RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ZMYND15Q9H091 742 aa17.47■□□□□ 0.39
RTFDC1-207ENST00000477573 NOP58Q9Y2X3 529 aaKnown RBP17.47■□□□□ 0.39
RTFDC1-207ENST00000477573 CDK13Q14004 1512 aaKnown RBP17.46■□□□□ 0.39
RTFDC1-207ENST00000477573 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
RTFDC1-207ENST00000477573 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
RTFDC1-207ENST00000477573 NUP153P49790 1475 aaKnown RBP17.45■□□□□ 0.38
RTFDC1-207ENST00000477573 CHD1O14646 1710 aa17.44■□□□□ 0.38
RTFDC1-207ENST00000477573 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
RTFDC1-207ENST00000477573 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
RTFDC1-207ENST00000477573 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
RTFDC1-207ENST00000477573 NBR1Q14596 966 aa17.39■□□□□ 0.37
RTFDC1-207ENST00000477573 ARID3CA6NKF2 412 aa17.39■□□□□ 0.37
RTFDC1-207ENST00000477573 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.37
RTFDC1-207ENST00000477573 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
RTFDC1-207ENST00000477573 PLB1Q6P1J6 1458 aa17.38■□□□□ 0.37
RTFDC1-207ENST00000477573 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
RTFDC1-207ENST00000477573 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
RTFDC1-207ENST00000477573 WASHC2AQ641Q2 1341 aa17.35■□□□□ 0.37
RTFDC1-207ENST00000477573 ABCA8O94911 1581 aa17.34■□□□□ 0.37
RTFDC1-207ENST00000477573 PDE4CQ08493 712 aa17.34■□□□□ 0.37
RTFDC1-207ENST00000477573 TROQ12816 1431 aaPredicted RBP17.33■□□□□ 0.37
RTFDC1-207ENST00000477573 WASHC2CQ9Y4E1 1318 aa17.33■□□□□ 0.37
RTFDC1-207ENST00000477573 FGD1P98174 961 aa17.33■□□□□ 0.37
RTFDC1-207ENST00000477573 VSIG10Q8N0Z9 540 aa17.33■□□□□ 0.36
RTFDC1-207ENST00000477573 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
RTFDC1-207ENST00000477573 PTPRGP23470 1445 aa17.32■□□□□ 0.36
RTFDC1-207ENST00000477573 HFM1A2PYH4 1435 aa17.3■□□□□ 0.36
RTFDC1-207ENST00000477573 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
RTFDC1-207ENST00000477573 ADCY10Q96PN6 1610 aa17.28■□□□□ 0.36
RTFDC1-207ENST00000477573 PDIA4P13667 645 aaKnown RBP17.28■□□□□ 0.36
RTFDC1-207ENST00000477573 PLEKHD1A6NEE1 506 aa17.27■□□□□ 0.36
RTFDC1-207ENST00000477573 PTPRKQ15262 1439 aa17.27■□□□□ 0.35
RTFDC1-207ENST00000477573 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
RTFDC1-207ENST00000477573 ATP10BO94823 1461 aa17.25■□□□□ 0.35
RTFDC1-207ENST00000477573 AAMPQ13685 434 aa17.25■□□□□ 0.35
RTFDC1-207ENST00000477573 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
RTFDC1-207ENST00000477573 CLASP1Q7Z460 1538 aa17.23■□□□□ 0.35
RTFDC1-207ENST00000477573 NAIPQ13075 1403 aa17.23■□□□□ 0.35
RTFDC1-207ENST00000477573 UACAQ9BZF9 1416 aa17.22■□□□□ 0.35
RTFDC1-207ENST00000477573 KIF14Q15058 1648 aa17.22■□□□□ 0.35
RTFDC1-207ENST00000477573 MAPKBP1O60336 1514 aa17.21■□□□□ 0.35
RTFDC1-207ENST00000477573 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.34
RTFDC1-207ENST00000477573 CFDP1Q9UEE9 299 aaPredicted RBP17.2■□□□□ 0.34
RTFDC1-207ENST00000477573 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
RTFDC1-207ENST00000477573 GPATCH8Q9UKJ3 1502 aaKnown RBP17.19■□□□□ 0.34
RTFDC1-207ENST00000477573 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
RTFDC1-207ENST00000477573 DNMT1P26358 1616 aaKnown RBP17.18■□□□□ 0.34
RTFDC1-207ENST00000477573 DAPK1P53355 1430 aa17.17■□□□□ 0.34
RTFDC1-207ENST00000477573 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
RTFDC1-207ENST00000477573 ROCK1Q13464 1354 aa17.17■□□□□ 0.34
RTFDC1-207ENST00000477573 CHIC2Q9UKJ5 165 aa17.16■□□□□ 0.34
RTFDC1-207ENST00000477573 ABCC2Q92887 1545 aa17.15■□□□□ 0.34
RTFDC1-207ENST00000477573 CAMSAP2Q08AD1 1489 aa17.15■□□□□ 0.34
RTFDC1-207ENST00000477573 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
RTFDC1-207ENST00000477573 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
RTFDC1-207ENST00000477573 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
RTFDC1-207ENST00000477573 ABCC5O15440 1437 aa17.14■□□□□ 0.33
RTFDC1-207ENST00000477573 IPO9Q96P70 1041 aaKnown RBP17.13■□□□□ 0.33
RTFDC1-207ENST00000477573 ABCC10Q5T3U5 1492 aa17.13■□□□□ 0.33
RTFDC1-207ENST00000477573 ZNF644Q9H582 1327 aaPredicted RBP17.12■□□□□ 0.33
RTFDC1-207ENST00000477573 CDC42BPAQ5VT25 1732 aa17.11■□□□□ 0.33
RTFDC1-207ENST00000477573 RRP9O43818 475 aaKnown RBP17.11■□□□□ 0.33
RTFDC1-207ENST00000477573 A0A0U1RQG5 324 aaPredicted RBP17.1■□□□□ 0.33
RTFDC1-207ENST00000477573 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
RTFDC1-207ENST00000477573 UHRF1BP1LA0JNW5 1464 aa17.09■□□□□ 0.33
RTFDC1-207ENST00000477573 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
RTFDC1-207ENST00000477573 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.33
RTFDC1-207ENST00000477573 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
RTFDC1-207ENST00000477573 BRPF3Q9ULD4 1205 aa17.06■□□□□ 0.32
RTFDC1-207ENST00000477573 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
RTFDC1-207ENST00000477573 SIN3AQ96ST3 1273 aa17.05■□□□□ 0.32
RTFDC1-207ENST00000477573 CROCC2H7BZ55 1655 aa17.05■□□□□ 0.32
RTFDC1-207ENST00000477573 NEFMP07197 916 aa17.04■□□□□ 0.32
RTFDC1-207ENST00000477573 PPP4R2Q9NY27 417 aa17.04■□□□□ 0.32
RTFDC1-207ENST00000477573 ADGRL2O95490 1459 aa17.04■□□□□ 0.32
RTFDC1-207ENST00000477573 TAF7LQ5H9L4 462 aa17.04■□□□□ 0.32
RTFDC1-207ENST00000477573 KCNH8Q96L42 1107 aa17.03■□□□□ 0.32
RTFDC1-207ENST00000477573 PREX2Q70Z35 1606 aa17.03■□□□□ 0.32
RTFDC1-207ENST00000477573 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.32
RTFDC1-207ENST00000477573 KDM5BQ9UGL1 1544 aa17.02■□□□□ 0.32
RTFDC1-207ENST00000477573 SHANK2Q9UPX8 1470 aa17.02■□□□□ 0.32
RTFDC1-207ENST00000477573 NCOA1Q15788 1441 aa17.02■□□□□ 0.32
RTFDC1-207ENST00000477573 HSP90AA2PQ14568 343 aaPredicted RBP17.02■□□□□ 0.31
RTFDC1-207ENST00000477573 KDM6BO15054 1643 aa17.01■□□□□ 0.31
RTFDC1-207ENST00000477573 ZCCHC11Q5TAX3 1644 aaKnown RBP17.01■□□□□ 0.31
RTFDC1-207ENST00000477573 TSPY4P0CV99 314 aa17■□□□□ 0.31
RTFDC1-207ENST00000477573 TSPY10P0CW01 314 aa17■□□□□ 0.31
RTFDC1-207ENST00000477573 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
RTFDC1-207ENST00000477573 RSPH4AQ5TD94 716 aa17■□□□□ 0.31
RTFDC1-207ENST00000477573 OSCARQ8IYS5 282 aa17■□□□□ 0.31
RTFDC1-207ENST00000477573 BCL11BQ9C0K0 894 aaPredicted RBP17■□□□□ 0.31
RTFDC1-207ENST00000477573 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
RTFDC1-207ENST00000477573 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
RTFDC1-207ENST00000477573 CDC42BPBQ9Y5S2 1711 aa16.98■□□□□ 0.31
RTFDC1-207ENST00000477573 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
RTFDC1-207ENST00000477573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.98■□□□□ 0.31
RTFDC1-207ENST00000477573 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
RTFDC1-207ENST00000477573 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
RTFDC1-207ENST00000477573 C9orf84Q5VXU9 1444 aa16.97■□□□□ 0.31
RTFDC1-207ENST00000477573 MYO5CQ9NQX4 1742 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms