RNA–Protein interactions for RNA: ENST00000474430.5

TRIM46-208, Transcript of tripartite motif containing 46, humanhuman

TSL 5

Gene TRIM46, Length 2,704 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-208ENST00000474430 ZNF644Q9H582 1327 aaPredicted RBP23.42■■□□□ 1.34
TRIM46-208ENST00000474430 DNMT1P26358 1616 aaKnown RBP23.41■■□□□ 1.34
TRIM46-208ENST00000474430 DAPK1P53355 1430 aa23.41■■□□□ 1.34
TRIM46-208ENST00000474430 AKNAQ7Z591 1439 aa23.41■■□□□ 1.34
TRIM46-208ENST00000474430 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
TRIM46-208ENST00000474430 NAIPQ13075 1403 aa23.39■■□□□ 1.34
TRIM46-208ENST00000474430 ABCC5O15440 1437 aa23.38■■□□□ 1.33
TRIM46-208ENST00000474430 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
TRIM46-208ENST00000474430 CHIC2Q9UKJ5 165 aa23.37■■□□□ 1.33
TRIM46-208ENST00000474430 ROCK1Q13464 1354 aa23.35■■□□□ 1.33
TRIM46-208ENST00000474430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.34■■□□□ 1.33
TRIM46-208ENST00000474430 PREX2Q70Z35 1606 aa23.33■■□□□ 1.33
TRIM46-208ENST00000474430 GCC2Q8IWJ2 1684 aa23.33■■□□□ 1.33
TRIM46-208ENST00000474430 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
TRIM46-208ENST00000474430 TTC37Q6PGP7 1564 aa23.31■■□□□ 1.32
TRIM46-208ENST00000474430 CENPBP07199 599 aaPredicted RBP23.31■■□□□ 1.32
TRIM46-208ENST00000474430 KCNH8Q96L42 1107 aa23.31■■□□□ 1.32
TRIM46-208ENST00000474430 NEUROD1Q13562 356 aa23.29■■□□□ 1.32
TRIM46-208ENST00000474430 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
TRIM46-208ENST00000474430 WDR7Q9Y4E6 1490 aa23.26■■□□□ 1.31
TRIM46-208ENST00000474430 CROCC2H7BZ55 1655 aa23.26■■□□□ 1.31
TRIM46-208ENST00000474430 MAPKBP1O60336 1514 aa23.26■■□□□ 1.31
TRIM46-208ENST00000474430 PRKCSHP14314 528 aaPredicted RBP23.26■■□□□ 1.31
TRIM46-208ENST00000474430 MYO5CQ9NQX4 1742 aa23.26■■□□□ 1.31
TRIM46-208ENST00000474430 ARHGAP5Q13017 1502 aa23.25■■□□□ 1.31
TRIM46-208ENST00000474430 ADGBQ8N7X0 1667 aa23.23■■□□□ 1.31
TRIM46-208ENST00000474430 ADGRL2O95490 1459 aa23.23■■□□□ 1.31
TRIM46-208ENST00000474430 SHANK2Q9UPX8 1470 aa23.23■■□□□ 1.31
TRIM46-208ENST00000474430 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
TRIM46-208ENST00000474430 SAMD9LQ8IVG5 1584 aa23.23■■□□□ 1.31
TRIM46-208ENST00000474430 NPM1P06748 294 aaKnown RBP eCLIP23.23■■□□□ 1.31
TRIM46-208ENST00000474430 PLCH2O75038 1416 aa23.21■■□□□ 1.31
TRIM46-208ENST00000474430 RSPH4AQ5TD94 716 aa23.2■■□□□ 1.3
TRIM46-208ENST00000474430 NCOA1Q15788 1441 aa23.2■■□□□ 1.3
TRIM46-208ENST00000474430 PLEKHH2Q8IVE3 1493 aa23.2■■□□□ 1.3
TRIM46-208ENST00000474430 ANKRD30AQ9BXX3 1397 aa23.19■■□□□ 1.3
TRIM46-208ENST00000474430 MBD5Q9P267 1494 aa23.19■■□□□ 1.3
TRIM46-208ENST00000474430 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
TRIM46-208ENST00000474430 SLC24A1O60721 1099 aa23.18■■□□□ 1.3
TRIM46-208ENST00000474430 TSPY4P0CV99 314 aa23.18■■□□□ 1.3
TRIM46-208ENST00000474430 TSPY10P0CW01 314 aa23.18■■□□□ 1.3
TRIM46-208ENST00000474430 HNRNPMP52272 730 aaKnown RBP eCLIP23.18■■□□□ 1.3
TRIM46-208ENST00000474430 C9orf84Q5VXU9 1444 aa23.18■■□□□ 1.3
TRIM46-208ENST00000474430 KDM6BO15054 1643 aa23.17■■□□□ 1.3
TRIM46-208ENST00000474430 CCDC141Q6ZP82 1450 aa23.17■■□□□ 1.3
TRIM46-208ENST00000474430 KIAA1107Q9UPP5 1409 aa23.16■■□□□ 1.3
TRIM46-208ENST00000474430 EFCAB2Q5VUJ9 269 aa23.16■■□□□ 1.3
TRIM46-208ENST00000474430 ARAP3Q8WWN8 1544 aa23.15■■□□□ 1.3
TRIM46-208ENST00000474430 SYCP2Q9BX26 1530 aa23.13■■□□□ 1.29
TRIM46-208ENST00000474430 TRIM52Q96A61 297 aa23.13■■□□□ 1.29
TRIM46-208ENST00000474430 MIER1Q8N108 512 aa23.13■■□□□ 1.29
TRIM46-208ENST00000474430 ABCA9Q8IUA7 1624 aa23.12■■□□□ 1.29
TRIM46-208ENST00000474430 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.28
TRIM46-208ENST00000474430 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.28
TRIM46-208ENST00000474430 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.28
TRIM46-208ENST00000474430 MAST1Q9Y2H9 1570 aa23.07■■□□□ 1.28
TRIM46-208ENST00000474430 ANKRD50Q9ULJ7 1429 aa23.06■■□□□ 1.28
TRIM46-208ENST00000474430 ABCC1P33527 1531 aa23.06■■□□□ 1.28
TRIM46-208ENST00000474430 SIN3AQ96ST3 1273 aa23.04■■□□□ 1.28
TRIM46-208ENST00000474430 TIMELESSQ9UNS1 1208 aa23.04■■□□□ 1.28
TRIM46-208ENST00000474430 KIF15Q9NS87 1388 aa23.04■■□□□ 1.28
TRIM46-208ENST00000474430 ARHGEF12Q9NZN5 1544 aa23.04■■□□□ 1.28
TRIM46-208ENST00000474430 MPHOSPH9Q99550 1183 aa23.03■■□□□ 1.28
TRIM46-208ENST00000474430 CYB5RLQ6IPT4 315 aa23.02■■□□□ 1.28
TRIM46-208ENST00000474430 GTF3C3Q9Y5Q9 886 aa23.02■■□□□ 1.28
TRIM46-208ENST00000474430 FANCAO15360 1455 aa23.01■■□□□ 1.27
TRIM46-208ENST00000474430 DENND4BO75064 1496 aaPredicted RBP22.99■■□□□ 1.27
TRIM46-208ENST00000474430 PLXNC1O60486 1568 aa22.97■■□□□ 1.27
TRIM46-208ENST00000474430 TRAPPC8Q9Y2L5 1435 aa22.96■■□□□ 1.27
TRIM46-208ENST00000474430 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
TRIM46-208ENST00000474430 PZPP20742 1482 aa22.94■■□□□ 1.26
TRIM46-208ENST00000474430 CD109Q6YHK3 1445 aa22.93■■□□□ 1.26
TRIM46-208ENST00000474430 ADGRL1O94910 1474 aa22.92■■□□□ 1.26
TRIM46-208ENST00000474430 RTEL1-TNFRSF6BF6WH68 1400 aa22.91■■□□□ 1.26
TRIM46-208ENST00000474430 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
TRIM46-208ENST00000474430 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
TRIM46-208ENST00000474430 CFAP74Q9C0B2 1584 aa22.9■■□□□ 1.26
TRIM46-208ENST00000474430 KDM5DQ9BY66 1539 aa22.89■■□□□ 1.26
TRIM46-208ENST00000474430 DUOX2Q9NRD8 1548 aa22.89■■□□□ 1.26
TRIM46-208ENST00000474430 SCAPERQ9BY12 1400 aa22.89■■□□□ 1.26
TRIM46-208ENST00000474430 NUP155O75694 1391 aa22.88■■□□□ 1.25
TRIM46-208ENST00000474430 AFAP1Q8N556 730 aa22.87■■□□□ 1.25
TRIM46-208ENST00000474430 ANKRD30BQ9BXX2 1392 aa22.87■■□□□ 1.25
TRIM46-208ENST00000474430 FOXD1Q16676 465 aa22.86■■□□□ 1.25
TRIM46-208ENST00000474430 YTHDC1Q96MU7 727 aaKnown RBP22.86■■□□□ 1.25
TRIM46-208ENST00000474430 ERBINQ96RT1 1412 aa22.85■■□□□ 1.25
TRIM46-208ENST00000474430 ZFYVE16Q7Z3T8 1539 aa22.85■■□□□ 1.25
TRIM46-208ENST00000474430 PPP1R15AO75807 674 aaPredicted RBP22.83■■□□□ 1.24
TRIM46-208ENST00000474430 PKD2Q13563 968 aa22.81■■□□□ 1.24
TRIM46-208ENST00000474430 GLI2P10070 1586 aa22.81■■□□□ 1.24
TRIM46-208ENST00000474430 ATP7AQ04656 1500 aa22.81■■□□□ 1.24
TRIM46-208ENST00000474430 UNC13BO14795 1591 aa22.81■■□□□ 1.24
TRIM46-208ENST00000474430 INO80Q9ULG1 1556 aaPredicted RBP22.81■■□□□ 1.24
TRIM46-208ENST00000474430 NEO1Q92859 1461 aa22.79■■□□□ 1.24
TRIM46-208ENST00000474430 ZNF518AQ6AHZ1 1483 aa22.79■■□□□ 1.24
TRIM46-208ENST00000474430 MAP3K4Q9Y6R4 1608 aa22.78■■□□□ 1.24
TRIM46-208ENST00000474430 RPRD2Q5VT52 1461 aaKnown RBP22.77■■□□□ 1.24
TRIM46-208ENST00000474430 FAM135AQ9P2D6 1515 aa22.76■■□□□ 1.23
TRIM46-208ENST00000474430 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
TRIM46-208ENST00000474430 POGZQ7Z3K3 1410 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms