RNA–Protein interactions for RNA: ENST00000473485.5

ATP6V0B-208, Transcript of ATPase H+ transporting V0 subunit b, human

TSL 2

Gene ATP6V0B, Length 1,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0B-208	ENST00000473485	OSCAR	Q8IYS5	282 aa		32.99	■■■□□ 2.87
ATP6V0B-208	ENST00000473485	ABCC5	O15440	1437 aa		32.98	■■■□□ 2.87
ATP6V0B-208	ENST00000473485	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.97	■■■□□ 2.87
ATP6V0B-208	ENST00000473485	PREX2	Q70Z35	1606 aa		32.94	■■■□□ 2.86
ATP6V0B-208	ENST00000473485	CROCC2	H7BZ55	1655 aa		32.93	■■■□□ 2.86
ATP6V0B-208	ENST00000473485	ZNF644	Q9H582	1327 aa	Predicted RBP	32.91	■■■□□ 2.86
ATP6V0B-208	ENST00000473485	ADGB	Q8N7X0	1667 aa		32.87	■■■□□ 2.85
ATP6V0B-208	ENST00000473485	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.86	■■■□□ 2.85	5e-8	■■■□□ 18.4
ATP6V0B-208	ENST00000473485	ADGRL2	O95490	1459 aa		32.85	■■■□□ 2.85
ATP6V0B-208	ENST00000473485	CDC42BPB	Q9Y5S2	1711 aa		32.85	■■■□□ 2.85
ATP6V0B-208	ENST00000473485	ACIN1	Q9UKV3	1341 aa	Known RBP	32.85	■■■□□ 2.85
ATP6V0B-208	ENST00000473485	TTC37	Q6PGP7	1564 aa		32.85	■■■□□ 2.85
ATP6V0B-208	ENST00000473485	SHANK2	Q9UPX8	1470 aa		32.84	■■■□□ 2.85
ATP6V0B-208	ENST00000473485	ARHGEF5	Q12774	1597 aa		32.83	■■■□□ 2.85
ATP6V0B-208	ENST00000473485	CHIC2	Q9UKJ5	165 aa		32.8	■■■□□ 2.84
ATP6V0B-208	ENST00000473485	MYO5C	Q9NQX4	1742 aa		32.79	■■■□□ 2.84
ATP6V0B-208	ENST00000473485	RRP7BP	Q9NSQ0	103 aa		32.78	■■■□□ 2.84
ATP6V0B-208	ENST00000473485	SAMD9L	Q8IVG5	1584 aa		32.77	■■■□□ 2.84
ATP6V0B-208	ENST00000473485	KDM6B	O15054	1643 aa		32.76	■■■□□ 2.83
ATP6V0B-208	ENST00000473485	NCOA1	Q15788	1441 aa		32.73	■■■□□ 2.83
ATP6V0B-208	ENST00000473485	MBD5	Q9P267	1494 aa		32.72	■■■□□ 2.83
ATP6V0B-208	ENST00000473485	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.72	■■■□□ 2.83
ATP6V0B-208	ENST00000473485	ARAP3	Q8WWN8	1544 aa		32.69	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	WDR7	Q9Y4E6	1490 aa		32.69	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	PLEKHH2	Q8IVE3	1493 aa		32.68	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	ARHGAP5	Q13017	1502 aa		32.68	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	ANKRD30A	Q9BXX3	1397 aa		32.66	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	PLCH2	O75038	1416 aa		32.66	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	CCDC141	Q6ZP82	1450 aa		32.66	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	C9orf84	Q5VXU9	1444 aa		32.65	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	RSPH4A	Q5TD94	716 aa		32.65	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	KIAA1107	Q9UPP5	1409 aa		32.64	■■■□□ 2.82
ATP6V0B-208	ENST00000473485	TIMELESS	Q9UNS1	1208 aa		32.63	■■■□□ 2.81
ATP6V0B-208	ENST00000473485	MAST1	Q9Y2H9	1570 aa		32.62	■■■□□ 2.81
ATP6V0B-208	ENST00000473485	ABCA9	Q8IUA7	1624 aa		32.58	■■■□□ 2.81
ATP6V0B-208	ENST00000473485	SYCP2	Q9BX26	1530 aa		32.58	■■■□□ 2.81
ATP6V0B-208	ENST00000473485	DENND4B	O75064	1496 aa	Predicted RBP	32.58	■■■□□ 2.81
ATP6V0B-208	ENST00000473485	KCNH8	Q96L42	1107 aa		32.56	■■■□□ 2.8
ATP6V0B-208	ENST00000473485	ASXL2	Q76L83	1435 aa		32.53	■■■□□ 2.8
ATP6V0B-208	ENST00000473485	TSPY4	P0CV99	314 aa		32.53	■■■□□ 2.8
ATP6V0B-208	ENST00000473485	TSPY10	P0CW01	314 aa		32.53	■■■□□ 2.8
ATP6V0B-208	ENST00000473485	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.52	■■■□□ 2.8
ATP6V0B-208	ENST00000473485	ABCC1	P33527	1531 aa		32.51	■■■□□ 2.8
ATP6V0B-208	ENST00000473485	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.51	■■■□□ 2.79	1e-7	■□□□□ 9
ATP6V0B-208	ENST00000473485	ANKRD50	Q9ULJ7	1429 aa		32.49	■■■□□ 2.79
ATP6V0B-208	ENST00000473485	EFCAB2	Q5VUJ9	269 aa		32.49	■■■□□ 2.79
ATP6V0B-208	ENST00000473485	SIN3A	Q96ST3	1273 aa		32.48	■■■□□ 2.79
ATP6V0B-208	ENST00000473485	TRIM52	Q96A61	297 aa		32.47	■■■□□ 2.79
ATP6V0B-208	ENST00000473485	PLXNC1	O60486	1568 aa		32.47	■■■□□ 2.79
ATP6V0B-208	ENST00000473485	MPHOSPH9	Q99550	1183 aa		32.45	■■■□□ 2.79
ATP6V0B-208	ENST00000473485	ARHGEF12	Q9NZN5	1544 aa		32.44	■■■□□ 2.78
ATP6V0B-208	ENST00000473485	KIF15	Q9NS87	1388 aa		32.43	■■■□□ 2.78
ATP6V0B-208	ENST00000473485	PZP	P20742	1482 aa		32.43	■■■□□ 2.78
ATP6V0B-208	ENST00000473485	KDM5D	Q9BY66	1539 aa		32.43	■■■□□ 2.78
ATP6V0B-208	ENST00000473485	NPM1	P06748	294 aa	Known RBP eCLIP	32.4	■■■□□ 2.78
ATP6V0B-208	ENST00000473485	NEUROD1	Q13562	356 aa		32.37	■■■□□ 2.77
ATP6V0B-208	ENST00000473485	FANCA	O15360	1455 aa		32.33	■■■□□ 2.77
ATP6V0B-208	ENST00000473485	TONSL	Q96HA7	1378 aa		32.32	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	ANKRD30B	Q9BXX2	1392 aa		32.32	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	RIMBP3C	A6NJZ7	1639 aa		32.31	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	RIMBP3B	A6NNM3	1639 aa		32.31	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	RIMBP3	Q9UFD9	1639 aa		32.31	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.29	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	DUOX2	Q9NRD8	1548 aa		32.29	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	TRAPPC8	Q9Y2L5	1435 aa		32.28	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.28	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	PPP1R15A	O75807	674 aa	Predicted RBP	32.27	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	UNC13B	O14795	1591 aa		32.26	■■■□□ 2.76
ATP6V0B-208	ENST00000473485	CFAP74	Q9C0B2	1584 aa		32.25	■■■□□ 2.75
ATP6V0B-208	ENST00000473485	RPRD2	Q5VT52	1461 aa	Known RBP	32.23	■■■□□ 2.75
ATP6V0B-208	ENST00000473485	ERBIN	Q96RT1	1412 aa		32.23	■■■□□ 2.75
ATP6V0B-208	ENST00000473485	ZFYVE16	Q7Z3T8	1539 aa		32.23	■■■□□ 2.75
ATP6V0B-208	ENST00000473485	DIEXF	Q68CQ4	756 aa	Known RBP	32.22	■■■□□ 2.75
ATP6V0B-208	ENST00000473485	INO80	Q9ULG1	1556 aa	Predicted RBP	32.2	■■■□□ 2.74
ATP6V0B-208	ENST00000473485	ADGRL1	O94910	1474 aa		32.2	■■■□□ 2.74
ATP6V0B-208	ENST00000473485	NUP155	O75694	1391 aa		32.19	■■■□□ 2.74
ATP6V0B-208	ENST00000473485	MAGI2	Q86UL8	1455 aa		32.17	■■■□□ 2.74
ATP6V0B-208	ENST00000473485	CD109	Q6YHK3	1445 aa		32.15	■■■□□ 2.74
ATP6V0B-208	ENST00000473485	FAM135A	Q9P2D6	1515 aa		32.13	■■■□□ 2.73
ATP6V0B-208	ENST00000473485	SPAG9	O60271	1321 aa	Known RBP	32.13	■■■□□ 2.73
ATP6V0B-208	ENST00000473485	SCAPER	Q9BY12	1400 aa		32.13	■■■□□ 2.73
ATP6V0B-208	ENST00000473485	FOXD1	Q16676	465 aa		32.12	■■■□□ 2.73
ATP6V0B-208	ENST00000473485	IQGAP3	Q86VI3	1631 aa		32.12	■■■□□ 2.73
ATP6V0B-208	ENST00000473485	ATP7A	Q04656	1500 aa		32.12	■■■□□ 2.73
ATP6V0B-208	ENST00000473485	GLI2	P10070	1586 aa		32.1	■■■□□ 2.73
ATP6V0B-208	ENST00000473485	TEX14	Q8IWB6	1497 aa		32.1	■■■□□ 2.73
ATP6V0B-208	ENST00000473485	PKD2	Q13563	968 aa		32.09	■■■□□ 2.73
ATP6V0B-208	ENST00000473485	ZNF518A	Q6AHZ1	1483 aa		32.06	■■■□□ 2.72
ATP6V0B-208	ENST00000473485	NEO1	Q92859	1461 aa		32.06	■■■□□ 2.72
ATP6V0B-208	ENST00000473485	AFAP1	Q8N556	730 aa		32.05	■■■□□ 2.72
ATP6V0B-208	ENST00000473485	MAP3K4	Q9Y6R4	1608 aa		32.05	■■■□□ 2.72
ATP6V0B-208	ENST00000473485	CYB5RL	Q6IPT4	315 aa		32.05	■■■□□ 2.72
ATP6V0B-208	ENST00000473485	KDM5C	P41229	1560 aa		32.03	■■■□□ 2.72
ATP6V0B-208	ENST00000473485	DEPDC5	O75140	1603 aa		32.01	■■■□□ 2.71
ATP6V0B-208	ENST00000473485	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.01	■■■□□ 2.71
ATP6V0B-208	ENST00000473485	POGZ	Q7Z3K3	1410 aa		32	■■■□□ 2.71
ATP6V0B-208	ENST00000473485	KIDINS220	Q9ULH0	1771 aa		31.98	■■■□□ 2.71
ATP6V0B-208	ENST00000473485	L3MBTL2	Q969R5	705 aa		31.96	■■■□□ 2.71
ATP6V0B-208	ENST00000473485	MLH3	Q9UHC1	1453 aa		31.93	■■■□□ 2.7
ATP6V0B-208	ENST00000473485	DIP2B	Q9P265	1576 aa		31.91	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms