RNA–Protein interactions for RNA: ENST00000478022.2

CHAMP1-203, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-203ENST00000478022 NLRP6P59044 892 aa9.28□□□□□ -0.92
CHAMP1-203ENST00000478022 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
CHAMP1-203ENST00000478022 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
CHAMP1-203ENST00000478022 C3orf67Q6ZVT6 689 aa9.27□□□□□ -0.93
CHAMP1-203ENST00000478022 HS6ST3Q8IZP7 471 aa9.26□□□□□ -0.93
CHAMP1-203ENST00000478022 BOLA1Q9Y3E2 137 aa9.25□□□□□ -0.93
CHAMP1-203ENST00000478022 CCDC88BA6NC98 1476 aa9.23□□□□□ -0.93
CHAMP1-203ENST00000478022 SUPT5HO00267 1087 aaKnown RBP9.23□□□□□ -0.93
CHAMP1-203ENST00000478022 CHGAP10645 457 aaKnown RBP9.23□□□□□ -0.93
CHAMP1-203ENST00000478022 SLAIN1Q8ND83 568 aa9.23□□□□□ -0.93
CHAMP1-203ENST00000478022 PHF8Q9UPP1 1060 aa9.23□□□□□ -0.93
CHAMP1-203ENST00000478022 DPY19L2Q6NUT2 758 aa9.22□□□□□ -0.93
CHAMP1-203ENST00000478022 LAMC3Q9Y6N6 1575 aa9.21□□□□□ -0.93
CHAMP1-203ENST00000478022 CADPSQ9ULU8 1353 aa9.21□□□□□ -0.94
CHAMP1-203ENST00000478022 KIF21AQ7Z4S6 1674 aa9.2□□□□□ -0.94
CHAMP1-203ENST00000478022 FBXO22Q8NEZ5 403 aa9.19□□□□□ -0.94
CHAMP1-203ENST00000478022 MFRPQ9BY79 579 aa9.19□□□□□ -0.94
CHAMP1-203ENST00000478022 RYDENQ9NUL5 291 aaKnown RBP9.19□□□□□ -0.94
CHAMP1-203ENST00000478022 ERCC6Q03468 1493 aa9.18□□□□□ -0.94
CHAMP1-203ENST00000478022 MS4A4AQ96JQ5 239 aa9.18□□□□□ -0.94
CHAMP1-203ENST00000478022 TMEM121BQ9BXQ6 578 aaPredicted RBP9.18□□□□□ -0.94
CHAMP1-203ENST00000478022 SNPHO15079 494 aa9.17□□□□□ -0.94
CHAMP1-203ENST00000478022 DNAJC5Q9H3Z4 198 aa9.17□□□□□ -0.94
CHAMP1-203ENST00000478022 CFTRP13569 1480 aa9.16□□□□□ -0.94
CHAMP1-203ENST00000478022 MICALL2Q8IY33 904 aa9.15□□□□□ -0.94
CHAMP1-203ENST00000478022 THOC2Q8NI27 1593 aaKnown RBP9.14□□□□□ -0.95
CHAMP1-203ENST00000478022 PDS5BQ9NTI5 1447 aa9.14□□□□□ -0.95
CHAMP1-203ENST00000478022 PRDM2Q13029 1718 aa9.12□□□□□ -0.95
CHAMP1-203ENST00000478022 RTN4Q9NQC3 1192 aaKnown RBP9.12□□□□□ -0.95
CHAMP1-203ENST00000478022 FANCD2Q9BXW9 1451 aa9.12□□□□□ -0.95
CHAMP1-203ENST00000478022 FAM163AQ96GL9 167 aaPredicted RBP9.1□□□□□ -0.95
CHAMP1-203ENST00000478022 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
CHAMP1-203ENST00000478022 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
CHAMP1-203ENST00000478022 CUX2O14529 1486 aa9.06□□□□□ -0.96
CHAMP1-203ENST00000478022 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
CHAMP1-203ENST00000478022 NKX1-1Q15270 411 aaPredicted RBP9.05□□□□□ -0.96
CHAMP1-203ENST00000478022 WDR62O43379 1518 aa9.05□□□□□ -0.96
CHAMP1-203ENST00000478022 DOK7Q18PE1 504 aa9.02□□□□□ -0.97
CHAMP1-203ENST00000478022 RIMBP2O15034 1052 aa9.01□□□□□ -0.97
CHAMP1-203ENST00000478022 PPP1R37O75864 691 aa9.01□□□□□ -0.97
CHAMP1-203ENST00000478022 TMC2Q8TDI7 906 aa9.01□□□□□ -0.97
CHAMP1-203ENST00000478022 BBXQ8WY36 941 aaPredicted RBP9.01□□□□□ -0.97
CHAMP1-203ENST00000478022 ST18O60284 1047 aa9□□□□□ -0.97
CHAMP1-203ENST00000478022 POTEMA6NI47 508 aa8.99□□□□□ -0.97
CHAMP1-203ENST00000478022 POTEGQ6S5H5 508 aa8.99□□□□□ -0.97
CHAMP1-203ENST00000478022 TMEM92Q6UXU6 159 aa8.99□□□□□ -0.97
CHAMP1-203ENST00000478022 TOPBP1Q92547 1522 aa8.99□□□□□ -0.97
CHAMP1-203ENST00000478022 GTPBP6O43824 516 aaPredicted RBP8.98□□□□□ -0.97
CHAMP1-203ENST00000478022 ZNF710Q8N1W2 664 aa8.98□□□□□ -0.97
CHAMP1-203ENST00000478022 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
CHAMP1-203ENST00000478022 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.97□□□□□ -0.97
CHAMP1-203ENST00000478022 DNMBPQ6XZF7 1577 aa8.96□□□□□ -0.97
CHAMP1-203ENST00000478022 ZSWIM6Q9HCJ5 1215 aa8.96□□□□□ -0.98
CHAMP1-203ENST00000478022 PCDH10Q9P2E7 1040 aa8.96□□□□□ -0.98
CHAMP1-203ENST00000478022 CUX1P39880 1505 aa8.95□□□□□ -0.98
CHAMP1-203ENST00000478022 C2orf72A6NCS6 295 aa8.95□□□□□ -0.98
CHAMP1-203ENST00000478022 KIF3CO14782 793 aa8.95□□□□□ -0.98
CHAMP1-203ENST00000478022 HOXB3P14651 431 aaPredicted RBP8.95□□□□□ -0.98
CHAMP1-203ENST00000478022 ABCC8Q09428 1581 aa8.93□□□□□ -0.98
CHAMP1-203ENST00000478022 ZNF608Q9ULD9 1512 aaPredicted RBP8.91□□□□□ -0.98
CHAMP1-203ENST00000478022 POLA1P09884 1462 aaPredicted RBP8.91□□□□□ -0.98
CHAMP1-203ENST00000478022 GPHNQ9NQX3 736 aaPredicted RBP8.91□□□□□ -0.98
CHAMP1-203ENST00000478022 FGD5Q6ZNL6 1462 aa8.9□□□□□ -0.98
CHAMP1-203ENST00000478022 RAD54L2Q9Y4B4 1467 aa8.9□□□□□ -0.98
CHAMP1-203ENST00000478022 HOXB1P14653 301 aaPredicted RBP8.9□□□□□ -0.98
CHAMP1-203ENST00000478022 SPRYD3Q8NCJ5 442 aa8.9□□□□□ -0.98
CHAMP1-203ENST00000478022 TARBP1Q13395 1621 aaKnown RBP8.9□□□□□ -0.99
CHAMP1-203ENST00000478022 SYNJ1O43426 1573 aa8.9□□□□□ -0.99
CHAMP1-203ENST00000478022 EMP3P54852 163 aa8.89□□□□□ -0.99
CHAMP1-203ENST00000478022 PDE4AP27815 886 aa8.88□□□□□ -0.99
CHAMP1-203ENST00000478022 FOXK1P85037 733 aa8.88□□□□□ -0.99
CHAMP1-203ENST00000478022 IFT140Q96RY7 1462 aa8.88□□□□□ -0.99
CHAMP1-203ENST00000478022 SLC34A2O95436 690 aa8.87□□□□□ -0.99
CHAMP1-203ENST00000478022 MARVELD3Q96A59 401 aa8.87□□□□□ -0.99
CHAMP1-203ENST00000478022 BIVM-ERCC5R4GMW8 1640 aa8.86□□□□□ -0.99
CHAMP1-203ENST00000478022 SOGA1O94964 1423 aa8.86□□□□□ -0.99
CHAMP1-203ENST00000478022 WRNQ14191 1432 aaPredicted RBP eCLIP8.86□□□□□ -0.99
CHAMP1-203ENST00000478022 AQRO60306 1485 aaKnown RBP eCLIP8.85□□□□□ -0.99
CHAMP1-203ENST00000478022 TOP2BQ02880 1626 aa8.85□□□□□ -0.99
CHAMP1-203ENST00000478022 CRISPLD2Q9H0B8 497 aa8.85□□□□□ -0.99
CHAMP1-203ENST00000478022 EIF4G3O43432 1585 aaKnown RBP8.85□□□□□ -0.99
CHAMP1-203ENST00000478022 PLPP6Q8IY26 295 aa8.84□□□□□ -0.99
CHAMP1-203ENST00000478022 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -0.99
CHAMP1-203ENST00000478022 WDR97A6NE52 1622 aa8.83□□□□□ -1
CHAMP1-203ENST00000478022 GPR153Q6NV75 609 aa8.83□□□□□ -1
CHAMP1-203ENST00000478022 DSG2Q14126 1118 aa8.82□□□□□ -1
CHAMP1-203ENST00000478022 CDAN1Q8IWY9 1227 aa8.82□□□□□ -1
CHAMP1-203ENST00000478022 ERBB3P21860 1342 aa8.81□□□□□ -1
CHAMP1-203ENST00000478022 FAM205CA6NFA0 338 aa8.81□□□□□ -1
CHAMP1-203ENST00000478022 TBC1D12O60347 775 aa8.81□□□□□ -1
CHAMP1-203ENST00000478022 ARSIQ5FYB1 569 aa8.81□□□□□ -1
CHAMP1-203ENST00000478022 PAXIP1Q6ZW49 1069 aaPredicted RBP8.81□□□□□ -1
CHAMP1-203ENST00000478022 PPP1R15BQ5SWA1 713 aa8.8□□□□□ -1
CHAMP1-203ENST00000478022 PCDHGA4Q9Y5G9 962 aa8.8□□□□□ -1
CHAMP1-203ENST00000478022 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
CHAMP1-203ENST00000478022 PTCD2Q8WV60 388 aaKnown RBP8.79□□□□□ -1
CHAMP1-203ENST00000478022 DDX27Q96GQ7 796 aaKnown RBP8.79□□□□□ -1
CHAMP1-203ENST00000478022 CFAP44Q96MT7 982 aa8.79□□□□□ -1
CHAMP1-203ENST00000478022 HS3ST6Q96QI5 342 aa8.79□□□□□ -1
CHAMP1-203ENST00000478022 LARP6Q9BRS8 491 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms