RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 RTF1Q92541 710 aaKnown RBP22.48■■□□□ 1.19
LPCAT1-202ENST00000475622 GBP4Q96PP9 640 aa22.47■■□□□ 1.19
LPCAT1-202ENST00000475622 GZF1Q9H116 711 aaPredicted RBP22.47■■□□□ 1.19
LPCAT1-202ENST00000475622 SLKQ9H2G2 1235 aaPredicted RBP22.47■■□□□ 1.19
LPCAT1-202ENST00000475622 KTN1Q86UP2 1357 aaKnown RBP22.47■■□□□ 1.19
LPCAT1-202ENST00000475622 RCAN3Q9UKA8 241 aa22.47■■□□□ 1.19
LPCAT1-202ENST00000475622 KANK1Q14678 1352 aa22.46■■□□□ 1.19
LPCAT1-202ENST00000475622 KIAA1211Q6ZU35 1233 aa22.46■■□□□ 1.19
LPCAT1-202ENST00000475622 FHAD1B1AJZ9 1412 aa22.45■■□□□ 1.18
LPCAT1-202ENST00000475622 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
LPCAT1-202ENST00000475622 GNL2Q13823 731 aaKnown RBP22.44■■□□□ 1.18
LPCAT1-202ENST00000475622 RWDD1Q9H446 243 aaPredicted RBP22.42■■□□□ 1.18
LPCAT1-202ENST00000475622 CLSTN1O94985 981 aa22.41■■□□□ 1.18
LPCAT1-202ENST00000475622 ITPRIPQ8IWB1 547 aa22.41■■□□□ 1.18
LPCAT1-202ENST00000475622 AMER1Q5JTC6 1135 aaPredicted RBP22.41■■□□□ 1.18
LPCAT1-202ENST00000475622 TCERG1O14776 1098 aaKnown RBP22.41■■□□□ 1.18
LPCAT1-202ENST00000475622 KIAA2012Q0VF49 1180 aa22.41■■□□□ 1.18
LPCAT1-202ENST00000475622 SETD5Q9C0A6 1442 aa22.41■■□□□ 1.18
LPCAT1-202ENST00000475622 PKD2Q13563 968 aa22.4■■□□□ 1.18
LPCAT1-202ENST00000475622 U2AF1L5P0DN76 240 aaPredicted RBP22.4■■□□□ 1.18
LPCAT1-202ENST00000475622 U2AF1Q01081 240 aaKnown RBP eCLIP22.4■■□□□ 1.18
LPCAT1-202ENST00000475622 ISY1Q9ULR0 285 aaKnown RBP22.4■■□□□ 1.18
LPCAT1-202ENST00000475622 HDGFP51858 240 aaKnown RBP22.39■■□□□ 1.17
LPCAT1-202ENST00000475622 FOXD1Q16676 465 aa22.39■■□□□ 1.17
LPCAT1-202ENST00000475622 STK26Q9P289 416 aa22.39■■□□□ 1.17
LPCAT1-202ENST00000475622 PTMSP20962 102 aa22.39■■□□□ 1.17
LPCAT1-202ENST00000475622 MLECQ14165 292 aa22.39■■□□□ 1.17
LPCAT1-202ENST00000475622 HDGFL2Q7Z4V5 671 aaPredicted RBP22.37■■□□□ 1.17
LPCAT1-202ENST00000475622 ARID3AQ99856 593 aa22.35■■□□□ 1.17
LPCAT1-202ENST00000475622 RALBP1Q15311 655 aa22.34■■□□□ 1.17
LPCAT1-202ENST00000475622 CALD1Q05682 793 aaKnown RBP22.33■■□□□ 1.17
LPCAT1-202ENST00000475622 MFAP1P55081 439 aaKnown RBP22.32■■□□□ 1.16
LPCAT1-202ENST00000475622 NCBP3Q53F19 620 aaKnown RBP22.32■■□□□ 1.16
LPCAT1-202ENST00000475622 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
LPCAT1-202ENST00000475622 GGT6Q6P531 493 aa22.31■■□□□ 1.16
LPCAT1-202ENST00000475622 SYAP1Q96A49 352 aaPredicted RBP22.31■■□□□ 1.16
LPCAT1-202ENST00000475622 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
LPCAT1-202ENST00000475622 HTATSF1O43719 755 aaKnown RBP22.3■■□□□ 1.16
LPCAT1-202ENST00000475622 PMFBP1Q8TBY8 1022 aa22.29■■□□□ 1.16
LPCAT1-202ENST00000475622 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
LPCAT1-202ENST00000475622 ROCK2O75116 1388 aaKnown RBP22.29■■□□□ 1.16
LPCAT1-202ENST00000475622 GOLGA6L3A6NEY3 463 aa22.28■■□□□ 1.16
LPCAT1-202ENST00000475622 TSHZ2Q9NRE2 1034 aa22.27■■□□□ 1.16
LPCAT1-202ENST00000475622 IPO9Q96P70 1041 aaKnown RBP22.27■■□□□ 1.16
LPCAT1-202ENST00000475622 ARHGAP35Q9NRY4 1499 aa22.26■■□□□ 1.15
LPCAT1-202ENST00000475622 ZNF330Q9Y3S2 320 aaPredicted RBP22.26■■□□□ 1.15
LPCAT1-202ENST00000475622 SMC4Q9NTJ3 1288 aa22.26■■□□□ 1.15
LPCAT1-202ENST00000475622 KANK4Q5T7N3 995 aaPredicted RBP22.25■■□□□ 1.15
LPCAT1-202ENST00000475622 SOGA1O94964 1423 aa22.25■■□□□ 1.15
LPCAT1-202ENST00000475622 MPHOSPH9Q99550 1183 aa22.24■■□□□ 1.15
LPCAT1-202ENST00000475622 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.24■■□□□ 1.15
LPCAT1-202ENST00000475622 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
LPCAT1-202ENST00000475622 CLUAP1Q96AJ1 413 aa22.23■■□□□ 1.15
LPCAT1-202ENST00000475622 STK31Q9BXU1 1019 aa22.23■■□□□ 1.15
LPCAT1-202ENST00000475622 CUX2O14529 1486 aa22.23■■□□□ 1.15
LPCAT1-202ENST00000475622 TRIM6-TRIM34B2RNG4 842 aa22.22■■□□□ 1.15
LPCAT1-202ENST00000475622 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
LPCAT1-202ENST00000475622 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
LPCAT1-202ENST00000475622 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
LPCAT1-202ENST00000475622 FOXD4L1Q9NU39 408 aa22.2■■□□□ 1.14
LPCAT1-202ENST00000475622 TPM4P67936 248 aa22.2■■□□□ 1.14
LPCAT1-202ENST00000475622 NOC3LQ8WTT2 800 aaKnown RBP22.19■■□□□ 1.14
LPCAT1-202ENST00000475622 NUP155O75694 1391 aa22.19■■□□□ 1.14
LPCAT1-202ENST00000475622 GORABQ5T7V8 394 aa22.19■■□□□ 1.14
LPCAT1-202ENST00000475622 CSB-PGBD3P0DP91 1061 aa22.18■■□□□ 1.14
LPCAT1-202ENST00000475622 HMMRO75330 724 aa22.18■■□□□ 1.14
LPCAT1-202ENST00000475622 HSP90B1P14625 803 aaKnown RBP22.18■■□□□ 1.14
LPCAT1-202ENST00000475622 NOL8Q76FK4 1167 aaKnown RBP22.18■■□□□ 1.14
LPCAT1-202ENST00000475622 CCDC146Q8IYE0 955 aa22.17■■□□□ 1.14
LPCAT1-202ENST00000475622 SPAG9O60271 1321 aaKnown RBP22.17■■□□□ 1.14
LPCAT1-202ENST00000475622 GPATCH3Q96I76 525 aa22.16■■□□□ 1.14
LPCAT1-202ENST00000475622 CHMP3Q9Y3E7 222 aa22.15■■□□□ 1.14
LPCAT1-202ENST00000475622 SLC4A10Q6U841 1118 aa22.15■■□□□ 1.14
LPCAT1-202ENST00000475622 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
LPCAT1-202ENST00000475622 CENPJQ9HC77 1338 aaPredicted RBP22.15■■□□□ 1.14
LPCAT1-202ENST00000475622 NLRP13Q86W25 1043 aa22.13■■□□□ 1.13
LPCAT1-202ENST00000475622 CCDC34Q96HJ3 373 aa22.13■■□□□ 1.13
LPCAT1-202ENST00000475622 CSPP1Q1MSJ5 1256 aa22.12■■□□□ 1.13
LPCAT1-202ENST00000475622 PDE3BQ13370 1112 aa22.11■■□□□ 1.13
LPCAT1-202ENST00000475622 TNNT3P45378 269 aaPredicted RBP22.11■■□□□ 1.13
LPCAT1-202ENST00000475622 L3MBTL2Q969R5 705 aa22.1■■□□□ 1.13
LPCAT1-202ENST00000475622 HDAC5Q9UQL6 1122 aa22.1■■□□□ 1.13
LPCAT1-202ENST00000475622 EIF3AQ14152 1382 aaKnown RBP22.09■■□□□ 1.13
LPCAT1-202ENST00000475622 TAF7LQ5H9L4 462 aa22.09■■□□□ 1.13
LPCAT1-202ENST00000475622 TERF2IPQ9NYB0 399 aa22.09■■□□□ 1.13
LPCAT1-202ENST00000475622 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.12
LPCAT1-202ENST00000475622 ST18O60284 1047 aa22.07■■□□□ 1.12
LPCAT1-202ENST00000475622 FOXD4L5Q5VV16 416 aaPredicted RBP22.07■■□□□ 1.12
LPCAT1-202ENST00000475622 FOXD4L4Q8WXT5 416 aaPredicted RBP22.07■■□□□ 1.12
LPCAT1-202ENST00000475622 ANKRD30AQ9BXX3 1397 aa22.07■■□□□ 1.12
LPCAT1-202ENST00000475622 RASSF8Q8NHQ8 419 aa22.07■■□□□ 1.12
LPCAT1-202ENST00000475622 CREBRFQ8IUR6 639 aa22.05■■□□□ 1.12
LPCAT1-202ENST00000475622 GOLGA6L1Q8N7Z2 621 aa22.05■■□□□ 1.12
LPCAT1-202ENST00000475622 PHF14O94880 888 aa22.04■■□□□ 1.12
LPCAT1-202ENST00000475622 EFCAB2Q5VUJ9 269 aa22.03■■□□□ 1.12
LPCAT1-202ENST00000475622 KIF16BQ96L93 1317 aa22.03■■□□□ 1.12
LPCAT1-202ENST00000475622 FMN1Q68DA7 1419 aa22.03■■□□□ 1.12
LPCAT1-202ENST00000475622 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
LPCAT1-202ENST00000475622 LMOD3Q0VAK6 560 aa22.02■■□□□ 1.12
LPCAT1-202ENST00000475622 A0A0U1RQG5 324 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms