RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 ABCC10Q5T3U5 1492 aa9.68□□□□□ -0.86
CCDC30-209ENST00000477155 ADCY10Q96PN6 1610 aa9.67□□□□□ -0.86
CCDC30-209ENST00000477155 MAPKBP1O60336 1514 aa9.66□□□□□ -0.86
CCDC30-209ENST00000477155 TSPY4P0CV99 314 aa9.66□□□□□ -0.86
CCDC30-209ENST00000477155 TSPY10P0CW01 314 aa9.66□□□□□ -0.86
CCDC30-209ENST00000477155 ITSN2Q9NZM3 1697 aa9.65□□□□□ -0.86
CCDC30-209ENST00000477155 CDC42BPAQ5VT25 1732 aa9.65□□□□□ -0.87
CCDC30-209ENST00000477155 NPM1P06748 294 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC30-209ENST00000477155 FOXD1Q16676 465 aa9.64□□□□□ -0.87
CCDC30-209ENST00000477155 KDM5BQ9UGL1 1544 aa9.64□□□□□ -0.87
CCDC30-209ENST00000477155 UHRF1BP1LA0JNW5 1464 aa9.64□□□□□ -0.87
CCDC30-209ENST00000477155 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
CCDC30-209ENST00000477155 DNMT1P26358 1616 aaKnown RBP9.64□□□□□ -0.87
CCDC30-209ENST00000477155 ZCCHC11Q5TAX3 1644 aaKnown RBP9.64□□□□□ -0.87
CCDC30-209ENST00000477155 KDM6BO15054 1643 aa9.63□□□□□ -0.87
CCDC30-209ENST00000477155 AKNAQ7Z591 1439 aa9.63□□□□□ -0.87
CCDC30-209ENST00000477155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC30-209ENST00000477155 MPHOSPH9Q99550 1183 aa9.62□□□□□ -0.87
CCDC30-209ENST00000477155 CYB5RLQ6IPT4 315 aa9.62□□□□□ -0.87
CCDC30-209ENST00000477155 NCOA1Q15788 1441 aa9.62□□□□□ -0.87
CCDC30-209ENST00000477155 ROCK1Q13464 1354 aa9.62□□□□□ -0.87
CCDC30-209ENST00000477155 TTC37Q6PGP7 1564 aa9.62□□□□□ -0.87
CCDC30-209ENST00000477155 ARHGAP5Q13017 1502 aa9.62□□□□□ -0.87
CCDC30-209ENST00000477155 ANKRD30AQ9BXX3 1397 aa9.61□□□□□ -0.87
CCDC30-209ENST00000477155 EFCAB2Q5VUJ9 269 aa9.61□□□□□ -0.87
CCDC30-209ENST00000477155 SLC4A1APQ9BWU0 796 aaKnown RBP9.61□□□□□ -0.87
CCDC30-209ENST00000477155 CDC42BPBQ9Y5S2 1711 aa9.6□□□□□ -0.87
CCDC30-209ENST00000477155 DIEXFQ68CQ4 756 aaKnown RBP9.59□□□□□ -0.87
CCDC30-209ENST00000477155 C9orf84Q5VXU9 1444 aa9.59□□□□□ -0.87
CCDC30-209ENST00000477155 MBD5Q9P267 1494 aa9.58□□□□□ -0.88
CCDC30-209ENST00000477155 GCC2Q8IWJ2 1684 aa9.58□□□□□ -0.88
CCDC30-209ENST00000477155 SAMD9LQ8IVG5 1584 aa9.58□□□□□ -0.88
CCDC30-209ENST00000477155 ASXL2Q76L83 1435 aa9.58□□□□□ -0.88
CCDC30-209ENST00000477155 PLCH2O75038 1416 aa9.58□□□□□ -0.88
CCDC30-209ENST00000477155 RSPH4AQ5TD94 716 aa9.58□□□□□ -0.88
CCDC30-209ENST00000477155 PREX2Q70Z35 1606 aa9.57□□□□□ -0.88
CCDC30-209ENST00000477155 WDR7Q9Y4E6 1490 aa9.57□□□□□ -0.88
CCDC30-209ENST00000477155 ANKRD50Q9ULJ7 1429 aa9.57□□□□□ -0.88
CCDC30-209ENST00000477155 AFAP1Q8N556 730 aa9.57□□□□□ -0.88
CCDC30-209ENST00000477155 TONSLQ96HA7 1378 aa9.56□□□□□ -0.88
CCDC30-209ENST00000477155 SYCP2Q9BX26 1530 aa9.56□□□□□ -0.88
CCDC30-209ENST00000477155 MYT1LQ9UL68 1186 aa9.56□□□□□ -0.88
CCDC30-209ENST00000477155 KIF15Q9NS87 1388 aa9.56□□□□□ -0.88
CCDC30-209ENST00000477155 CCDC141Q6ZP82 1450 aa9.55□□□□□ -0.88
CCDC30-209ENST00000477155 MYO5CQ9NQX4 1742 aa9.55□□□□□ -0.88
CCDC30-209ENST00000477155 DENND4BO75064 1496 aaPredicted RBP9.55□□□□□ -0.88
CCDC30-209ENST00000477155 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
CCDC30-209ENST00000477155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC30-209ENST00000477155 ADGRL2O95490 1459 aa9.55□□□□□ -0.88
CCDC30-209ENST00000477155 NUP155O75694 1391 aa9.54□□□□□ -0.88
CCDC30-209ENST00000477155 PKD2Q13563 968 aa9.54□□□□□ -0.88
CCDC30-209ENST00000477155 ARHGEF12Q9NZN5 1544 aa9.54□□□□□ -0.88
CCDC30-209ENST00000477155 TIMELESSQ9UNS1 1208 aa9.54□□□□□ -0.88
CCDC30-209ENST00000477155 CROCC2H7BZ55 1655 aa9.53□□□□□ -0.88
CCDC30-209ENST00000477155 HIRIP3Q9BW71 556 aaPredicted RBP9.53□□□□□ -0.88
CCDC30-209ENST00000477155 TRAPPC8Q9Y2L5 1435 aa9.53□□□□□ -0.88
CCDC30-209ENST00000477155 ADGBQ8N7X0 1667 aa9.53□□□□□ -0.88
CCDC30-209ENST00000477155 SHANK2Q9UPX8 1470 aa9.52□□□□□ -0.88
CCDC30-209ENST00000477155 ARHGEF5Q12774 1597 aa9.52□□□□□ -0.88
CCDC30-209ENST00000477155 KIAA1107Q9UPP5 1409 aa9.52□□□□□ -0.89
CCDC30-209ENST00000477155 SPAG9O60271 1321 aaKnown RBP9.51□□□□□ -0.89
CCDC30-209ENST00000477155 PLEKHH2Q8IVE3 1493 aa9.51□□□□□ -0.89
CCDC30-209ENST00000477155 ACIN1Q9UKV3 1341 aaKnown RBP9.51□□□□□ -0.89
CCDC30-209ENST00000477155 FANCAO15360 1455 aa9.51□□□□□ -0.89
CCDC30-209ENST00000477155 PZPP20742 1482 aa9.5□□□□□ -0.89
CCDC30-209ENST00000477155 ANKRD30BQ9BXX2 1392 aa9.5□□□□□ -0.89
CCDC30-209ENST00000477155 L3MBTL2Q969R5 705 aa9.5□□□□□ -0.89
CCDC30-209ENST00000477155 SCAPERQ9BY12 1400 aa9.49□□□□□ -0.89
CCDC30-209ENST00000477155 CD109Q6YHK3 1445 aa9.49□□□□□ -0.89
CCDC30-209ENST00000477155 ABCC1P33527 1531 aa9.47□□□□□ -0.89
CCDC30-209ENST00000477155 ADGRL1O94910 1474 aa9.47□□□□□ -0.89
CCDC30-209ENST00000477155 ABCA9Q8IUA7 1624 aa9.47□□□□□ -0.89
CCDC30-209ENST00000477155 RIMBP3CA6NJZ7 1639 aa9.47□□□□□ -0.89
CCDC30-209ENST00000477155 RIMBP3BA6NNM3 1639 aa9.47□□□□□ -0.89
CCDC30-209ENST00000477155 RIMBP3Q9UFD9 1639 aa9.47□□□□□ -0.89
CCDC30-209ENST00000477155 ZNF326Q5BKZ1 582 aaKnown RBP9.45□□□□□ -0.9
CCDC30-209ENST00000477155 MIER1Q8N108 512 aa9.45□□□□□ -0.9
CCDC30-209ENST00000477155 FAM69CQ0P6D2 419 aa9.45□□□□□ -0.9
CCDC30-209ENST00000477155 RAPGEF3O95398 923 aa9.44□□□□□ -0.9
CCDC30-209ENST00000477155 ARAP3Q8WWN8 1544 aa9.44□□□□□ -0.9
CCDC30-209ENST00000477155 KIF3BO15066 747 aa9.44□□□□□ -0.9
CCDC30-209ENST00000477155 MAST1Q9Y2H9 1570 aa9.44□□□□□ -0.9
CCDC30-209ENST00000477155 RPRD2Q5VT52 1461 aaKnown RBP9.43□□□□□ -0.9
CCDC30-209ENST00000477155 NBPF8Q3BBV2 869 aa9.43□□□□□ -0.9
CCDC30-209ENST00000477155 KDM2AQ9Y2K7 1162 aa9.43□□□□□ -0.9
CCDC30-209ENST00000477155 DUOX2Q9NRD8 1548 aa9.42□□□□□ -0.9
CCDC30-209ENST00000477155 DDX10Q13206 875 aaKnown RBP9.42□□□□□ -0.9
CCDC30-209ENST00000477155 RGL3Q3MIN7 710 aa9.42□□□□□ -0.9
CCDC30-209ENST00000477155 FAM135AQ9P2D6 1515 aa9.41□□□□□ -0.9
CCDC30-209ENST00000477155 RTEL1-TNFRSF6BF6WH68 1400 aa9.41□□□□□ -0.9
CCDC30-209ENST00000477155 PLXNC1O60486 1568 aa9.41□□□□□ -0.9
CCDC30-209ENST00000477155 ERBINQ96RT1 1412 aa9.4□□□□□ -0.9
CCDC30-209ENST00000477155 ZFYVE16Q7Z3T8 1539 aa9.4□□□□□ -0.91
CCDC30-209ENST00000477155 ATP7AQ04656 1500 aa9.39□□□□□ -0.91
CCDC30-209ENST00000477155 DCAF11Q8TEB1 546 aa9.39□□□□□ -0.91
CCDC30-209ENST00000477155 HSPA5P11021 654 aaKnown RBP9.38□□□□□ -0.91
CCDC30-209ENST00000477155 GGT6Q6P531 493 aa9.38□□□□□ -0.91
CCDC30-209ENST00000477155 KDM5DQ9BY66 1539 aa9.38□□□□□ -0.91
CCDC30-209ENST00000477155 ZNF518AQ6AHZ1 1483 aa9.38□□□□□ -0.91
CCDC30-209ENST00000477155 DHX29Q7Z478 1369 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms