RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
SEMA4D-217ENST00000475255 SALL2Q9Y467 1007 aaPredicted RBP18.63■□□□□ 0.57
SEMA4D-217ENST00000475255 SUPT6HQ7KZ85 1726 aaKnown RBP18.63■□□□□ 0.57
SEMA4D-217ENST00000475255 DNMBPQ6XZF7 1577 aa18.62■□□□□ 0.57
SEMA4D-217ENST00000475255 NPM2Q86SE8 214 aaKnown RBP18.6■□□□□ 0.57
SEMA4D-217ENST00000475255 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
SEMA4D-217ENST00000475255 CDK13Q14004 1512 aaKnown RBP18.58■□□□□ 0.57
SEMA4D-217ENST00000475255 EHBP1L1Q8N3D4 1523 aa18.58■□□□□ 0.57
SEMA4D-217ENST00000475255 CUL7Q14999 1698 aa18.57■□□□□ 0.56
SEMA4D-217ENST00000475255 NUDCQ9Y266 331 aa18.57■□□□□ 0.56
SEMA4D-217ENST00000475255 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
SEMA4D-217ENST00000475255 ANKRD30BQ9BXX2 1392 aa18.56■□□□□ 0.56
SEMA4D-217ENST00000475255 ANP32AP39687 249 aaKnown RBP18.55■□□□□ 0.56
SEMA4D-217ENST00000475255 SAMD9Q5K651 1589 aa18.53■□□□□ 0.56
SEMA4D-217ENST00000475255 RTN4Q9NQC3 1192 aaKnown RBP18.53■□□□□ 0.56
SEMA4D-217ENST00000475255 HECW1Q76N89 1606 aa18.53■□□□□ 0.56
SEMA4D-217ENST00000475255 GAPVD1Q14C86 1478 aa18.53■□□□□ 0.56
SEMA4D-217ENST00000475255 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.55
SEMA4D-217ENST00000475255 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
SEMA4D-217ENST00000475255 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
SEMA4D-217ENST00000475255 ZNF777Q9ULD5 760 aaPredicted RBP18.51■□□□□ 0.55
SEMA4D-217ENST00000475255 IPO9Q96P70 1041 aaKnown RBP18.51■□□□□ 0.55
SEMA4D-217ENST00000475255 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
SEMA4D-217ENST00000475255 RTL5Q5HYW3 569 aaPredicted RBP18.51■□□□□ 0.55
SEMA4D-217ENST00000475255 SPATA31E1Q6ZUB1 1445 aa18.5■□□□□ 0.55
SEMA4D-217ENST00000475255 SMG6Q86US8 1419 aaKnown RBP18.5■□□□□ 0.55
SEMA4D-217ENST00000475255 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
SEMA4D-217ENST00000475255 DHX29Q7Z478 1369 aaKnown RBP18.5■□□□□ 0.55
SEMA4D-217ENST00000475255 TEX14Q8IWB6 1497 aa18.49■□□□□ 0.55
SEMA4D-217ENST00000475255 GCC2Q8IWJ2 1684 aa18.49■□□□□ 0.55
SEMA4D-217ENST00000475255 ARHGEF11O15085 1522 aa18.48■□□□□ 0.55
SEMA4D-217ENST00000475255 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
SEMA4D-217ENST00000475255 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
SEMA4D-217ENST00000475255 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
SEMA4D-217ENST00000475255 SKAP1Q86WV1 359 aa18.48■□□□□ 0.55
SEMA4D-217ENST00000475255 EPRSP07814 1512 aaKnown RBP18.47■□□□□ 0.55
SEMA4D-217ENST00000475255 USP47Q96K76 1375 aa18.47■□□□□ 0.55
SEMA4D-217ENST00000475255 EXOC6Q8TAG9 804 aa18.46■□□□□ 0.55
SEMA4D-217ENST00000475255 MYT1LQ9UL68 1186 aa18.46■□□□□ 0.55
SEMA4D-217ENST00000475255 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
SEMA4D-217ENST00000475255 PNISRQ8TF01 805 aaKnown RBP18.46■□□□□ 0.54
SEMA4D-217ENST00000475255 DAPK1P53355 1430 aa18.43■□□□□ 0.54
SEMA4D-217ENST00000475255 ABCC5O15440 1437 aa18.43■□□□□ 0.54
SEMA4D-217ENST00000475255 PKD2Q13563 968 aa18.43■□□□□ 0.54
SEMA4D-217ENST00000475255 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
SEMA4D-217ENST00000475255 IL27Q8NEV9 243 aa18.41■□□□□ 0.54
SEMA4D-217ENST00000475255 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
SEMA4D-217ENST00000475255 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
SEMA4D-217ENST00000475255 BCORL1Q5H9F3 1711 aa18.4■□□□□ 0.54
SEMA4D-217ENST00000475255 CARD11Q9BXL7 1154 aa18.39■□□□□ 0.53
SEMA4D-217ENST00000475255 MIA2Q96PC5 1412 aa18.38■□□□□ 0.53
SEMA4D-217ENST00000475255 ST20-MTHFSA0A0A6YYL1 179 aa18.38■□□□□ 0.53
SEMA4D-217ENST00000475255 PLIN1O60240 522 aa18.38■□□□□ 0.53
SEMA4D-217ENST00000475255 ABCA5Q8WWZ7 1642 aa18.37■□□□□ 0.53
SEMA4D-217ENST00000475255 CDCA7LQ96GN5 454 aa18.36■□□□□ 0.53
SEMA4D-217ENST00000475255 RRP1P56182 461 aaKnown RBP18.35■□□□□ 0.53
SEMA4D-217ENST00000475255 CFDP1Q9UEE9 299 aaPredicted RBP18.35■□□□□ 0.53
SEMA4D-217ENST00000475255 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
SEMA4D-217ENST00000475255 PZPP20742 1482 aa18.34■□□□□ 0.53
SEMA4D-217ENST00000475255 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.53
SEMA4D-217ENST00000475255 NEFMP07197 916 aa18.33■□□□□ 0.52
SEMA4D-217ENST00000475255 PDE4AP27815 886 aa18.33■□□□□ 0.52
SEMA4D-217ENST00000475255 ROCK1Q13464 1354 aa18.31■□□□□ 0.52
SEMA4D-217ENST00000475255 DCAF11Q8TEB1 546 aa18.3■□□□□ 0.52
SEMA4D-217ENST00000475255 PRG4Q92954 1404 aaPredicted RBP18.29■□□□□ 0.52
SEMA4D-217ENST00000475255 WDR62O43379 1518 aa18.29■□□□□ 0.52
SEMA4D-217ENST00000475255 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.28■□□□□ 0.52
SEMA4D-217ENST00000475255 IQGAP2Q13576 1575 aa18.28■□□□□ 0.52
SEMA4D-217ENST00000475255 SLC4A3P48751 1232 aa18.28■□□□□ 0.52
SEMA4D-217ENST00000475255 CC2D1BQ5T0F9 858 aaKnown RBP18.26■□□□□ 0.51
SEMA4D-217ENST00000475255 KIAA1107Q9UPP5 1409 aa18.26■□□□□ 0.51
SEMA4D-217ENST00000475255 MYBBP1AQ9BQG0 1328 aaKnown RBP18.25■□□□□ 0.51
SEMA4D-217ENST00000475255 RGL3Q3MIN7 710 aa18.25■□□□□ 0.51
SEMA4D-217ENST00000475255 DNMT1P26358 1616 aaKnown RBP18.25■□□□□ 0.51
SEMA4D-217ENST00000475255 KIF15Q9NS87 1388 aa18.25■□□□□ 0.51
SEMA4D-217ENST00000475255 POLR1AO95602 1720 aaPredicted RBP18.24■□□□□ 0.51
SEMA4D-217ENST00000475255 NUP155O75694 1391 aa18.24■□□□□ 0.51
SEMA4D-217ENST00000475255 BACH2Q9BYV9 841 aa18.23■□□□□ 0.51
SEMA4D-217ENST00000475255 MBD5Q9P267 1494 aa18.23■□□□□ 0.51
SEMA4D-217ENST00000475255 TCERG1O14776 1098 aaKnown RBP18.23■□□□□ 0.51
SEMA4D-217ENST00000475255 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
SEMA4D-217ENST00000475255 NUP153P49790 1475 aaKnown RBP18.21■□□□□ 0.51
SEMA4D-217ENST00000475255 LRPPRCP42704 1394 aaKnown RBP18.21■□□□□ 0.51
SEMA4D-217ENST00000475255 KDM5CP41229 1560 aa18.21■□□□□ 0.51
SEMA4D-217ENST00000475255 CAMSAP2Q08AD1 1489 aa18.2■□□□□ 0.5
SEMA4D-217ENST00000475255 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
SEMA4D-217ENST00000475255 NBPF1Q3BBV0 1214 aa18.19■□□□□ 0.5
SEMA4D-217ENST00000475255 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
SEMA4D-217ENST00000475255 BRD4O60885 1362 aaPredicted RBP18.18■□□□□ 0.5
SEMA4D-217ENST00000475255 RALBP1Q15311 655 aa18.18■□□□□ 0.5
SEMA4D-217ENST00000475255 FBLN2P98095 1184 aa18.17■□□□□ 0.5
SEMA4D-217ENST00000475255 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
SEMA4D-217ENST00000475255 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
SEMA4D-217ENST00000475255 NLRP13Q86W25 1043 aa18.16■□□□□ 0.5
SEMA4D-217ENST00000475255 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
SEMA4D-217ENST00000475255 ARID4BQ4LE39 1312 aaPredicted RBP18.14■□□□□ 0.49
SEMA4D-217ENST00000475255 ANKRD30AQ9BXX3 1397 aa18.14■□□□□ 0.49
SEMA4D-217ENST00000475255 KIF14Q15058 1648 aa18.14■□□□□ 0.49
SEMA4D-217ENST00000475255 HNRNPMP52272 730 aaKnown RBP eCLIP18.13■□□□□ 0.49
SEMA4D-217ENST00000475255 BRPF3Q9ULD4 1205 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms