RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 UACAQ9BZF9 1416 aa18.92■□□□□ 0.62
SCAMP4-207ENST00000472442 GPATCH8Q9UKJ3 1502 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-207ENST00000472442 ERCC6L2Q5T890 1561 aa18.9■□□□□ 0.62
SCAMP4-207ENST00000472442 AKNAQ7Z591 1439 aa18.9■□□□□ 0.62
SCAMP4-207ENST00000472442 GCC2Q8IWJ2 1684 aa18.9■□□□□ 0.62
SCAMP4-207ENST00000472442 DAPK1P53355 1430 aa18.89■□□□□ 0.62
SCAMP4-207ENST00000472442 ABCC5O15440 1437 aa18.89■□□□□ 0.61
SCAMP4-207ENST00000472442 DNMT1P26358 1616 aaKnown RBP18.88■□□□□ 0.61
SCAMP4-207ENST00000472442 PLEKHD1A6NEE1 506 aa18.88■□□□□ 0.61
SCAMP4-207ENST00000472442 KDM6BO15054 1643 aa18.88■□□□□ 0.61
SCAMP4-207ENST00000472442 CFDP1Q9UEE9 299 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-207ENST00000472442 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
SCAMP4-207ENST00000472442 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
SCAMP4-207ENST00000472442 CAMSAP2Q08AD1 1489 aa18.85■□□□□ 0.61
SCAMP4-207ENST00000472442 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
SCAMP4-207ENST00000472442 ROCK1Q13464 1354 aa18.83■□□□□ 0.6
SCAMP4-207ENST00000472442 CDC42BPAQ5VT25 1732 aa18.81■□□□□ 0.6
SCAMP4-207ENST00000472442 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
SCAMP4-207ENST00000472442 DENND4BO75064 1496 aaPredicted RBP18.8■□□□□ 0.6
SCAMP4-207ENST00000472442 BCANQ96GW7 911 aa18.8■□□□□ 0.6
SCAMP4-207ENST00000472442 ZNF777Q9ULD5 760 aaPredicted RBP18.79■□□□□ 0.6
SCAMP4-207ENST00000472442 TIMELESSQ9UNS1 1208 aa18.79■□□□□ 0.6
SCAMP4-207ENST00000472442 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
SCAMP4-207ENST00000472442 ABCC2Q92887 1545 aa18.76■□□□□ 0.59
SCAMP4-207ENST00000472442 TRIM52Q96A61 297 aa18.75■□□□□ 0.59
SCAMP4-207ENST00000472442 CROCC2H7BZ55 1655 aa18.73■□□□□ 0.59
SCAMP4-207ENST00000472442 PPP1R15AO75807 674 aaPredicted RBP18.73■□□□□ 0.59
SCAMP4-207ENST00000472442 NCOA1Q15788 1441 aa18.73■□□□□ 0.59
SCAMP4-207ENST00000472442 MPHOSPH9Q99550 1183 aa18.71■□□□□ 0.59
SCAMP4-207ENST00000472442 ADGRL2O95490 1459 aa18.7■□□□□ 0.58
SCAMP4-207ENST00000472442 FKBP8Q14318 412 aa18.7■□□□□ 0.58
SCAMP4-207ENST00000472442 ADGBQ8N7X0 1667 aa18.7■□□□□ 0.58
SCAMP4-207ENST00000472442 TONSLQ96HA7 1378 aa18.68■□□□□ 0.58
SCAMP4-207ENST00000472442 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
SCAMP4-207ENST00000472442 PREX2Q70Z35 1606 aa18.66■□□□□ 0.58
SCAMP4-207ENST00000472442 UHRF1BP1LA0JNW5 1464 aa18.66■□□□□ 0.58
SCAMP4-207ENST00000472442 TTC37Q6PGP7 1564 aa18.66■□□□□ 0.58
SCAMP4-207ENST00000472442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCAMP4-207ENST00000472442 KDM5BQ9UGL1 1544 aa18.65■□□□□ 0.58
SCAMP4-207ENST00000472442 FOXD1Q16676 465 aa18.65■□□□□ 0.58
SCAMP4-207ENST00000472442 MBD5Q9P267 1494 aa18.65■□□□□ 0.58
SCAMP4-207ENST00000472442 SAMD9LQ8IVG5 1584 aa18.64■□□□□ 0.58
SCAMP4-207ENST00000472442 HNRNPMP52272 730 aaKnown RBP eCLIP18.64■□□□□ 0.57
SCAMP4-207ENST00000472442 ZCCHC11Q5TAX3 1644 aaKnown RBP18.64■□□□□ 0.57
SCAMP4-207ENST00000472442 ANKRD30AQ9BXX3 1397 aa18.64■□□□□ 0.57
SCAMP4-207ENST00000472442 SHANK2Q9UPX8 1470 aa18.64■□□□□ 0.57
SCAMP4-207ENST00000472442 C9orf84Q5VXU9 1444 aa18.63■□□□□ 0.57
SCAMP4-207ENST00000472442 ARHGEF5Q12774 1597 aa18.62■□□□□ 0.57
SCAMP4-207ENST00000472442 PZPP20742 1482 aa18.6■□□□□ 0.57
SCAMP4-207ENST00000472442 ANKRD30BQ9BXX2 1392 aa18.6■□□□□ 0.57
SCAMP4-207ENST00000472442 ANKRD50Q9ULJ7 1429 aa18.59■□□□□ 0.57
SCAMP4-207ENST00000472442 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-207ENST00000472442 RBM19Q9Y4C8 960 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-207ENST00000472442 DDX10Q13206 875 aaKnown RBP18.58■□□□□ 0.57
SCAMP4-207ENST00000472442 TSPY4P0CV99 314 aa18.58■□□□□ 0.56
SCAMP4-207ENST00000472442 TSPY10P0CW01 314 aa18.58■□□□□ 0.56
SCAMP4-207ENST00000472442 ARHGAP5Q13017 1502 aa18.57■□□□□ 0.56
SCAMP4-207ENST00000472442 CCDC141Q6ZP82 1450 aa18.56■□□□□ 0.56
SCAMP4-207ENST00000472442 MYO5CQ9NQX4 1742 aa18.55■□□□□ 0.56
SCAMP4-207ENST00000472442 NEFLP07196 543 aa18.55■□□□□ 0.56
SCAMP4-207ENST00000472442 SYCP2Q9BX26 1530 aa18.55■□□□□ 0.56
SCAMP4-207ENST00000472442 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
SCAMP4-207ENST00000472442 KIF15Q9NS87 1388 aa18.53■□□□□ 0.56
SCAMP4-207ENST00000472442 RPRD2Q5VT52 1461 aaKnown RBP18.53■□□□□ 0.56
SCAMP4-207ENST00000472442 RSPH4AQ5TD94 716 aa18.52■□□□□ 0.56
SCAMP4-207ENST00000472442 PLCH2O75038 1416 aa18.51■□□□□ 0.55
SCAMP4-207ENST00000472442 L3MBTL2Q969R5 705 aa18.51■□□□□ 0.55
SCAMP4-207ENST00000472442 OSCARQ8IYS5 282 aa18.5■□□□□ 0.55
SCAMP4-207ENST00000472442 ARHGEF12Q9NZN5 1544 aa18.5■□□□□ 0.55
SCAMP4-207ENST00000472442 KIAA1107Q9UPP5 1409 aa18.5■□□□□ 0.55
SCAMP4-207ENST00000472442 MAST1Q9Y2H9 1570 aa18.47■□□□□ 0.55
SCAMP4-207ENST00000472442 PKD2Q13563 968 aa18.47■□□□□ 0.55
SCAMP4-207ENST00000472442 NUP155O75694 1391 aa18.47■□□□□ 0.55
SCAMP4-207ENST00000472442 TEX14Q8IWB6 1497 aa18.47■□□□□ 0.55
SCAMP4-207ENST00000472442 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.55
SCAMP4-207ENST00000472442 KDM5DQ9BY66 1539 aa18.46■□□□□ 0.55
SCAMP4-207ENST00000472442 WDR7Q9Y4E6 1490 aa18.45■□□□□ 0.54
SCAMP4-207ENST00000472442 EFCAB2Q5VUJ9 269 aa18.44■□□□□ 0.54
SCAMP4-207ENST00000472442 ABCC1P33527 1531 aa18.42■□□□□ 0.54
SCAMP4-207ENST00000472442 MSH5O43196 834 aa18.41■□□□□ 0.54
SCAMP4-207ENST00000472442 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
SCAMP4-207ENST00000472442 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
SCAMP4-207ENST00000472442 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
SCAMP4-207ENST00000472442 TRAPPC8Q9Y2L5 1435 aa18.39■□□□□ 0.54
SCAMP4-207ENST00000472442 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.53
SCAMP4-207ENST00000472442 ANP32CO43423 234 aa18.39■□□□□ 0.53
SCAMP4-207ENST00000472442 ASXL2Q76L83 1435 aa18.38■□□□□ 0.53
SCAMP4-207ENST00000472442 FAM135AQ9P2D6 1515 aa18.36■□□□□ 0.53
SCAMP4-207ENST00000472442 ABCA9Q8IUA7 1624 aa18.36■□□□□ 0.53
SCAMP4-207ENST00000472442 HSPA5P11021 654 aaKnown RBP18.36■□□□□ 0.53
SCAMP4-207ENST00000472442 UNC13BO14795 1591 aa18.34■□□□□ 0.53
SCAMP4-207ENST00000472442 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.53
SCAMP4-207ENST00000472442 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
SCAMP4-207ENST00000472442 FANCAO15360 1455 aa18.32■□□□□ 0.52
SCAMP4-207ENST00000472442 EIF4G2P78344 907 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCAMP4-207ENST00000472442 ERBINQ96RT1 1412 aa18.3■□□□□ 0.52
SCAMP4-207ENST00000472442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.52
SCAMP4-207ENST00000472442 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
SCAMP4-207ENST00000472442 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
SCAMP4-207ENST00000472442 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms