RNA–Protein interactions for RNA: ENST00000475614.6

CCDC30-208, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,001 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-208ENST00000475614 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
CCDC30-208ENST00000475614 SMARCA4P51532 1647 aa12.11□□□□□ -0.47
CCDC30-208ENST00000475614 BAZ1AQ9NRL2 1556 aaPredicted RBP12.11□□□□□ -0.47
CCDC30-208ENST00000475614 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
CCDC30-208ENST00000475614 BOLA1Q9Y3E2 137 aa12.11□□□□□ -0.47
CCDC30-208ENST00000475614 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
CCDC30-208ENST00000475614 STK25O00506 426 aa12.1□□□□□ -0.47
CCDC30-208ENST00000475614 EFCAB3Q8N7B9 438 aa12.09□□□□□ -0.47
CCDC30-208ENST00000475614 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
CCDC30-208ENST00000475614 SOX12O15370 315 aa12.06□□□□□ -0.48
CCDC30-208ENST00000475614 HOXB3P14651 431 aaPredicted RBP12.06□□□□□ -0.48
CCDC30-208ENST00000475614 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
CCDC30-208ENST00000475614 FAM205CA6NFA0 338 aa12.05□□□□□ -0.48
CCDC30-208ENST00000475614 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
CCDC30-208ENST00000475614 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
CCDC30-208ENST00000475614 MROH2BQ7Z745 1585 aa12.04□□□□□ -0.48
CCDC30-208ENST00000475614 G3V3G9 751 aa12.03□□□□□ -0.48
CCDC30-208ENST00000475614 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
CCDC30-208ENST00000475614 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
CCDC30-208ENST00000475614 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
CCDC30-208ENST00000475614 SMARCA2P51531 1590 aa11.98□□□□□ -0.49
CCDC30-208ENST00000475614 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
CCDC30-208ENST00000475614 CHGAP10645 457 aaKnown RBP11.97□□□□□ -0.49
CCDC30-208ENST00000475614 NLRP6P59044 892 aa11.96□□□□□ -0.49
CCDC30-208ENST00000475614 NCAPD3P42695 1498 aa11.95□□□□□ -0.5
CCDC30-208ENST00000475614 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
CCDC30-208ENST00000475614 RSF1Q96T23 1441 aaPredicted RBP11.94□□□□□ -0.5
CCDC30-208ENST00000475614 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
CCDC30-208ENST00000475614 TMEM92Q6UXU6 159 aa11.94□□□□□ -0.5
CCDC30-208ENST00000475614 HMGXB3Q12766 1538 aa11.94□□□□□ -0.5
CCDC30-208ENST00000475614 WIZO95785 1651 aa11.94□□□□□ -0.5
CCDC30-208ENST00000475614 MICALL2Q8IY33 904 aa11.93□□□□□ -0.5
CCDC30-208ENST00000475614 ZNF710Q8N1W2 664 aa11.92□□□□□ -0.5
CCDC30-208ENST00000475614 MS4A4AQ96JQ5 239 aa11.92□□□□□ -0.5
CCDC30-208ENST00000475614 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
CCDC30-208ENST00000475614 DNAJC5Q9H3Z4 198 aa11.92□□□□□ -0.5
CCDC30-208ENST00000475614 DOK7Q18PE1 504 aa11.91□□□□□ -0.5
CCDC30-208ENST00000475614 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
CCDC30-208ENST00000475614 BAZ1BQ9UIG0 1483 aaKnown RBP11.86□□□□□ -0.51
CCDC30-208ENST00000475614 ERBB3P21860 1342 aa11.86□□□□□ -0.51
CCDC30-208ENST00000475614 RYDENQ9NUL5 291 aaKnown RBP11.82□□□□□ -0.52
CCDC30-208ENST00000475614 TOP2AP11388 1531 aaKnown RBP11.81□□□□□ -0.52
CCDC30-208ENST00000475614 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
CCDC30-208ENST00000475614 VARS2Q5ST30 1063 aaKnown RBP11.81□□□□□ -0.52
CCDC30-208ENST00000475614 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
CCDC30-208ENST00000475614 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
CCDC30-208ENST00000475614 ZSWIM6Q9HCJ5 1215 aa11.78□□□□□ -0.52
CCDC30-208ENST00000475614 ZNF687Q8N1G0 1237 aa11.72□□□□□ -0.53
CCDC30-208ENST00000475614 PPP1R37O75864 691 aa11.71□□□□□ -0.53
CCDC30-208ENST00000475614 ARSIQ5FYB1 569 aa11.71□□□□□ -0.53
CCDC30-208ENST00000475614 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
CCDC30-208ENST00000475614 KHSRPQ92945 711 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC30-208ENST00000475614 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
CCDC30-208ENST00000475614 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
CCDC30-208ENST00000475614 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
CCDC30-208ENST00000475614 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
CCDC30-208ENST00000475614 KIF3CO14782 793 aa11.64□□□□□ -0.55
CCDC30-208ENST00000475614 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
CCDC30-208ENST00000475614 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
CCDC30-208ENST00000475614 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
CCDC30-208ENST00000475614 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
CCDC30-208ENST00000475614 C2orf72A6NCS6 295 aa11.61□□□□□ -0.55
CCDC30-208ENST00000475614 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
CCDC30-208ENST00000475614 TMC2Q8TDI7 906 aa11.59□□□□□ -0.55
CCDC30-208ENST00000475614 CADPSQ9ULU8 1353 aa11.58□□□□□ -0.56
CCDC30-208ENST00000475614 NESP48681 1621 aa11.58□□□□□ -0.56
CCDC30-208ENST00000475614 CFTRP13569 1480 aa11.57□□□□□ -0.56
CCDC30-208ENST00000475614 ANKRD13DQ6ZTN6 518 aa11.55□□□□□ -0.56
CCDC30-208ENST00000475614 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
CCDC30-208ENST00000475614 NUDT7P0C024 238 aa11.54□□□□□ -0.56
CCDC30-208ENST00000475614 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.56
CCDC30-208ENST00000475614 LSM11P83369 360 aaKnown RBP eCLIP11.52□□□□□ -0.57
CCDC30-208ENST00000475614 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
CCDC30-208ENST00000475614 PTGER2P43116 358 aa11.51□□□□□ -0.57
CCDC30-208ENST00000475614 POTEEQ6S8J3 1075 aa11.5□□□□□ -0.57
CCDC30-208ENST00000475614 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
CCDC30-208ENST00000475614 PCDHGA4Q9Y5G9 962 aa11.5□□□□□ -0.57
CCDC30-208ENST00000475614 SLC34A2O95436 690 aa11.49□□□□□ -0.57
CCDC30-208ENST00000475614 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
CCDC30-208ENST00000475614 CRISPLD2Q9H0B8 497 aa11.48□□□□□ -0.57
CCDC30-208ENST00000475614 PDS5BQ9NTI5 1447 aa11.48□□□□□ -0.57
CCDC30-208ENST00000475614 PDE4AP27815 886 aa11.47□□□□□ -0.57
CCDC30-208ENST00000475614 FOXK1P85037 733 aa11.47□□□□□ -0.57
CCDC30-208ENST00000475614 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
CCDC30-208ENST00000475614 AXIN2Q9Y2T1 843 aa11.46□□□□□ -0.57
CCDC30-208ENST00000475614 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
CCDC30-208ENST00000475614 THOC2Q8NI27 1593 aaKnown RBP11.44□□□□□ -0.58
CCDC30-208ENST00000475614 PBX2P40425 430 aa11.43□□□□□ -0.58
CCDC30-208ENST00000475614 ERCC6Q03468 1493 aa11.43□□□□□ -0.58
CCDC30-208ENST00000475614 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
CCDC30-208ENST00000475614 DSG2Q14126 1118 aa11.42□□□□□ -0.58
CCDC30-208ENST00000475614 PLPP6Q8IY26 295 aa11.42□□□□□ -0.58
CCDC30-208ENST00000475614 CEP164Q9UPV0 1460 aa11.42□□□□□ -0.58
CCDC30-208ENST00000475614 KDM4FA0A1W2PPD8 638 aa11.39□□□□□ -0.59
CCDC30-208ENST00000475614 PPP1R15BQ5SWA1 713 aa11.39□□□□□ -0.59
CCDC30-208ENST00000475614 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
CCDC30-208ENST00000475614 LARP6Q9BRS8 491 aaKnown RBP11.38□□□□□ -0.59
CCDC30-208ENST00000475614 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
CCDC30-208ENST00000475614 WDR62O43379 1518 aa11.37□□□□□ -0.59
CCDC30-208ENST00000475614 MFSD10Q14728 455 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms