RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PTPRGP23470 1445 aa10.23□□□□□ -0.77
ATG4A-207ENST00000474825 NUP153P49790 1475 aaKnown RBP10.23□□□□□ -0.77
ATG4A-207ENST00000474825 EPRSP07814 1512 aaKnown RBP10.23□□□□□ -0.77
ATG4A-207ENST00000474825 HECW1Q76N89 1606 aa10.22□□□□□ -0.77
ATG4A-207ENST00000474825 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
ATG4A-207ENST00000474825 SPDYE1Q8NFV5 336 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-207ENST00000474825 PLB1Q6P1J6 1458 aa10.21□□□□□ -0.78
ATG4A-207ENST00000474825 RAPGEF6Q8TEU7 1601 aa10.21□□□□□ -0.78
ATG4A-207ENST00000474825 ATXN8OSP0DMR3 200 aa10.2□□□□□ -0.78
ATG4A-207ENST00000474825 ERCC6L2Q5T890 1561 aa10.2□□□□□ -0.78
ATG4A-207ENST00000474825 PCGF6Q9BYE7 350 aa10.19□□□□□ -0.78
ATG4A-207ENST00000474825 LRRIQ1Q96JM4 1722 aa10.19□□□□□ -0.78
ATG4A-207ENST00000474825 UHRF1BP1LA0JNW5 1464 aa10.18□□□□□ -0.78
ATG4A-207ENST00000474825 UACAQ9BZF9 1416 aa10.18□□□□□ -0.78
ATG4A-207ENST00000474825 RRBP1Q9P2E9 1410 aaKnown RBP10.18□□□□□ -0.78
ATG4A-207ENST00000474825 GABBR2O75899 941 aa10.17□□□□□ -0.78
ATG4A-207ENST00000474825 LHX8Q68G74 356 aa10.17□□□□□ -0.78
ATG4A-207ENST00000474825 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
ATG4A-207ENST00000474825 MAGI3Q5TCQ9 1506 aa10.17□□□□□ -0.78
ATG4A-207ENST00000474825 EHBP1L1Q8N3D4 1523 aa10.17□□□□□ -0.78
ATG4A-207ENST00000474825 ATP10BO94823 1461 aa10.17□□□□□ -0.78
ATG4A-207ENST00000474825 ATP1B4Q9UN42 357 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-207ENST00000474825 MTUS2Q5JR59 1369 aa10.15□□□□□ -0.78
ATG4A-207ENST00000474825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.15□□□□□ -0.78
ATG4A-207ENST00000474825 CDK13Q14004 1512 aaKnown RBP10.15□□□□□ -0.78
ATG4A-207ENST00000474825 PHLDB1Q86UU1 1377 aa10.14□□□□□ -0.79
ATG4A-207ENST00000474825 ABCC2Q92887 1545 aa10.14□□□□□ -0.79
ATG4A-207ENST00000474825 CDK11AQ9UQ88 783 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-207ENST00000474825 TROQ12816 1431 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-207ENST00000474825 KDM5BQ9UGL1 1544 aa10.12□□□□□ -0.79
ATG4A-207ENST00000474825 NCOA2Q15596 1464 aa10.12□□□□□ -0.79
ATG4A-207ENST00000474825 SSUH2Q9Y2M2 353 aa10.12□□□□□ -0.79
ATG4A-207ENST00000474825 CCNB3Q8WWL7 1395 aa10.12□□□□□ -0.79
ATG4A-207ENST00000474825 ZBTB22O15209 634 aa10.11□□□□□ -0.79
ATG4A-207ENST00000474825 TTBK1Q5TCY1 1321 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-207ENST00000474825 MYOM3Q5VTT5 1437 aa10.09□□□□□ -0.79
ATG4A-207ENST00000474825 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
ATG4A-207ENST00000474825 SUPT6HQ7KZ85 1726 aaKnown RBP10.09□□□□□ -0.79
ATG4A-207ENST00000474825 FGD6Q6ZV73 1430 aa10.08□□□□□ -0.8
ATG4A-207ENST00000474825 MIA2Q96PC5 1412 aa10.08□□□□□ -0.8
ATG4A-207ENST00000474825 ADCY10Q96PN6 1610 aa10.08□□□□□ -0.8
ATG4A-207ENST00000474825 TCOF1Q13428 1488 aaKnown RBP10.06□□□□□ -0.8
ATG4A-207ENST00000474825 ABCC10Q5T3U5 1492 aa10.06□□□□□ -0.8
ATG4A-207ENST00000474825 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-207ENST00000474825 ARID3CA6NKF2 412 aa10.05□□□□□ -0.8
ATG4A-207ENST00000474825 MKRN4PQ13434 485 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-207ENST00000474825 GPATCH8Q9UKJ3 1502 aaKnown RBP10.04□□□□□ -0.8
ATG4A-207ENST00000474825 ZCCHC11Q5TAX3 1644 aaKnown RBP10.03□□□□□ -0.8
ATG4A-207ENST00000474825 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
ATG4A-207ENST00000474825 KIF14Q15058 1648 aa10.01□□□□□ -0.81
ATG4A-207ENST00000474825 CHADLQ6NUI6 762 aa10.01□□□□□ -0.81
ATG4A-207ENST00000474825 WDR7Q9Y4E6 1490 aa9.99□□□□□ -0.81
ATG4A-207ENST00000474825 HRCP23327 699 aa9.99□□□□□ -0.81
ATG4A-207ENST00000474825 PTPN23Q9H3S7 1636 aa9.99□□□□□ -0.81
ATG4A-207ENST00000474825 PTPRKQ15262 1439 aa9.98□□□□□ -0.81
ATG4A-207ENST00000474825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
ATG4A-207ENST00000474825 ASXL2Q76L83 1435 aa9.97□□□□□ -0.81
ATG4A-207ENST00000474825 ARAP3Q8WWN8 1544 aa9.97□□□□□ -0.81
ATG4A-207ENST00000474825 ITSN2Q9NZM3 1697 aa9.96□□□□□ -0.81
ATG4A-207ENST00000474825 PRR29P0C7W0 189 aa9.96□□□□□ -0.82
ATG4A-207ENST00000474825 FAM50AQ14320 339 aaKnown RBP9.96□□□□□ -0.82
ATG4A-207ENST00000474825 CFDP1Q9UEE9 299 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-207ENST00000474825 PLCH2O75038 1416 aa9.96□□□□□ -0.82
ATG4A-207ENST00000474825 AKNAQ7Z591 1439 aa9.96□□□□□ -0.82
ATG4A-207ENST00000474825 POTEIP0CG38 1075 aa9.95□□□□□ -0.82
ATG4A-207ENST00000474825 ABCC5O15440 1437 aa9.95□□□□□ -0.82
ATG4A-207ENST00000474825 MAPKBP1O60336 1514 aa9.95□□□□□ -0.82
ATG4A-207ENST00000474825 CDC42BPAQ5VT25 1732 aa9.94□□□□□ -0.82
ATG4A-207ENST00000474825 KIAA1107Q9UPP5 1409 aa9.94□□□□□ -0.82
ATG4A-207ENST00000474825 ROCK1Q13464 1354 aa9.94□□□□□ -0.82
ATG4A-207ENST00000474825 ZNF644Q9H582 1327 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-207ENST00000474825 CLCN6P51797 869 aa9.94□□□□□ -0.82
ATG4A-207ENST00000474825 PREX2Q70Z35 1606 aa9.93□□□□□ -0.82
ATG4A-207ENST00000474825 TTC37Q6PGP7 1564 aa9.93□□□□□ -0.82
ATG4A-207ENST00000474825 CAMSAP2Q08AD1 1489 aa9.93□□□□□ -0.82
ATG4A-207ENST00000474825 MBD5Q9P267 1494 aa9.93□□□□□ -0.82
ATG4A-207ENST00000474825 HFM1A2PYH4 1435 aa9.93□□□□□ -0.82
ATG4A-207ENST00000474825 RSPH4AQ5TD94 716 aa9.93□□□□□ -0.82
ATG4A-207ENST00000474825 ABCA9Q8IUA7 1624 aa9.93□□□□□ -0.82
ATG4A-207ENST00000474825 DAPK1P53355 1430 aa9.92□□□□□ -0.82
ATG4A-207ENST00000474825 SETD5Q9C0A6 1442 aa9.92□□□□□ -0.82
ATG4A-207ENST00000474825 DNMT1P26358 1616 aaKnown RBP9.92□□□□□ -0.82
ATG4A-207ENST00000474825 CD44P16070 742 aaKnown RBP9.91□□□□□ -0.82
ATG4A-207ENST00000474825 FAM69CQ0P6D2 419 aa9.91□□□□□ -0.82
ATG4A-207ENST00000474825 KCNH8Q96L42 1107 aa9.91□□□□□ -0.82
ATG4A-207ENST00000474825 ARHGEF5Q12774 1597 aa9.91□□□□□ -0.82
ATG4A-207ENST00000474825 ADGRL2O95490 1459 aa9.91□□□□□ -0.82
ATG4A-207ENST00000474825 PLEKHH2Q8IVE3 1493 aa9.91□□□□□ -0.82
ATG4A-207ENST00000474825 NAIPQ13075 1403 aa9.9□□□□□ -0.82
ATG4A-207ENST00000474825 CDC42BPBQ9Y5S2 1711 aa9.9□□□□□ -0.82
ATG4A-207ENST00000474825 EFCAB2Q5VUJ9 269 aa9.9□□□□□ -0.82
ATG4A-207ENST00000474825 SHANK2Q9UPX8 1470 aa9.9□□□□□ -0.83
ATG4A-207ENST00000474825 RAB3GAP2Q9H2M9 1393 aa9.89□□□□□ -0.83
ATG4A-207ENST00000474825 SAMD9LQ8IVG5 1584 aa9.89□□□□□ -0.83
ATG4A-207ENST00000474825 GLI2P10070 1586 aa9.88□□□□□ -0.83
ATG4A-207ENST00000474825 ACIN1Q9UKV3 1341 aaKnown RBP9.88□□□□□ -0.83
ATG4A-207ENST00000474825 ITGAEP38570 1179 aa9.88□□□□□ -0.83
ATG4A-207ENST00000474825 NCOA1Q15788 1441 aa9.88□□□□□ -0.83
ATG4A-207ENST00000474825 MYO5CQ9NQX4 1742 aa9.87□□□□□ -0.83
ATG4A-207ENST00000474825 ARHGAP5Q13017 1502 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms