RNA–Protein interactions for RNA: ENST00000477325.1

RPSA-206, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-206ENST00000477325 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
RPSA-206ENST00000477325 EFCAB5A4FU69 1503 aa16.45■□□□□ 0.22
RPSA-206ENST00000477325 ARHGEF12Q9NZN5 1544 aa16.45■□□□□ 0.22
RPSA-206ENST00000477325 MAGI2Q86UL8 1455 aa16.42■□□□□ 0.22
RPSA-206ENST00000477325 LTBP4Q8N2S1 1624 aa16.42■□□□□ 0.22
RPSA-206ENST00000477325 SAMD9Q5K651 1589 aa16.42■□□□□ 0.22
RPSA-206ENST00000477325 CFAP74Q9C0B2 1584 aa16.42■□□□□ 0.22
RPSA-206ENST00000477325 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
RPSA-206ENST00000477325 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
RPSA-206ENST00000477325 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
RPSA-206ENST00000477325 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
RPSA-206ENST00000477325 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
RPSA-206ENST00000477325 MLECQ14165 292 aa16.39■□□□□ 0.21
RPSA-206ENST00000477325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.39■□□□□ 0.21not detected■■□□□ 12.4
RPSA-206ENST00000477325 PTPRTO14522 1441 aa16.37■□□□□ 0.21
RPSA-206ENST00000477325 IQSEC2Q5JU85 1478 aa16.37■□□□□ 0.21
RPSA-206ENST00000477325 CEBPAP49715 358 aaPredicted RBP16.37■□□□□ 0.21
RPSA-206ENST00000477325 SETD1BQ9UPS6 1966 aaKnown RBP16.36■□□□□ 0.21
RPSA-206ENST00000477325 UHRF1BP1Q6BDS2 1440 aa16.33■□□□□ 0.2
RPSA-206ENST00000477325 ATP10AO60312 1499 aa16.33■□□□□ 0.2
RPSA-206ENST00000477325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
RPSA-206ENST00000477325 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
RPSA-206ENST00000477325 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
RPSA-206ENST00000477325 C9orf84Q5VXU9 1444 aa16.31■□□□□ 0.2
RPSA-206ENST00000477325 SCAPERQ9BY12 1400 aa16.29■□□□□ 0.2
RPSA-206ENST00000477325 PLEKHD1A6NEE1 506 aa16.28■□□□□ 0.2
RPSA-206ENST00000477325 C3P01024 1663 aa16.27■□□□□ 0.19
RPSA-206ENST00000477325 PLCH2O75038 1416 aa16.25■□□□□ 0.19
RPSA-206ENST00000477325 NCOA1Q15788 1441 aa16.25■□□□□ 0.19
RPSA-206ENST00000477325 KDM5CP41229 1560 aa16.21■□□□□ 0.19
RPSA-206ENST00000477325 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
RPSA-206ENST00000477325 DIP2CQ9Y2E4 1556 aa16.2■□□□□ 0.18
RPSA-206ENST00000477325 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
RPSA-206ENST00000477325 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
RPSA-206ENST00000477325 CDK13Q14004 1512 aaKnown RBP16.17■□□□□ 0.18
RPSA-206ENST00000477325 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
RPSA-206ENST00000477325 MYO5CQ9NQX4 1742 aa16.16■□□□□ 0.18
RPSA-206ENST00000477325 CAMSAP1Q5T5Y3 1602 aa16.16■□□□□ 0.18
RPSA-206ENST00000477325 ABCA6Q8N139 1617 aa16.16■□□□□ 0.18
RPSA-206ENST00000477325 ZNF335Q9H4Z2 1342 aaPredicted RBP16.15■□□□□ 0.18
RPSA-206ENST00000477325 AGLP35573 1532 aa16.14■□□□□ 0.18
RPSA-206ENST00000477325 UBAP1LF5GYI3 381 aa16.14■□□□□ 0.17
RPSA-206ENST00000477325 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
RPSA-206ENST00000477325 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
RPSA-206ENST00000477325 MLH3Q9UHC1 1453 aa16.1■□□□□ 0.17
RPSA-206ENST00000477325 KIF14Q15058 1648 aa16.09■□□□□ 0.17
RPSA-206ENST00000477325 NCKAP5LQ9HCH0 1330 aa16.08■□□□□ 0.16
RPSA-206ENST00000477325 NPATQ14207 1427 aa16.08■□□□□ 0.16
RPSA-206ENST00000477325 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
RPSA-206ENST00000477325 CNTLNQ9NXG0 1405 aa16.07■□□□□ 0.16
RPSA-206ENST00000477325 TCOF1Q13428 1488 aaKnown RBP16.07■□□□□ 0.16
RPSA-206ENST00000477325 MROH2AA6NES4 1674 aa16.07■□□□□ 0.16
RPSA-206ENST00000477325 ZNF142P52746 1687 aaPredicted RBP16.06■□□□□ 0.16
RPSA-206ENST00000477325 PLA2R1Q13018 1463 aa16.06■□□□□ 0.16
RPSA-206ENST00000477325 HSPA1LP34931 641 aa16.06■□□□□ 0.16
RPSA-206ENST00000477325 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
RPSA-206ENST00000477325 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
RPSA-206ENST00000477325 KIDINS220Q9ULH0 1771 aa16.04■□□□□ 0.16
RPSA-206ENST00000477325 CDC42BPBQ9Y5S2 1711 aa16.03■□□□□ 0.16
RPSA-206ENST00000477325 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
RPSA-206ENST00000477325 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
RPSA-206ENST00000477325 ABCC1P33527 1531 aa16■□□□□ 0.15
RPSA-206ENST00000477325 PKD2Q13563 968 aa16■□□□□ 0.15
RPSA-206ENST00000477325 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
RPSA-206ENST00000477325 ZMYM3Q14202 1370 aa16■□□□□ 0.15
RPSA-206ENST00000477325 ITSN2Q9NZM3 1697 aa15.99■□□□□ 0.15
RPSA-206ENST00000477325 ALKQ9UM73 1620 aa15.99■□□□□ 0.15
RPSA-206ENST00000477325 CEP170BQ9Y4F5 1589 aaPredicted RBP15.99■□□□□ 0.15
RPSA-206ENST00000477325 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
RPSA-206ENST00000477325 SUPT6HQ7KZ85 1726 aaKnown RBP15.98■□□□□ 0.15
RPSA-206ENST00000477325 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
RPSA-206ENST00000477325 PREX2Q70Z35 1606 aa15.96■□□□□ 0.15
RPSA-206ENST00000477325 PTPRKQ15262 1439 aa15.95■□□□□ 0.14
RPSA-206ENST00000477325 LRRIQ1Q96JM4 1722 aa15.95■□□□□ 0.14
RPSA-206ENST00000477325 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
RPSA-206ENST00000477325 CLTCQ00610 1675 aaKnown RBP15.94■□□□□ 0.14
RPSA-206ENST00000477325 CPS1P31327 1500 aa15.93■□□□□ 0.14
RPSA-206ENST00000477325 NEURL4Q96JN8 1562 aa15.92■□□□□ 0.14
RPSA-206ENST00000477325 TOM1O60784 492 aa15.92■□□□□ 0.14
RPSA-206ENST00000477325 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
RPSA-206ENST00000477325 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
RPSA-206ENST00000477325 PLXNC1O60486 1568 aa15.91■□□□□ 0.14
RPSA-206ENST00000477325 DNMT1P26358 1616 aaKnown RBP15.9■□□□□ 0.14
RPSA-206ENST00000477325 FMN1Q68DA7 1419 aa15.9■□□□□ 0.14
RPSA-206ENST00000477325 SHANK2Q9UPX8 1470 aa15.9■□□□□ 0.14
RPSA-206ENST00000477325 POLR1AO95602 1720 aaPredicted RBP15.89■□□□□ 0.13
RPSA-206ENST00000477325 CLIP1P30622 1438 aa15.88■□□□□ 0.13
RPSA-206ENST00000477325 EEA1Q15075 1411 aa15.88■□□□□ 0.13
RPSA-206ENST00000477325 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
RPSA-206ENST00000477325 VWDEQ8N2E2 1590 aa15.87■□□□□ 0.13
RPSA-206ENST00000477325 A2ML1A8K2U0 1454 aa15.87■□□□□ 0.13
RPSA-206ENST00000477325 RGS17Q9UGC6 210 aaPredicted RBP15.87■□□□□ 0.13
RPSA-206ENST00000477325 ARHGAP35Q9NRY4 1499 aa15.86■□□□□ 0.13
RPSA-206ENST00000477325 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
RPSA-206ENST00000477325 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
RPSA-206ENST00000477325 INO80Q9ULG1 1556 aaPredicted RBP15.83■□□□□ 0.12
RPSA-206ENST00000477325 SRCAPQ6ZRS2 3230 aa15.83■□□□□ 0.12
RPSA-206ENST00000477325 ATP7AQ04656 1500 aa15.82■□□□□ 0.12
RPSA-206ENST00000477325 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
RPSA-206ENST00000477325 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms