RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 PLB1Q6P1J6 1458 aa20.1■□□□□ 0.81
SAMM50-203ENST00000474323 PRG4Q92954 1404 aaPredicted RBP20.1■□□□□ 0.81
SAMM50-203ENST00000474323 NCOA2Q15596 1464 aa20.09■□□□□ 0.81
SAMM50-203ENST00000474323 SUPT6HQ7KZ85 1726 aaKnown RBP20.09■□□□□ 0.81
SAMM50-203ENST00000474323 PPP4R2Q9NY27 417 aa20.08■□□□□ 0.81
SAMM50-203ENST00000474323 HNRNPUQ00839 825 aaKnown RBP eCLIP20.05■□□□□ 0.8
SAMM50-203ENST00000474323 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
SAMM50-203ENST00000474323 EIF5BO60841 1220 aaKnown RBP20.04■□□□□ 0.8
SAMM50-203ENST00000474323 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
SAMM50-203ENST00000474323 IRX6P78412 446 aaPredicted RBP20.02■□□□□ 0.8
SAMM50-203ENST00000474323 MYOM3Q5VTT5 1437 aa20.01■□□□□ 0.79
SAMM50-203ENST00000474323 SHROOM2Q13796 1616 aa20■□□□□ 0.79
SAMM50-203ENST00000474323 ARHGEF11O15085 1522 aa20■□□□□ 0.79
SAMM50-203ENST00000474323 NOP58Q9Y2X3 529 aaKnown RBP19.99■□□□□ 0.79
SAMM50-203ENST00000474323 PTPRGP23470 1445 aa19.98■□□□□ 0.79
SAMM50-203ENST00000474323 ABCA8O94911 1581 aa19.97■□□□□ 0.79
SAMM50-203ENST00000474323 ERCC6L2Q5T890 1561 aa19.96■□□□□ 0.79
SAMM50-203ENST00000474323 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.95■□□□□ 0.78
SAMM50-203ENST00000474323 CLASP1Q7Z460 1538 aa19.95■□□□□ 0.78
SAMM50-203ENST00000474323 PTPN23Q9H3S7 1636 aa19.92■□□□□ 0.78
SAMM50-203ENST00000474323 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
SAMM50-203ENST00000474323 TROQ12816 1431 aaPredicted RBP19.9■□□□□ 0.78
SAMM50-203ENST00000474323 ATP10BO94823 1461 aa19.89■□□□□ 0.77
SAMM50-203ENST00000474323 NBR1Q14596 966 aa19.87■□□□□ 0.77
SAMM50-203ENST00000474323 ANO8Q9HCE9 1232 aaPredicted RBP19.87■□□□□ 0.77
SAMM50-203ENST00000474323 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
SAMM50-203ENST00000474323 B4GALNT3Q6L9W6 998 aa19.85■□□□□ 0.77
SAMM50-203ENST00000474323 KIF14Q15058 1648 aa19.85■□□□□ 0.77
SAMM50-203ENST00000474323 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
SAMM50-203ENST00000474323 PLEKHD1A6NEE1 506 aa19.85■□□□□ 0.77
SAMM50-203ENST00000474323 PAK3O75914 559 aaPredicted RBP19.85■□□□□ 0.77
SAMM50-203ENST00000474323 MIA2Q96PC5 1412 aa19.84■□□□□ 0.77
SAMM50-203ENST00000474323 TCOF1Q13428 1488 aaKnown RBP19.83■□□□□ 0.77
SAMM50-203ENST00000474323 ADCY10Q96PN6 1610 aa19.81■□□□□ 0.76
SAMM50-203ENST00000474323 ARXQ96QS3 562 aa19.8■□□□□ 0.76
SAMM50-203ENST00000474323 RTL5Q5HYW3 569 aaPredicted RBP19.8■□□□□ 0.76
SAMM50-203ENST00000474323 IPO9Q96P70 1041 aaKnown RBP19.79■□□□□ 0.76
SAMM50-203ENST00000474323 ZNF644Q9H582 1327 aaPredicted RBP19.79■□□□□ 0.76
SAMM50-203ENST00000474323 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
SAMM50-203ENST00000474323 ZBED9Q6R2W3 1325 aa19.77■□□□□ 0.76
SAMM50-203ENST00000474323 ABCC2Q92887 1545 aa19.77■□□□□ 0.75
SAMM50-203ENST00000474323 ANP32AP39687 249 aaKnown RBP19.77■□□□□ 0.75
SAMM50-203ENST00000474323 GPATCH8Q9UKJ3 1502 aaKnown RBP19.76■□□□□ 0.75
SAMM50-203ENST00000474323 CFDP1Q9UEE9 299 aaPredicted RBP19.76■□□□□ 0.75
SAMM50-203ENST00000474323 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
SAMM50-203ENST00000474323 OSCARQ8IYS5 282 aa19.75■□□□□ 0.75
SAMM50-203ENST00000474323 WASHC2AQ641Q2 1341 aa19.74■□□□□ 0.75
SAMM50-203ENST00000474323 HFM1A2PYH4 1435 aa19.74■□□□□ 0.75
SAMM50-203ENST00000474323 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
SAMM50-203ENST00000474323 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
SAMM50-203ENST00000474323 ZBTB47Q9UFB7 747 aaPredicted RBP19.72■□□□□ 0.75
SAMM50-203ENST00000474323 SALL2Q9Y467 1007 aaPredicted RBP19.72■□□□□ 0.75
SAMM50-203ENST00000474323 NAIPQ13075 1403 aa19.71■□□□□ 0.75
SAMM50-203ENST00000474323 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
SAMM50-203ENST00000474323 CDC42BPAQ5VT25 1732 aa19.7■□□□□ 0.74
SAMM50-203ENST00000474323 CAMSAP2Q08AD1 1489 aa19.7■□□□□ 0.74
SAMM50-203ENST00000474323 CNTLNQ9NXG0 1405 aa19.69■□□□□ 0.74
SAMM50-203ENST00000474323 KDM5BQ9UGL1 1544 aa19.69■□□□□ 0.74
SAMM50-203ENST00000474323 DAPK1P53355 1430 aa19.68■□□□□ 0.74
SAMM50-203ENST00000474323 CCDC184Q52MB2 194 aa19.68■□□□□ 0.74
SAMM50-203ENST00000474323 DNMT1P26358 1616 aaKnown RBP19.67■□□□□ 0.74
SAMM50-203ENST00000474323 ABCC5O15440 1437 aa19.66■□□□□ 0.74
SAMM50-203ENST00000474323 HSPA5P11021 654 aaKnown RBP19.66■□□□□ 0.74
SAMM50-203ENST00000474323 ZCCHC11Q5TAX3 1644 aaKnown RBP19.66■□□□□ 0.74
SAMM50-203ENST00000474323 PRKRIP1Q9H875 184 aaPredicted RBP19.66■□□□□ 0.74
SAMM50-203ENST00000474323 UHRF1BP1LA0JNW5 1464 aa19.66■□□□□ 0.74
SAMM50-203ENST00000474323 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
SAMM50-203ENST00000474323 MRS2Q9HD23 443 aa19.63■□□□□ 0.73
SAMM50-203ENST00000474323 GCC2Q8IWJ2 1684 aa19.63■□□□□ 0.73
SAMM50-203ENST00000474323 EIF4G2P78344 907 aaKnown RBP eCLIP19.63■□□□□ 0.73
SAMM50-203ENST00000474323 IL27Q8NEV9 243 aa19.62■□□□□ 0.73
SAMM50-203ENST00000474323 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
SAMM50-203ENST00000474323 CCDC136Q96JN2 1154 aa19.61■□□□□ 0.73
SAMM50-203ENST00000474323 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
SAMM50-203ENST00000474323 RNF123Q5XPI4 1314 aa19.6■□□□□ 0.73
SAMM50-203ENST00000474323 TTC37Q6PGP7 1564 aa19.6■□□□□ 0.73
SAMM50-203ENST00000474323 AKNAQ7Z591 1439 aa19.6■□□□□ 0.73
SAMM50-203ENST00000474323 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
SAMM50-203ENST00000474323 KDM6BO15054 1643 aa19.6■□□□□ 0.73
SAMM50-203ENST00000474323 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.59■□□□□ 0.73
SAMM50-203ENST00000474323 CDC42BPBQ9Y5S2 1711 aa19.59■□□□□ 0.73
SAMM50-203ENST00000474323 PREX2Q70Z35 1606 aa19.57■□□□□ 0.72
SAMM50-203ENST00000474323 ROCK1Q13464 1354 aa19.57■□□□□ 0.72
SAMM50-203ENST00000474323 NCOA1Q15788 1441 aa19.55■□□□□ 0.72
SAMM50-203ENST00000474323 C11orf95C9JLR9 678 aaPredicted RBP19.55■□□□□ 0.72
SAMM50-203ENST00000474323 CROCC2H7BZ55 1655 aa19.55■□□□□ 0.72
SAMM50-203ENST00000474323 CCDC7Q96M83 1385 aa19.54■□□□□ 0.72
SAMM50-203ENST00000474323 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■■■□ 25.4
SAMM50-203ENST00000474323 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
SAMM50-203ENST00000474323 NUDCQ9Y266 331 aa19.53■□□□□ 0.72
SAMM50-203ENST00000474323 ARHGAP5Q13017 1502 aa19.53■□□□□ 0.72
SAMM50-203ENST00000474323 SAMD9LQ8IVG5 1584 aa19.53■□□□□ 0.72
SAMM50-203ENST00000474323 MYO5CQ9NQX4 1742 aa19.52■□□□□ 0.72
SAMM50-203ENST00000474323 ADGBQ8N7X0 1667 aa19.52■□□□□ 0.72
SAMM50-203ENST00000474323 WASHC2CQ9Y4E1 1318 aa19.51■□□□□ 0.71
SAMM50-203ENST00000474323 UBE2Q2Q8WVN8 375 aa19.49■□□□□ 0.71
SAMM50-203ENST00000474323 C9orf84Q5VXU9 1444 aa19.47■□□□□ 0.71
SAMM50-203ENST00000474323 ADGRL2O95490 1459 aa19.47■□□□□ 0.71
SAMM50-203ENST00000474323 MBD5Q9P267 1494 aa19.47■□□□□ 0.71
SAMM50-203ENST00000474323 NEFMP07197 916 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms