RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 ZMYM4Q5VZL5 1548 aa21.02■□□□□ 0.96
SHROOM3-204ENST00000473602 SCAPERQ9BY12 1400 aa21.02■□□□□ 0.96
SHROOM3-204ENST00000473602 CDK13Q14004 1512 aaKnown RBP21.01■□□□□ 0.95
SHROOM3-204ENST00000473602 TTC37Q6PGP7 1564 aa21.01■□□□□ 0.95
SHROOM3-204ENST00000473602 CFAP74Q9C0B2 1584 aa21.01■□□□□ 0.95
SHROOM3-204ENST00000473602 PLCH2O75038 1416 aa21■□□□□ 0.95
SHROOM3-204ENST00000473602 CLIP1P30622 1438 aa21■□□□□ 0.95
SHROOM3-204ENST00000473602 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
SHROOM3-204ENST00000473602 EFCAB2Q5VUJ9 269 aa20.97■□□□□ 0.95
SHROOM3-204ENST00000473602 SIGLEC1Q9BZZ2 1709 aa20.97■□□□□ 0.95
SHROOM3-204ENST00000473602 LRRIQ1Q96JM4 1722 aa20.96■□□□□ 0.95
SHROOM3-204ENST00000473602 CEBPAP49715 358 aaPredicted RBP20.96■□□□□ 0.95
SHROOM3-204ENST00000473602 CASKIN1Q8WXD9 1431 aa20.95■□□□□ 0.94
SHROOM3-204ENST00000473602 ATP10AO60312 1499 aa20.94■□□□□ 0.94
SHROOM3-204ENST00000473602 CDK11AQ9UQ88 783 aaPredicted RBP20.92■□□□□ 0.94
SHROOM3-204ENST00000473602 CCDC18Q5T9S5 1454 aa20.92■□□□□ 0.94
SHROOM3-204ENST00000473602 FYCO1Q9BQS8 1478 aa20.92■□□□□ 0.94
SHROOM3-204ENST00000473602 C9orf84Q5VXU9 1444 aa20.9■□□□□ 0.94
SHROOM3-204ENST00000473602 AFAP1Q8N556 730 aa20.9■□□□□ 0.94
SHROOM3-204ENST00000473602 ARHGEF12Q9NZN5 1544 aa20.89■□□□□ 0.94
SHROOM3-204ENST00000473602 MYT1LQ9UL68 1186 aa20.88■□□□□ 0.93
SHROOM3-204ENST00000473602 KIF14Q15058 1648 aa20.87■□□□□ 0.93
SHROOM3-204ENST00000473602 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
SHROOM3-204ENST00000473602 TROQ12816 1431 aaPredicted RBP20.87■□□□□ 0.93
SHROOM3-204ENST00000473602 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
SHROOM3-204ENST00000473602 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
SHROOM3-204ENST00000473602 MYO5CQ9NQX4 1742 aa20.84■□□□□ 0.93
SHROOM3-204ENST00000473602 ZNF518AQ6AHZ1 1483 aa20.81■□□□□ 0.92
SHROOM3-204ENST00000473602 UHRF1BP1Q6BDS2 1440 aa20.78■□□□□ 0.92
SHROOM3-204ENST00000473602 DISP3Q9P2K9 1392 aa20.78■□□□□ 0.92
SHROOM3-204ENST00000473602 ARHGAP5Q13017 1502 aa20.78■□□□□ 0.92
SHROOM3-204ENST00000473602 ILDR2Q71H61 639 aa20.77■□□□□ 0.92
SHROOM3-204ENST00000473602 PREX1Q8TCU6 1659 aa20.77■□□□□ 0.91
SHROOM3-204ENST00000473602 ESF1Q9H501 851 aaKnown RBP20.75■□□□□ 0.91
SHROOM3-204ENST00000473602 KDM5CP41229 1560 aa20.73■□□□□ 0.91
SHROOM3-204ENST00000473602 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
SHROOM3-204ENST00000473602 STRCQ7RTU9 1775 aa20.72■□□□□ 0.91
SHROOM3-204ENST00000473602 PREX2Q70Z35 1606 aa20.71■□□□□ 0.91
SHROOM3-204ENST00000473602 MLH3Q9UHC1 1453 aa20.71■□□□□ 0.91
SHROOM3-204ENST00000473602 TRAPPC8Q9Y2L5 1435 aa20.7■□□□□ 0.9
SHROOM3-204ENST00000473602 SETD1BQ9UPS6 1966 aaKnown RBP20.7■□□□□ 0.9
SHROOM3-204ENST00000473602 DIP2CQ9Y2E4 1556 aa20.7■□□□□ 0.9
SHROOM3-204ENST00000473602 CDC42BPBQ9Y5S2 1711 aa20.7■□□□□ 0.9
SHROOM3-204ENST00000473602 PTPRTO14522 1441 aa20.7■□□□□ 0.9
SHROOM3-204ENST00000473602 SOCS7O14512 581 aa20.68■□□□□ 0.9
SHROOM3-204ENST00000473602 CDC42BPAQ5VT25 1732 aa20.67■□□□□ 0.9
SHROOM3-204ENST00000473602 REREQ9P2R6 1566 aa20.67■□□□□ 0.9
SHROOM3-204ENST00000473602 VPS8Q8N3P4 1428 aa20.65■□□□□ 0.9
SHROOM3-204ENST00000473602 ABCA6Q8N139 1617 aa20.64■□□□□ 0.9
SHROOM3-204ENST00000473602 AGLP35573 1532 aa20.64■□□□□ 0.9
SHROOM3-204ENST00000473602 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.9
SHROOM3-204ENST00000473602 MTUS2Q5JR59 1369 aa20.63■□□□□ 0.89
SHROOM3-204ENST00000473602 C3P01024 1663 aa20.61■□□□□ 0.89
SHROOM3-204ENST00000473602 ZNF777Q9ULD5 760 aaPredicted RBP20.61■□□□□ 0.89
SHROOM3-204ENST00000473602 ABCC1P33527 1531 aa20.61■□□□□ 0.89
SHROOM3-204ENST00000473602 CNTLNQ9NXG0 1405 aa20.61■□□□□ 0.89
SHROOM3-204ENST00000473602 NCOA1Q15788 1441 aa20.6■□□□□ 0.89
SHROOM3-204ENST00000473602 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
SHROOM3-204ENST00000473602 LTBP4Q8N2S1 1624 aa20.58■□□□□ 0.89
SHROOM3-204ENST00000473602 ZMYM3Q14202 1370 aa20.58■□□□□ 0.88
SHROOM3-204ENST00000473602 GPATCH8Q9UKJ3 1502 aaKnown RBP20.58■□□□□ 0.88
SHROOM3-204ENST00000473602 ITSN2Q9NZM3 1697 aa20.58■□□□□ 0.88
SHROOM3-204ENST00000473602 NCKAP5LQ9HCH0 1330 aa20.56■□□□□ 0.88
SHROOM3-204ENST00000473602 HNRNPMP52272 730 aaKnown RBP eCLIP20.56■□□□□ 0.88
SHROOM3-204ENST00000473602 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
SHROOM3-204ENST00000473602 SPAG9O60271 1321 aaKnown RBP20.55■□□□□ 0.88
SHROOM3-204ENST00000473602 SUPT6HQ7KZ85 1726 aaKnown RBP20.55■□□□□ 0.88
SHROOM3-204ENST00000473602 MAP3K1Q13233 1512 aa20.54■□□□□ 0.88
SHROOM3-204ENST00000473602 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
SHROOM3-204ENST00000473602 KIDINS220Q9ULH0 1771 aa20.54■□□□□ 0.88
SHROOM3-204ENST00000473602 NPATQ14207 1427 aa20.53■□□□□ 0.88
SHROOM3-204ENST00000473602 SAMD9LQ8IVG5 1584 aa20.53■□□□□ 0.88
SHROOM3-204ENST00000473602 IQSEC2Q5JU85 1478 aa20.51■□□□□ 0.87
SHROOM3-204ENST00000473602 ZNF335Q9H4Z2 1342 aaPredicted RBP20.51■□□□□ 0.87
SHROOM3-204ENST00000473602 PLEKHH2Q8IVE3 1493 aa20.5■□□□□ 0.87
SHROOM3-204ENST00000473602 CAMSAP1Q5T5Y3 1602 aa20.5■□□□□ 0.87
SHROOM3-204ENST00000473602 SPATA31D1Q6ZQQ2 1576 aa20.5■□□□□ 0.87
SHROOM3-204ENST00000473602 UBAP1LF5GYI3 381 aa20.49■□□□□ 0.87
SHROOM3-204ENST00000473602 GGT6Q6P531 493 aa20.48■□□□□ 0.87
SHROOM3-204ENST00000473602 CFDP1Q9UEE9 299 aaPredicted RBP20.48■□□□□ 0.87
SHROOM3-204ENST00000473602 KIAA1107Q9UPP5 1409 aa20.47■□□□□ 0.87
SHROOM3-204ENST00000473602 PKD2Q13563 968 aa20.47■□□□□ 0.87
SHROOM3-204ENST00000473602 NCOA2Q15596 1464 aa20.47■□□□□ 0.87
SHROOM3-204ENST00000473602 LRRC9Q6ZRR7 1453 aa20.47■□□□□ 0.87
SHROOM3-204ENST00000473602 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
SHROOM3-204ENST00000473602 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
SHROOM3-204ENST00000473602 A2MP01023 1474 aa20.43■□□□□ 0.86
SHROOM3-204ENST00000473602 MROH2AA6NES4 1674 aa20.42■□□□□ 0.86
SHROOM3-204ENST00000473602 ATP7AQ04656 1500 aa20.4■□□□□ 0.86
SHROOM3-204ENST00000473602 PLA2R1Q13018 1463 aa20.4■□□□□ 0.86
SHROOM3-204ENST00000473602 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
SHROOM3-204ENST00000473602 ZNF644Q9H582 1327 aaPredicted RBP20.38■□□□□ 0.85
SHROOM3-204ENST00000473602 INO80Q9ULG1 1556 aaPredicted RBP20.38■□□□□ 0.85
SHROOM3-204ENST00000473602 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
SHROOM3-204ENST00000473602 APLP2Q06481 763 aa20.37■□□□□ 0.85
SHROOM3-204ENST00000473602 CLTCQ00610 1675 aaKnown RBP20.37■□□□□ 0.85
SHROOM3-204ENST00000473602 PLXNC1O60486 1568 aa20.36■□□□□ 0.85
SHROOM3-204ENST00000473602 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
SHROOM3-204ENST00000473602 MBD5Q9P267 1494 aa20.35■□□□□ 0.85
SHROOM3-204ENST00000473602 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms