RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 MROH2BQ7Z745 1585 aa15.04■□□□□ -0
CHD6-207ENST00000476641 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
CHD6-207ENST00000476641 HOXB3P14651 431 aaPredicted RBP15.02■□□□□ -0
CHD6-207ENST00000476641 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
CHD6-207ENST00000476641 KRTAP3-3Q9BYR6 98 aa14.98□□□□□ -0.01
CHD6-207ENST00000476641 KRTAP3-2Q9BYR7 98 aa14.98□□□□□ -0.01
CHD6-207ENST00000476641 ZNF710Q8N1W2 664 aa14.97□□□□□ -0.01
CHD6-207ENST00000476641 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
CHD6-207ENST00000476641 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
CHD6-207ENST00000476641 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
CHD6-207ENST00000476641 DOK7Q18PE1 504 aa14.94□□□□□ -0.02
CHD6-207ENST00000476641 HOXB1P14653 301 aaPredicted RBP14.92□□□□□ -0.02
CHD6-207ENST00000476641 RNF25Q96BH1 459 aaPredicted RBP14.92□□□□□ -0.02
CHD6-207ENST00000476641 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
CHD6-207ENST00000476641 MICALL2Q8IY33 904 aa14.91□□□□□ -0.02
CHD6-207ENST00000476641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.9□□□□□ -0.02
CHD6-207ENST00000476641 ZFP91Q96JP5 570 aaPredicted RBP14.9□□□□□ -0.02
CHD6-207ENST00000476641 NESP48681 1621 aa14.89□□□□□ -0.03
CHD6-207ENST00000476641 SOX12O15370 315 aa14.88□□□□□ -0.03
CHD6-207ENST00000476641 VGFO15240 615 aaPredicted RBP14.87□□□□□ -0.03
CHD6-207ENST00000476641 ERBB3P21860 1342 aa14.86□□□□□ -0.03
CHD6-207ENST00000476641 RIMBP2O15034 1052 aa14.85□□□□□ -0.03
CHD6-207ENST00000476641 TMEM92Q6UXU6 159 aa14.85□□□□□ -0.03
CHD6-207ENST00000476641 WIZO95785 1651 aa14.84□□□□□ -0.03
CHD6-207ENST00000476641 MS4A4AQ96JQ5 239 aa14.84□□□□□ -0.03
CHD6-207ENST00000476641 PHF8Q9UPP1 1060 aa14.83□□□□□ -0.04
CHD6-207ENST00000476641 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
CHD6-207ENST00000476641 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
CHD6-207ENST00000476641 VARS2Q5ST30 1063 aaKnown RBP14.76□□□□□ -0.05
CHD6-207ENST00000476641 ZSWIM6Q9HCJ5 1215 aa14.75□□□□□ -0.05
CHD6-207ENST00000476641 BCL11BQ9C0K0 894 aaPredicted RBP14.71□□□□□ -0.05
CHD6-207ENST00000476641 NLRP6P59044 892 aa14.7□□□□□ -0.06
CHD6-207ENST00000476641 GPR153Q6NV75 609 aa14.69□□□□□ -0.06
CHD6-207ENST00000476641 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
CHD6-207ENST00000476641 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
CHD6-207ENST00000476641 CADPSQ9ULU8 1353 aa14.67□□□□□ -0.06
CHD6-207ENST00000476641 CUX2O14529 1486 aa14.67□□□□□ -0.06
CHD6-207ENST00000476641 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
CHD6-207ENST00000476641 FBXO22Q8NEZ5 403 aa14.66□□□□□ -0.06
CHD6-207ENST00000476641 ZNF687Q8N1G0 1237 aa14.64□□□□□ -0.07
CHD6-207ENST00000476641 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
CHD6-207ENST00000476641 ARSIQ5FYB1 569 aa14.63□□□□□ -0.07
CHD6-207ENST00000476641 THOC2Q8NI27 1593 aaKnown RBP14.61□□□□□ -0.07
CHD6-207ENST00000476641 PDS5BQ9NTI5 1447 aa14.61□□□□□ -0.07
CHD6-207ENST00000476641 RNF166Q96A37 237 aaPredicted RBP14.61□□□□□ -0.07
CHD6-207ENST00000476641 MFRPQ9BY79 579 aa14.6□□□□□ -0.07
CHD6-207ENST00000476641 KIF21AQ7Z4S6 1674 aa14.59□□□□□ -0.07
CHD6-207ENST00000476641 STK25O00506 426 aa14.59□□□□□ -0.07
CHD6-207ENST00000476641 KHSRPQ92945 711 aaKnown RBP eCLIP14.56□□□□□ -0.08
CHD6-207ENST00000476641 MYT1LQ9UL68 1186 aa14.56□□□□□ -0.08
CHD6-207ENST00000476641 ECM2O94769 699 aaPredicted RBP14.55□□□□□ -0.08
CHD6-207ENST00000476641 CFTRP13569 1480 aa14.53□□□□□ -0.08
CHD6-207ENST00000476641 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
CHD6-207ENST00000476641 ZNF316A6NFI3 1004 aaPredicted RBP14.52□□□□□ -0.09
CHD6-207ENST00000476641 FANCD2Q9BXW9 1451 aa14.51□□□□□ -0.09
CHD6-207ENST00000476641 C2orf72A6NCS6 295 aa14.51□□□□□ -0.09
CHD6-207ENST00000476641 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
CHD6-207ENST00000476641 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
CHD6-207ENST00000476641 KIF3CO14782 793 aa14.49□□□□□ -0.09
CHD6-207ENST00000476641 CEP164Q9UPV0 1460 aa14.48□□□□□ -0.09
CHD6-207ENST00000476641 ANKRD13DQ6ZTN6 518 aa14.47□□□□□ -0.09
CHD6-207ENST00000476641 WDR62O43379 1518 aa14.46□□□□□ -0.1
CHD6-207ENST00000476641 RGL2O15211 777 aa14.45□□□□□ -0.1
CHD6-207ENST00000476641 PTGER2P43116 358 aa14.45□□□□□ -0.1
CHD6-207ENST00000476641 NUDT7P0C024 238 aa14.43□□□□□ -0.1
CHD6-207ENST00000476641 PKD2Q13563 968 aa14.42□□□□□ -0.1
CHD6-207ENST00000476641 LSM11P83369 360 aaKnown RBP eCLIP14.41□□□□□ -0.1
CHD6-207ENST00000476641 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
CHD6-207ENST00000476641 TMC2Q8TDI7 906 aa14.4□□□□□ -0.1
CHD6-207ENST00000476641 PCDHGA4Q9Y5G9 962 aa14.38□□□□□ -0.11
CHD6-207ENST00000476641 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
CHD6-207ENST00000476641 SLC34A2O95436 690 aa14.36□□□□□ -0.11
CHD6-207ENST00000476641 LHX6Q9UPM6 363 aa14.36□□□□□ -0.11
CHD6-207ENST00000476641 PBX2P40425 430 aa14.34□□□□□ -0.11
CHD6-207ENST00000476641 PPP1R37O75864 691 aa14.33□□□□□ -0.12
CHD6-207ENST00000476641 AXIN2Q9Y2T1 843 aa14.31□□□□□ -0.12
CHD6-207ENST00000476641 POTEEQ6S8J3 1075 aa14.29□□□□□ -0.12
CHD6-207ENST00000476641 PRDM2Q13029 1718 aa14.27□□□□□ -0.13
CHD6-207ENST00000476641 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
CHD6-207ENST00000476641 ZNF608Q9ULD9 1512 aaPredicted RBP14.23□□□□□ -0.13
CHD6-207ENST00000476641 PSDA5PKW4 1024 aaPredicted RBP14.19□□□□□ -0.14
CHD6-207ENST00000476641 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
CHD6-207ENST00000476641 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
CHD6-207ENST00000476641 ARHGAP33O14559 1287 aa14.17□□□□□ -0.14
CHD6-207ENST00000476641 PTCD2Q8WV60 388 aaKnown RBP14.17□□□□□ -0.14
CHD6-207ENST00000476641 KDM4FA0A1W2PPD8 638 aa14.16□□□□□ -0.14
CHD6-207ENST00000476641 ADGRD1Q6QNK2 874 aa14.16□□□□□ -0.14
CHD6-207ENST00000476641 PLPP6Q8IY26 295 aa14.16□□□□□ -0.14
CHD6-207ENST00000476641 FOXK1P85037 733 aa14.15□□□□□ -0.14
CHD6-207ENST00000476641 HS6ST3Q8IZP7 471 aa14.14□□□□□ -0.15
CHD6-207ENST00000476641 POLA1P09884 1462 aaPredicted RBP14.13□□□□□ -0.15
CHD6-207ENST00000476641 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
CHD6-207ENST00000476641 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
CHD6-207ENST00000476641 GPHNQ9NQX3 736 aaPredicted RBP14.12□□□□□ -0.15
CHD6-207ENST00000476641 AQRO60306 1485 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHD6-207ENST00000476641 CUX1P39880 1505 aa14.11□□□□□ -0.15
CHD6-207ENST00000476641 HCSTQ9UBK5 93 aa14.1□□□□□ -0.15
CHD6-207ENST00000476641 TARBP1Q13395 1621 aaKnown RBP14.09□□□□□ -0.15
CHD6-207ENST00000476641 DSG2Q14126 1118 aa14.09□□□□□ -0.15
CHD6-207ENST00000476641 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms