RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 GABBR2O75899 941 aa17.46■□□□□ 0.39
LSG1-207ENST00000475763 PCF11O94913 1555 aaKnown RBP17.45■□□□□ 0.38
LSG1-207ENST00000475763 PRG4Q92954 1404 aaPredicted RBP17.41■□□□□ 0.38
LSG1-207ENST00000475763 CFAP43Q8NDM7 1665 aa17.39■□□□□ 0.37
LSG1-207ENST00000475763 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
LSG1-207ENST00000475763 HECW1Q76N89 1606 aa17.38■□□□□ 0.37
LSG1-207ENST00000475763 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
LSG1-207ENST00000475763 RAPGEF6Q8TEU7 1601 aa17.35■□□□□ 0.37
LSG1-207ENST00000475763 MNX1P50219 401 aaPredicted RBP17.34■□□□□ 0.37
LSG1-207ENST00000475763 TRIM26Q12899 539 aaPredicted RBP17.32■□□□□ 0.36
LSG1-207ENST00000475763 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
LSG1-207ENST00000475763 PTPRGP23470 1445 aa17.3■□□□□ 0.36
LSG1-207ENST00000475763 FKBP8Q14318 412 aa17.3■□□□□ 0.36
LSG1-207ENST00000475763 ZRANB1Q9UGI0 708 aa17.3■□□□□ 0.36
LSG1-207ENST00000475763 ABCA8O94911 1581 aa17.3■□□□□ 0.36
LSG1-207ENST00000475763 LRRC9Q6ZRR7 1453 aa17.3■□□□□ 0.36
LSG1-207ENST00000475763 ATP1B4Q9UN42 357 aaPredicted RBP17.29■□□□□ 0.36
LSG1-207ENST00000475763 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
LSG1-207ENST00000475763 EPRSP07814 1512 aaKnown RBP17.28■□□□□ 0.36
LSG1-207ENST00000475763 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
LSG1-207ENST00000475763 NUP153P49790 1475 aaKnown RBP17.27■□□□□ 0.36
LSG1-207ENST00000475763 PLB1Q6P1J6 1458 aa17.26■□□□□ 0.35
LSG1-207ENST00000475763 KANK4Q5T7N3 995 aaPredicted RBP17.26■□□□□ 0.35
LSG1-207ENST00000475763 NPM1P06748 294 aaKnown RBP eCLIP17.23■□□□□ 0.35
LSG1-207ENST00000475763 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
LSG1-207ENST00000475763 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
LSG1-207ENST00000475763 UACAQ9BZF9 1416 aa17.22■□□□□ 0.35
LSG1-207ENST00000475763 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
LSG1-207ENST00000475763 MTUS2Q5JR59 1369 aa17.2■□□□□ 0.34
LSG1-207ENST00000475763 CDK13Q14004 1512 aaKnown RBP17.2■□□□□ 0.34
LSG1-207ENST00000475763 ABCC2Q92887 1545 aa17.19■□□□□ 0.34
LSG1-207ENST00000475763 UHRF1BP1LA0JNW5 1464 aa17.18■□□□□ 0.34
LSG1-207ENST00000475763 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
LSG1-207ENST00000475763 SUPT6HQ7KZ85 1726 aaKnown RBP17.17■□□□□ 0.34
LSG1-207ENST00000475763 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
LSG1-207ENST00000475763 MAGI3Q5TCQ9 1506 aa17.15■□□□□ 0.34
LSG1-207ENST00000475763 ATP10BO94823 1461 aa17.14■□□□□ 0.33
LSG1-207ENST00000475763 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
LSG1-207ENST00000475763 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
LSG1-207ENST00000475763 CLCN6P51797 869 aa17.12■□□□□ 0.33
LSG1-207ENST00000475763 MIER1Q8N108 512 aa17.12■□□□□ 0.33
LSG1-207ENST00000475763 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
LSG1-207ENST00000475763 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
LSG1-207ENST00000475763 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
LSG1-207ENST00000475763 PHF12Q96QT6 1004 aa17.11■□□□□ 0.33
LSG1-207ENST00000475763 NCOA2Q15596 1464 aa17.11■□□□□ 0.33
LSG1-207ENST00000475763 KDM5BQ9UGL1 1544 aa17.1■□□□□ 0.33
LSG1-207ENST00000475763 ADCY10Q96PN6 1610 aa17.1■□□□□ 0.33
LSG1-207ENST00000475763 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.32
LSG1-207ENST00000475763 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
LSG1-207ENST00000475763 GALR2O43603 387 aaPredicted RBP17.07■□□□□ 0.32
LSG1-207ENST00000475763 PLEKHD1A6NEE1 506 aa17.06■□□□□ 0.32
LSG1-207ENST00000475763 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
LSG1-207ENST00000475763 CCNB3Q8WWL7 1395 aa17.05■□□□□ 0.32
LSG1-207ENST00000475763 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
LSG1-207ENST00000475763 KIF14Q15058 1648 aa17.03■□□□□ 0.32
LSG1-207ENST00000475763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.03■□□□□ 0.32
LSG1-207ENST00000475763 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
LSG1-207ENST00000475763 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
LSG1-207ENST00000475763 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
LSG1-207ENST00000475763 FGD6Q6ZV73 1430 aa17.02■□□□□ 0.31
LSG1-207ENST00000475763 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
LSG1-207ENST00000475763 TSPYL2Q9H2G4 693 aaPredicted RBP17.01■□□□□ 0.31
LSG1-207ENST00000475763 PLCD3Q8N3E9 789 aa17■□□□□ 0.31
LSG1-207ENST00000475763 MIA2Q96PC5 1412 aa17■□□□□ 0.31
LSG1-207ENST00000475763 DCBLD2Q96PD2 775 aa16.99■□□□□ 0.31
LSG1-207ENST00000475763 ITSN2Q9NZM3 1697 aa16.99■□□□□ 0.31
LSG1-207ENST00000475763 ABCC10Q5T3U5 1492 aa16.97■□□□□ 0.31
LSG1-207ENST00000475763 TCOF1Q13428 1488 aaKnown RBP16.95■□□□□ 0.3
LSG1-207ENST00000475763 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
LSG1-207ENST00000475763 GPATCH8Q9UKJ3 1502 aaKnown RBP16.93■□□□□ 0.3
LSG1-207ENST00000475763 CDC42BPAQ5VT25 1732 aa16.93■□□□□ 0.3
LSG1-207ENST00000475763 WDR7Q9Y4E6 1490 aa16.93■□□□□ 0.3
LSG1-207ENST00000475763 RASEFQ8IZ41 740 aa16.91■□□□□ 0.3
LSG1-207ENST00000475763 FAM50AQ14320 339 aaKnown RBP16.9■□□□□ 0.3
LSG1-207ENST00000475763 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
LSG1-207ENST00000475763 LHX8Q68G74 356 aa16.89■□□□□ 0.29
LSG1-207ENST00000475763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.29
LSG1-207ENST00000475763 PREX2Q70Z35 1606 aa16.88■□□□□ 0.29
LSG1-207ENST00000475763 MS4A3Q96HJ5 214 aa16.88■□□□□ 0.29
LSG1-207ENST00000475763 ASXL2Q76L83 1435 aa16.87■□□□□ 0.29
LSG1-207ENST00000475763 MYO5CQ9NQX4 1742 aa16.87■□□□□ 0.29
LSG1-207ENST00000475763 TTC37Q6PGP7 1564 aa16.87■□□□□ 0.29
LSG1-207ENST00000475763 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
LSG1-207ENST00000475763 CFDP1Q9UEE9 299 aaPredicted RBP16.86■□□□□ 0.29
LSG1-207ENST00000475763 MAPKBP1O60336 1514 aa16.86■□□□□ 0.29
LSG1-207ENST00000475763 CDC42BPBQ9Y5S2 1711 aa16.84■□□□□ 0.29
LSG1-207ENST00000475763 ARAP3Q8WWN8 1544 aa16.84■□□□□ 0.29
LSG1-207ENST00000475763 ABCA9Q8IUA7 1624 aa16.84■□□□□ 0.29
LSG1-207ENST00000475763 CAMSAP2Q08AD1 1489 aa16.83■□□□□ 0.28
LSG1-207ENST00000475763 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
LSG1-207ENST00000475763 DNMT1P26358 1616 aaKnown RBP16.81■□□□□ 0.28
LSG1-207ENST00000475763 PLCH2O75038 1416 aa16.8■□□□□ 0.28
LSG1-207ENST00000475763 NUBP1P53384 320 aa16.79■□□□□ 0.28
LSG1-207ENST00000475763 ZBTB47Q9UFB7 747 aaPredicted RBP16.79■□□□□ 0.28
LSG1-207ENST00000475763 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
LSG1-207ENST00000475763 ARHGAP5Q13017 1502 aa16.79■□□□□ 0.28
LSG1-207ENST00000475763 ITGAEP38570 1179 aa16.78■□□□□ 0.28
LSG1-207ENST00000475763 KIF12Q96FN5 646 aa16.78■□□□□ 0.28
LSG1-207ENST00000475763 PLEKHH2Q8IVE3 1493 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms