RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 PREX2Q70Z35 1606 aa14.31□□□□□ -0.12
PGK1-204ENST00000477335 CDC42BPBQ9Y5S2 1711 aa14.3□□□□□ -0.12
PGK1-204ENST00000477335 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
PGK1-204ENST00000477335 ZNF644Q9H582 1327 aaPredicted RBP14.29□□□□□ -0.12
PGK1-204ENST00000477335 PLCH2O75038 1416 aa14.29□□□□□ -0.12
PGK1-204ENST00000477335 MAP3K4Q9Y6R4 1608 aa14.29□□□□□ -0.12
PGK1-204ENST00000477335 ITSN2Q9NZM3 1697 aa14.29□□□□□ -0.12
PGK1-204ENST00000477335 KIF13AQ9H1H9 1805 aa14.29□□□□□ -0.12
PGK1-204ENST00000477335 TCOF1Q13428 1488 aaKnown RBP14.28□□□□□ -0.12
PGK1-204ENST00000477335 MIA2Q96PC5 1412 aa14.28□□□□□ -0.12
PGK1-204ENST00000477335 MYO5CQ9NQX4 1742 aa14.28□□□□□ -0.12
PGK1-204ENST00000477335 PTPN23Q9H3S7 1636 aa14.27□□□□□ -0.12
PGK1-204ENST00000477335 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.13
PGK1-204ENST00000477335 SAMD9LQ8IVG5 1584 aa14.26□□□□□ -0.13
PGK1-204ENST00000477335 CD109Q6YHK3 1445 aa14.26□□□□□ -0.13
PGK1-204ENST00000477335 ARHGAP5Q13017 1502 aa14.25□□□□□ -0.13
PGK1-204ENST00000477335 ARAP3Q8WWN8 1544 aa14.25□□□□□ -0.13
PGK1-204ENST00000477335 CAMSAP2Q08AD1 1489 aa14.25□□□□□ -0.13
PGK1-204ENST00000477335 CFDP1Q9UEE9 299 aaPredicted RBP14.25□□□□□ -0.13
PGK1-204ENST00000477335 PPRC1Q5VV67 1664 aaKnown RBP14.25□□□□□ -0.13
PGK1-204ENST00000477335 TRIM26Q12899 539 aaPredicted RBP14.23□□□□□ -0.13
PGK1-204ENST00000477335 ZNF777Q9ULD5 760 aaPredicted RBP14.23□□□□□ -0.13
PGK1-204ENST00000477335 ARHGEF12Q9NZN5 1544 aa14.23□□□□□ -0.13
PGK1-204ENST00000477335 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
PGK1-204ENST00000477335 FANCAO15360 1455 aa14.22□□□□□ -0.13
PGK1-204ENST00000477335 PTPRKQ15262 1439 aa14.21□□□□□ -0.13
PGK1-204ENST00000477335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.21□□□□□ -0.144e-13■■■■■ 30.7
PGK1-204ENST00000477335 ABCC1P33527 1531 aa14.2□□□□□ -0.14
PGK1-204ENST00000477335 MBD5Q9P267 1494 aa14.2□□□□□ -0.14
PGK1-204ENST00000477335 EFCAB2Q5VUJ9 269 aa14.19□□□□□ -0.14
PGK1-204ENST00000477335 SYCP2Q9BX26 1530 aa14.19□□□□□ -0.14
PGK1-204ENST00000477335 ABCC5O15440 1437 aa14.18□□□□□ -0.14
PGK1-204ENST00000477335 TSPOAP1O95153 1857 aa14.18□□□□□ -0.14
PGK1-204ENST00000477335 AKNAQ7Z591 1439 aa14.17□□□□□ -0.14
PGK1-204ENST00000477335 HNRNPMP52272 730 aaKnown RBP eCLIP14.17□□□□□ -0.144e-12■■■□□ 18.4
PGK1-204ENST00000477335 TRAPPC8Q9Y2L5 1435 aa14.16□□□□□ -0.14
PGK1-204ENST00000477335 DNMT1P26358 1616 aaKnown RBP14.16□□□□□ -0.14
PGK1-204ENST00000477335 PCGF6Q9BYE7 350 aa14.16□□□□□ -0.14
PGK1-204ENST00000477335 DAPK1P53355 1430 aa14.15□□□□□ -0.14
PGK1-204ENST00000477335 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
PGK1-204ENST00000477335 ARHGEF5Q12774 1597 aa14.15□□□□□ -0.14
PGK1-204ENST00000477335 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
PGK1-204ENST00000477335 NEO1Q92859 1461 aa14.15□□□□□ -0.14
PGK1-204ENST00000477335 ITGAEP38570 1179 aa14.15□□□□□ -0.14
PGK1-204ENST00000477335 CFAP74Q9C0B2 1584 aa14.14□□□□□ -0.15
PGK1-204ENST00000477335 PLEKHH2Q8IVE3 1493 aa14.14□□□□□ -0.15
PGK1-204ENST00000477335 SCAPERQ9BY12 1400 aa14.14□□□□□ -0.15
PGK1-204ENST00000477335 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
PGK1-204ENST00000477335 CROCC2H7BZ55 1655 aa14.13□□□□□ -0.15
PGK1-204ENST00000477335 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
PGK1-204ENST00000477335 CCDC141Q6ZP82 1450 aa14.12□□□□□ -0.15
PGK1-204ENST00000477335 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
PGK1-204ENST00000477335 FRMPD1Q5SYB0 1578 aa14.11□□□□□ -0.15
PGK1-204ENST00000477335 TEX14Q8IWB6 1497 aa14.11□□□□□ -0.15
PGK1-204ENST00000477335 POGZQ7Z3K3 1410 aa14.1□□□□□ -0.15
PGK1-204ENST00000477335 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
PGK1-204ENST00000477335 CHIC2Q9UKJ5 165 aa14.09□□□□□ -0.15
PGK1-204ENST00000477335 C9orf84Q5VXU9 1444 aa14.08□□□□□ -0.15
PGK1-204ENST00000477335 SHANK2Q9UPX8 1470 aa14.08□□□□□ -0.16
PGK1-204ENST00000477335 MAST1Q9Y2H9 1570 aa14.08□□□□□ -0.16
PGK1-204ENST00000477335 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
PGK1-204ENST00000477335 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
PGK1-204ENST00000477335 RAPGEF3O95398 923 aa14.07□□□□□ -0.16
PGK1-204ENST00000477335 KDM5CP41229 1560 aa14.07□□□□□ -0.16
PGK1-204ENST00000477335 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
PGK1-204ENST00000477335 ZFYVE16Q7Z3T8 1539 aa14.06□□□□□ -0.16
PGK1-204ENST00000477335 KCNA4P22459 653 aa14.06□□□□□ -0.16
PGK1-204ENST00000477335 INO80Q9ULG1 1556 aaPredicted RBP14.05□□□□□ -0.16
PGK1-204ENST00000477335 ZNF518AQ6AHZ1 1483 aa14.05□□□□□ -0.16
PGK1-204ENST00000477335 ROCK1Q13464 1354 aa14.04□□□□□ -0.16
PGK1-204ENST00000477335 ADGBQ8N7X0 1667 aa14.04□□□□□ -0.16
PGK1-204ENST00000477335 RSPH4AQ5TD94 716 aa14.03□□□□□ -0.16
PGK1-204ENST00000477335 RRP7BPQ9NSQ0 103 aa14.03□□□□□ -0.16
PGK1-204ENST00000477335 NAIPQ13075 1403 aa14.03□□□□□ -0.16
PGK1-204ENST00000477335 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
PGK1-204ENST00000477335 KDM6BO15054 1643 aa14.03□□□□□ -0.16
PGK1-204ENST00000477335 KIDINS220Q9ULH0 1771 aa14.02□□□□□ -0.16
PGK1-204ENST00000477335 ATP7AQ04656 1500 aa14.02□□□□□ -0.16
PGK1-204ENST00000477335 HFM1A2PYH4 1435 aa14.02□□□□□ -0.16
PGK1-204ENST00000477335 SPAG9O60271 1321 aaKnown RBP14.02□□□□□ -0.17
PGK1-204ENST00000477335 ZMYM4Q5VZL5 1548 aa14.01□□□□□ -0.17
PGK1-204ENST00000477335 PLXNC1O60486 1568 aa14□□□□□ -0.17
PGK1-204ENST00000477335 HECW2Q9P2P5 1572 aa14□□□□□ -0.17
PGK1-204ENST00000477335 MLH3Q9UHC1 1453 aa14□□□□□ -0.17
PGK1-204ENST00000477335 RTEL1-TNFRSF6BF6WH68 1400 aa14□□□□□ -0.17
PGK1-204ENST00000477335 YEATS2Q9ULM3 1422 aa14□□□□□ -0.17
PGK1-204ENST00000477335 TSPY4P0CV99 314 aa14□□□□□ -0.17
PGK1-204ENST00000477335 TSPY10P0CW01 314 aa14□□□□□ -0.17
PGK1-204ENST00000477335 GCC2Q8IWJ2 1684 aa14□□□□□ -0.17
PGK1-204ENST00000477335 ANKRD30AQ9BXX3 1397 aa13.99□□□□□ -0.17
PGK1-204ENST00000477335 ABCA6Q8N139 1617 aa13.99□□□□□ -0.17
PGK1-204ENST00000477335 SETD5Q9C0A6 1442 aa13.98□□□□□ -0.17
PGK1-204ENST00000477335 KIF15Q9NS87 1388 aa13.98□□□□□ -0.17
PGK1-204ENST00000477335 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
PGK1-204ENST00000477335 DIP2CQ9Y2E4 1556 aa13.97□□□□□ -0.17
PGK1-204ENST00000477335 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
PGK1-204ENST00000477335 DUOX2Q9NRD8 1548 aa13.94□□□□□ -0.18
PGK1-204ENST00000477335 ANKRD50Q9ULJ7 1429 aa13.93□□□□□ -0.18
PGK1-204ENST00000477335 ARHGEF40Q8TER5 1519 aa13.93□□□□□ -0.18
PGK1-204ENST00000477335 MAGI2Q86UL8 1455 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms