RNA–Protein interactions for RNA: ENST00000477109.1

KDM5C-211, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 297 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-211ENST00000477109 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
KDM5C-211ENST00000477109 SIGLEC1Q9BZZ2 1709 aa18.35■□□□□ 0.53
KDM5C-211ENST00000477109 HECW1Q76N89 1606 aa18.34■□□□□ 0.53
KDM5C-211ENST00000477109 HSPA2P54652 639 aa18.34■□□□□ 0.53
KDM5C-211ENST00000477109 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.53
KDM5C-211ENST00000477109 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
KDM5C-211ENST00000477109 EFCAB2Q5VUJ9 269 aa18.3■□□□□ 0.52
KDM5C-211ENST00000477109 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
KDM5C-211ENST00000477109 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
KDM5C-211ENST00000477109 ATP10AO60312 1499 aa18.26■□□□□ 0.51
KDM5C-211ENST00000477109 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
KDM5C-211ENST00000477109 FER1L4A9Z1Z3 1794 aa18.26■□□□□ 0.51
KDM5C-211ENST00000477109 KIF14Q15058 1648 aa18.25■□□□□ 0.51
KDM5C-211ENST00000477109 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
KDM5C-211ENST00000477109 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
KDM5C-211ENST00000477109 AFAP1Q8N556 730 aa18.22■□□□□ 0.51
KDM5C-211ENST00000477109 ARHGEF12Q9NZN5 1544 aa18.22■□□□□ 0.51
KDM5C-211ENST00000477109 CEBPAP49715 358 aaPredicted RBP18.21■□□□□ 0.51
KDM5C-211ENST00000477109 MYT1LQ9UL68 1186 aa18.21■□□□□ 0.51
KDM5C-211ENST00000477109 ARHGAP5Q13017 1502 aa18.21■□□□□ 0.51
KDM5C-211ENST00000477109 CLIP1P30622 1438 aa18.2■□□□□ 0.5
KDM5C-211ENST00000477109 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
KDM5C-211ENST00000477109 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
KDM5C-211ENST00000477109 LRRIQ1Q96JM4 1722 aa18.18■□□□□ 0.5
KDM5C-211ENST00000477109 CERKQ8TCT0 537 aa18.17■□□□□ 0.5
KDM5C-211ENST00000477109 KDM5CP41229 1560 aa18.16■□□□□ 0.5
KDM5C-211ENST00000477109 PREX1Q8TCU6 1659 aa18.13■□□□□ 0.49
KDM5C-211ENST00000477109 CEP162Q5TB80 1403 aa18.13■□□□□ 0.49
KDM5C-211ENST00000477109 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
KDM5C-211ENST00000477109 CDC42BPBQ9Y5S2 1711 aa18.12■□□□□ 0.49
KDM5C-211ENST00000477109 MLH3Q9UHC1 1453 aa18.1■□□□□ 0.49
KDM5C-211ENST00000477109 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
KDM5C-211ENST00000477109 ABCA6Q8N139 1617 aa18.09■□□□□ 0.49
KDM5C-211ENST00000477109 CASKIN1Q8WXD9 1431 aa18.09■□□□□ 0.49
KDM5C-211ENST00000477109 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
KDM5C-211ENST00000477109 UHRF1BP1Q6BDS2 1440 aa18.08■□□□□ 0.49
KDM5C-211ENST00000477109 REREQ9P2R6 1566 aa18.08■□□□□ 0.48
KDM5C-211ENST00000477109 ABCC1P33527 1531 aa18.08■□□□□ 0.48
KDM5C-211ENST00000477109 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
KDM5C-211ENST00000477109 ESF1Q9H501 851 aaKnown RBP18.06■□□□□ 0.48
KDM5C-211ENST00000477109 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
KDM5C-211ENST00000477109 SETD1BQ9UPS6 1966 aaKnown RBP18.06■□□□□ 0.48
KDM5C-211ENST00000477109 STRCQ7RTU9 1775 aa18.05■□□□□ 0.48
KDM5C-211ENST00000477109 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
KDM5C-211ENST00000477109 AGLP35573 1532 aa18.04■□□□□ 0.48
KDM5C-211ENST00000477109 ZNF777Q9ULD5 760 aaPredicted RBP18.04■□□□□ 0.48
KDM5C-211ENST00000477109 C3P01024 1663 aa18.03■□□□□ 0.48
KDM5C-211ENST00000477109 CDC42BPAQ5VT25 1732 aa18.02■□□□□ 0.48
KDM5C-211ENST00000477109 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.47
KDM5C-211ENST00000477109 FYCO1Q9BQS8 1478 aa17.99■□□□□ 0.47
KDM5C-211ENST00000477109 SAMD9LQ8IVG5 1584 aa17.97■□□□□ 0.47
KDM5C-211ENST00000477109 HNRNPMP52272 730 aaKnown RBP eCLIP17.97■□□□□ 0.47
KDM5C-211ENST00000477109 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
KDM5C-211ENST00000477109 CNTLNQ9NXG0 1405 aa17.97■□□□□ 0.47
KDM5C-211ENST00000477109 SYCP2Q9BX26 1530 aa17.96■□□□□ 0.47
KDM5C-211ENST00000477109 PTPRTO14522 1441 aa17.96■□□□□ 0.47
KDM5C-211ENST00000477109 SPAG9O60271 1321 aaKnown RBP17.96■□□□□ 0.46
KDM5C-211ENST00000477109 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
KDM5C-211ENST00000477109 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
KDM5C-211ENST00000477109 SUPT6HQ7KZ85 1726 aaKnown RBP17.92■□□□□ 0.46
KDM5C-211ENST00000477109 ZMYM3Q14202 1370 aa17.91■□□□□ 0.46
KDM5C-211ENST00000477109 CCNB3Q8WWL7 1395 aa17.91■□□□□ 0.46
KDM5C-211ENST00000477109 NCOA1Q15788 1441 aa17.9■□□□□ 0.46
KDM5C-211ENST00000477109 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.46
KDM5C-211ENST00000477109 ATP7AQ04656 1500 aa17.89■□□□□ 0.45
KDM5C-211ENST00000477109 NPATQ14207 1427 aa17.89■□□□□ 0.45
KDM5C-211ENST00000477109 MROH2AA6NES4 1674 aa17.88■□□□□ 0.45
KDM5C-211ENST00000477109 DISP3Q9P2K9 1392 aa17.88■□□□□ 0.45
KDM5C-211ENST00000477109 A2MP01023 1474 aa17.88■□□□□ 0.45
KDM5C-211ENST00000477109 PLEKHH2Q8IVE3 1493 aa17.88■□□□□ 0.45
KDM5C-211ENST00000477109 CAMSAP1Q5T5Y3 1602 aa17.87■□□□□ 0.45
KDM5C-211ENST00000477109 LTBP4Q8N2S1 1624 aa17.87■□□□□ 0.45
KDM5C-211ENST00000477109 GGT6Q6P531 493 aa17.87■□□□□ 0.45
KDM5C-211ENST00000477109 MTUS2Q5JR59 1369 aa17.87■□□□□ 0.45
KDM5C-211ENST00000477109 NCKAP5LQ9HCH0 1330 aa17.86■□□□□ 0.45
KDM5C-211ENST00000477109 INO80Q9ULG1 1556 aaPredicted RBP17.86■□□□□ 0.45
KDM5C-211ENST00000477109 CLTCQ00610 1675 aaKnown RBP17.85■□□□□ 0.45
KDM5C-211ENST00000477109 PLXNC1O60486 1568 aa17.84■□□□□ 0.45
KDM5C-211ENST00000477109 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
KDM5C-211ENST00000477109 ILDR2Q71H61 639 aa17.83■□□□□ 0.44
KDM5C-211ENST00000477109 PTPRKQ15262 1439 aa17.81■□□□□ 0.44
KDM5C-211ENST00000477109 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
KDM5C-211ENST00000477109 MYO3AQ8NEV4 1616 aa17.8■□□□□ 0.44
KDM5C-211ENST00000477109 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
KDM5C-211ENST00000477109 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
KDM5C-211ENST00000477109 MAP3K1Q13233 1512 aa17.79■□□□□ 0.44
KDM5C-211ENST00000477109 ADGBQ8N7X0 1667 aa17.77■□□□□ 0.44
KDM5C-211ENST00000477109 MBD5Q9P267 1494 aa17.77■□□□□ 0.44
KDM5C-211ENST00000477109 PKD2Q13563 968 aa17.77■□□□□ 0.44
KDM5C-211ENST00000477109 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
KDM5C-211ENST00000477109 CEP170BQ9Y4F5 1589 aaPredicted RBP17.77■□□□□ 0.44
KDM5C-211ENST00000477109 EHBP1L1Q8N3D4 1523 aa17.77■□□□□ 0.43
KDM5C-211ENST00000477109 ZNF142P52746 1687 aaPredicted RBP17.77■□□□□ 0.43
KDM5C-211ENST00000477109 PLA2R1Q13018 1463 aa17.76■□□□□ 0.43
KDM5C-211ENST00000477109 TCOF1Q13428 1488 aaKnown RBP17.74■□□□□ 0.43
KDM5C-211ENST00000477109 SPATA31D1Q6ZQQ2 1576 aa17.74■□□□□ 0.43
KDM5C-211ENST00000477109 RTEL1-TNFRSF6BF6WH68 1400 aa17.73■□□□□ 0.43
KDM5C-211ENST00000477109 UBAP1LF5GYI3 381 aa17.73■□□□□ 0.43
KDM5C-211ENST00000477109 DHX29Q7Z478 1369 aaKnown RBP17.73■□□□□ 0.43
KDM5C-211ENST00000477109 SOCS7O14512 581 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms