RNA–Protein interactions for RNA: ENST00000472429.1

GRIK1-208, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

TSL 1 (best)

Gene GRIK1, Length 1,775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-208ENST00000472429 PTPN23Q9H3S7 1636 aa23.56■■□□□ 1.36
GRIK1-208ENST00000472429 CCDC18Q5T9S5 1454 aa23.56■■□□□ 1.36
GRIK1-208ENST00000472429 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
GRIK1-208ENST00000472429 PLEKHD1A6NEE1 506 aa23.55■■□□□ 1.36
GRIK1-208ENST00000472429 FAM69CQ0P6D2 419 aa23.55■■□□□ 1.36
GRIK1-208ENST00000472429 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
GRIK1-208ENST00000472429 ABCC10Q5T3U5 1492 aa23.54■■□□□ 1.36
GRIK1-208ENST00000472429 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
GRIK1-208ENST00000472429 CDK11AQ9UQ88 783 aaPredicted RBP23.51■■□□□ 1.35
GRIK1-208ENST00000472429 DIP2BQ9P265 1576 aa23.5■■□□□ 1.35
GRIK1-208ENST00000472429 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
GRIK1-208ENST00000472429 NAIPQ13075 1403 aa23.48■■□□□ 1.35
GRIK1-208ENST00000472429 MAGI3Q5TCQ9 1506 aa23.47■■□□□ 1.35
GRIK1-208ENST00000472429 PPP1R15AO75807 674 aaPredicted RBP23.47■■□□□ 1.35
GRIK1-208ENST00000472429 KIF13AQ9H1H9 1805 aa23.45■■□□□ 1.34
GRIK1-208ENST00000472429 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
GRIK1-208ENST00000472429 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
GRIK1-208ENST00000472429 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
GRIK1-208ENST00000472429 GLI2P10070 1586 aa23.4■■□□□ 1.34
GRIK1-208ENST00000472429 TONSLQ96HA7 1378 aa23.37■■□□□ 1.33
GRIK1-208ENST00000472429 MIA2Q96PC5 1412 aa23.36■■□□□ 1.33
GRIK1-208ENST00000472429 KIF14Q15058 1648 aa23.34■■□□□ 1.33
GRIK1-208ENST00000472429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.34■■□□□ 1.33
GRIK1-208ENST00000472429 CD109Q6YHK3 1445 aa23.34■■□□□ 1.33
GRIK1-208ENST00000472429 ABCA9Q8IUA7 1624 aa23.32■■□□□ 1.32
GRIK1-208ENST00000472429 MAP3K4Q9Y6R4 1608 aa23.32■■□□□ 1.32
GRIK1-208ENST00000472429 TSPOAP1O95153 1857 aa23.32■■□□□ 1.32
GRIK1-208ENST00000472429 DDX10Q13206 875 aaKnown RBP23.31■■□□□ 1.32
GRIK1-208ENST00000472429 TTC37Q6PGP7 1564 aa23.3■■□□□ 1.32
GRIK1-208ENST00000472429 SUPT16HQ9Y5B9 1047 aaKnown RBP23.29■■□□□ 1.32
GRIK1-208ENST00000472429 CCER2I3L3R5 266 aa23.26■■□□□ 1.31
GRIK1-208ENST00000472429 PPRC1Q5VV67 1664 aaKnown RBP23.24■■□□□ 1.31
GRIK1-208ENST00000472429 DENND4BO75064 1496 aaPredicted RBP23.23■■□□□ 1.31
GRIK1-208ENST00000472429 PLCH2O75038 1416 aa23.2■■□□□ 1.3
GRIK1-208ENST00000472429 TEX14Q8IWB6 1497 aa23.2■■□□□ 1.3
GRIK1-208ENST00000472429 KDM6BO15054 1643 aa23.19■■□□□ 1.3
GRIK1-208ENST00000472429 ROCK1Q13464 1354 aa23.18■■□□□ 1.3
GRIK1-208ENST00000472429 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
GRIK1-208ENST00000472429 GPATCH8Q9UKJ3 1502 aaKnown RBP23.16■■□□□ 1.3
GRIK1-208ENST00000472429 FANCAO15360 1455 aa23.15■■□□□ 1.3
GRIK1-208ENST00000472429 DNMT1P26358 1616 aaKnown RBP23.15■■□□□ 1.3
GRIK1-208ENST00000472429 ANP32CO43423 234 aa23.15■■□□□ 1.3
GRIK1-208ENST00000472429 RRP7BPQ9NSQ0 103 aa23.15■■□□□ 1.3
GRIK1-208ENST00000472429 ARHGAP5Q13017 1502 aa23.14■■□□□ 1.29
GRIK1-208ENST00000472429 EFCAB2Q5VUJ9 269 aa23.13■■□□□ 1.29
GRIK1-208ENST00000472429 DAPK1P53355 1430 aa23.12■■□□□ 1.29
GRIK1-208ENST00000472429 CDC42BPAQ5VT25 1732 aa23.12■■□□□ 1.29
GRIK1-208ENST00000472429 HIRIP3Q9BW71 556 aaPredicted RBP23.12■■□□□ 1.29
GRIK1-208ENST00000472429 CFDP1Q9UEE9 299 aaPredicted RBP23.12■■□□□ 1.29
GRIK1-208ENST00000472429 PREX2Q70Z35 1606 aa23.11■■□□□ 1.29
GRIK1-208ENST00000472429 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
GRIK1-208ENST00000472429 CDC42BPBQ9Y5S2 1711 aa23.11■■□□□ 1.29
GRIK1-208ENST00000472429 NEO1Q92859 1461 aa23.1■■□□□ 1.29
GRIK1-208ENST00000472429 ARAP3Q8WWN8 1544 aa23.1■■□□□ 1.29
GRIK1-208ENST00000472429 CHIC2Q9UKJ5 165 aa23.09■■□□□ 1.29
GRIK1-208ENST00000472429 COL17A1Q9UMD9 1497 aaPredicted RBP23.07■■□□□ 1.28
GRIK1-208ENST00000472429 ABCC5O15440 1437 aa23.07■■□□□ 1.28
GRIK1-208ENST00000472429 MPHOSPH9Q99550 1183 aa23.06■■□□□ 1.28
GRIK1-208ENST00000472429 CFAP74Q9C0B2 1584 aa23.05■■□□□ 1.28
GRIK1-208ENST00000472429 TRIM52Q96A61 297 aa23.04■■□□□ 1.28
GRIK1-208ENST00000472429 ITSN2Q9NZM3 1697 aa23.04■■□□□ 1.28
GRIK1-208ENST00000472429 ZNF644Q9H582 1327 aaPredicted RBP23.03■■□□□ 1.28
GRIK1-208ENST00000472429 ADGRL1O94910 1474 aa23.03■■□□□ 1.28
GRIK1-208ENST00000472429 RAPGEF3O95398 923 aa23.02■■□□□ 1.28
GRIK1-208ENST00000472429 SCAPERQ9BY12 1400 aa23.02■■□□□ 1.27
GRIK1-208ENST00000472429 RPRD2Q5VT52 1461 aaKnown RBP23■■□□□ 1.27
GRIK1-208ENST00000472429 MYT1Q01538 1121 aa23■■□□□ 1.27
GRIK1-208ENST00000472429 SAMD9LQ8IVG5 1584 aa23■■□□□ 1.27
GRIK1-208ENST00000472429 ANKRD30BQ9BXX2 1392 aa22.99■■□□□ 1.27
GRIK1-208ENST00000472429 ADGBQ8N7X0 1667 aa22.98■■□□□ 1.27
GRIK1-208ENST00000472429 HSPA5P11021 654 aaKnown RBP22.97■■□□□ 1.27
GRIK1-208ENST00000472429 HNRNPMP52272 730 aaKnown RBP eCLIP22.96■■□□□ 1.27
GRIK1-208ENST00000472429 ABCC1P33527 1531 aa22.96■■□□□ 1.27
GRIK1-208ENST00000472429 ARHGEF12Q9NZN5 1544 aa22.96■■□□□ 1.27
GRIK1-208ENST00000472429 CAMSAP2Q08AD1 1489 aa22.95■■□□□ 1.26
GRIK1-208ENST00000472429 WASHC2AQ641Q2 1341 aa22.94■■□□□ 1.26
GRIK1-208ENST00000472429 ADGRL2O95490 1459 aa22.94■■□□□ 1.26
GRIK1-208ENST00000472429 EIF4G2P78344 907 aaKnown RBP eCLIP22.94■■□□□ 1.26
GRIK1-208ENST00000472429 AFAP1Q8N556 730 aa22.94■■□□□ 1.26
GRIK1-208ENST00000472429 SYCP2Q9BX26 1530 aa22.94■■□□□ 1.26
GRIK1-208ENST00000472429 CROCC2H7BZ55 1655 aa22.93■■□□□ 1.26
GRIK1-208ENST00000472429 POGZQ7Z3K3 1410 aa22.93■■□□□ 1.26
GRIK1-208ENST00000472429 L3MBTL2Q969R5 705 aa22.92■■□□□ 1.26
GRIK1-208ENST00000472429 TRAPPC8Q9Y2L5 1435 aa22.92■■□□□ 1.26
GRIK1-208ENST00000472429 PLEKHH2Q8IVE3 1493 aa22.92■■□□□ 1.26
GRIK1-208ENST00000472429 CNTLNQ9NXG0 1405 aa22.91■■□□□ 1.26
GRIK1-208ENST00000472429 KIAA1107Q9UPP5 1409 aa22.91■■□□□ 1.26
GRIK1-208ENST00000472429 FRMPD1Q5SYB0 1578 aa22.91■■□□□ 1.26
GRIK1-208ENST00000472429 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
GRIK1-208ENST00000472429 PZPP20742 1482 aa22.89■■□□□ 1.26
GRIK1-208ENST00000472429 RICTORQ6R327 1708 aa22.89■■□□□ 1.25
GRIK1-208ENST00000472429 ZNF518AQ6AHZ1 1483 aa22.88■■□□□ 1.25
GRIK1-208ENST00000472429 MBD5Q9P267 1494 aa22.87■■□□□ 1.25
GRIK1-208ENST00000472429 TSHZ2Q9NRE2 1034 aa22.86■■□□□ 1.25
GRIK1-208ENST00000472429 FKBP8Q14318 412 aa22.86■■□□□ 1.25
GRIK1-208ENST00000472429 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
GRIK1-208ENST00000472429 CCDC7Q96M83 1385 aa22.85■■□□□ 1.25
GRIK1-208ENST00000472429 MYT1LQ9UL68 1186 aa22.84■■□□□ 1.25
GRIK1-208ENST00000472429 NEFLP07196 543 aa22.84■■□□□ 1.25
GRIK1-208ENST00000472429 FOXD1Q16676 465 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms