478499 ZMYM3Q14202 1370 aa12.15□□□□□ -0.46
RN7SL259P-201ENST00000478499 ZNF518AQ6AHZ1 1483 aa12.14□□□□□ -0.47
RN7SL259P-201ENST00000478499 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
RN7SL259P-201ENST00000478499 RBM33Q96EV2 1170 aaKnown RBP12.13□□□□□ -0.47
RN7SL259P-201ENST00000478499 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
RN7SL259P-201ENST00000478499 DNMT1P26358 1616 aaKnown RBP12.12□□□□□ -0.47
RN7SL259P-201ENST00000478499 ABCA6Q8N139 1617 aa12.12□□□□□ -0.47
RN7SL259P-201ENST00000478499 POLR1AO95602 1720 aaPredicted RBP12.12□□□□□ -0.47
RN7SL259P-201ENST00000478499 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
RN7SL259P-201ENST00000478499 MED14O60244 1454 aa12.12□□□□□ -0.47
RN7SL259P-201ENST00000478499 PLCH2O75038 1416 aa12.11□□□□□ -0.47
RN7SL259P-201ENST00000478499 SUPT6HQ7KZ85 1726 aaKnown RBP12.11□□□□□ -0.47
RN7SL259P-201ENST00000478499 NUP153P49790 1475 aaKnown RBP12.1□□□□□ -0.47
RN7SL259P-201ENST00000478499 MLH3Q9UHC1 1453 aa12.09□□□□□ -0.47
RN7SL259P-201ENST00000478499 LRP5O75197 1615 aa12.09□□□□□ -0.47
RN7SL259P-201ENST00000478499 ZNF772Q68DY9 489 aaPredicted RBP12.09□□□□□ -0.47
RN7SL259P-201ENST00000478499 CDK13Q14004 1512 aaKnown RBP12.09□□□□□ -0.47
RN7SL259P-201ENST00000478499 STRCP1A6NGW2 1772 aa12.09□□□□□ -0.47
RN7SL259P-201ENST00000478499 RAPGEF6Q8TEU7 1601 aa12.08□□□□□ -0.48
RN7SL259P-201ENST00000478499 FOXD1Q16676 465 aa12.07□□□□□ -0.48
RN7SL259P-201ENST00000478499 LRP6O75581 1613 aa12.07□□□□□ -0.48
RN7SL259P-201ENST00000478499 CTTNBP2Q8WZ74 1663 aa12.06□□□□□ -0.48
RN7SL259P-201ENST00000478499 RXRBP28702 533 aa12.05□□□□□ -0.48
RN7SL259P-201ENST00000478499 JCADQ9P266 1359 aa12.05□□□□□ -0.48
RN7SL259P-201ENST00000478499 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
RN7SL259P-201ENST00000478499 NPHP4O75161 1426 aaPredicted RBP12.04□□□□□ -0.48
RN7SL259P-201ENST00000478499 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
RN7SL259P-201ENST00000478499 RGS12O14924 1447 aa12.03□□□□□ -0.48
RN7SL259P-201ENST00000478499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.03□□□□□ -0.48
RN7SL259P-201ENST00000478499 PLEKHD1A6NEE1 506 aa12.02□□□□□ -0.49
RN7SL259P-201ENST00000478499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
RN7SL259P-201ENST00000478499 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
RN7SL259P-201ENST00000478499 ROBO1Q9Y6N7 1651 aa12□□□□□ -0.49
RN7SL259P-201ENST00000478499 FAM9AQ8IZU1 332 aaPredicted RBP12□□□□□ -0.49
RN7SL259P-201ENST00000478499 EFCAB2Q5VUJ9 269 aa11.99□□□□□ -0.49
RN7SL259P-201ENST00000478499 ANKLE2Q86XL3 938 aa11.99□□□□□ -0.49
RN7SL259P-201ENST00000478499 CHIC1Q5VXU3 224 aa11.98□□□□□ -0.49
RN7SL259P-201ENST00000478499 IQGAP1P46940 1657 aa11.97□□□□□ -0.49
RN7SL259P-201ENST00000478499 ABCC1P33527 1531 aa11.97□□□□□ -0.49
RN7SL259P-201ENST00000478499 SPATA31A6Q5VVP1 1343 aa11.97□□□□□ -0.49
RN7SL259P-201ENST00000478499 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
RN7SL259P-201ENST00000478499 KDM5DQ9BY66 1539 aa11.96□□□□□ -0.49
RN7SL259P-201ENST00000478499 EP400Q96L91 3159 aa11.96□□□□□ -0.49
RN7SL259P-201ENST00000478499 FGD6Q6ZV73 1430 aa11.95□□□□□ -0.5
RN7SL259P-201ENST00000478499 XIRP1Q702N8 1843 aaKnown RBP11.95□□□□□ -0.5
RN7SL259P-201ENST00000478499 ATAD2Q6PL18 1390 aa11.95□□□□□ -0.5
RN7SL259P-201ENST00000478499 SAMD9Q5K651 1589 aa11.95□□□□□ -0.5
RN7SL259P-201ENST00000478499 LRRC9Q6ZRR7 1453 aa11.95□□□□□ -0.5
RN7SL259P-201ENST00000478499 COL16A1Q07092 1604 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms