RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 RRP7BPQ9NSQ0 103 aa26.82■■□□□ 1.88
GCFC2-208ENST00000472230 ZNF777Q9ULD5 760 aaPredicted RBP26.82■■□□□ 1.88
GCFC2-208ENST00000472230 OSCARQ8IYS5 282 aa26.81■■□□□ 1.88
GCFC2-208ENST00000472230 ABCC5O15440 1437 aa26.8■■□□□ 1.88
GCFC2-208ENST00000472230 ZCCHC11Q5TAX3 1644 aaKnown RBP26.78■■□□□ 1.88
GCFC2-208ENST00000472230 ROCK1Q13464 1354 aa26.76■■□□□ 1.87
GCFC2-208ENST00000472230 KDM5BQ9UGL1 1544 aa26.73■■□□□ 1.87
GCFC2-208ENST00000472230 CROCC2H7BZ55 1655 aa26.72■■□□□ 1.87
GCFC2-208ENST00000472230 ADGBQ8N7X0 1667 aa26.72■■□□□ 1.87
GCFC2-208ENST00000472230 PREX2Q70Z35 1606 aa26.72■■□□□ 1.87
GCFC2-208ENST00000472230 CDC42BPBQ9Y5S2 1711 aa26.68■■□□□ 1.86
GCFC2-208ENST00000472230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.67■■□□□ 1.86
GCFC2-208ENST00000472230 TTC37Q6PGP7 1564 aa26.67■■□□□ 1.86
GCFC2-208ENST00000472230 ACIN1Q9UKV3 1341 aaKnown RBP26.66■■□□□ 1.86
GCFC2-208ENST00000472230 KDM6BO15054 1643 aa26.66■■□□□ 1.86
GCFC2-208ENST00000472230 MYO5CQ9NQX4 1742 aa26.65■■□□□ 1.86
GCFC2-208ENST00000472230 ZNF316A6NFI3 1004 aaPredicted RBP26.65■■□□□ 1.86
GCFC2-208ENST00000472230 TRIM52Q96A61 297 aa26.64■■□□□ 1.86
GCFC2-208ENST00000472230 KCNH8Q96L42 1107 aa26.64■■□□□ 1.85
GCFC2-208ENST00000472230 ADGRL2O95490 1459 aa26.62■■□□□ 1.85
GCFC2-208ENST00000472230 ARHGAP5Q13017 1502 aa26.61■■□□□ 1.85
GCFC2-208ENST00000472230 NEUROD1Q13562 356 aa26.61■■□□□ 1.85
GCFC2-208ENST00000472230 SAMD9LQ8IVG5 1584 aa26.6■■□□□ 1.85
GCFC2-208ENST00000472230 ARHGEF5Q12774 1597 aa26.6■■□□□ 1.85
GCFC2-208ENST00000472230 SIN3AQ96ST3 1273 aa26.6■■□□□ 1.85
GCFC2-208ENST00000472230 SHANK2Q9UPX8 1470 aa26.6■■□□□ 1.85
GCFC2-208ENST00000472230 ANKRD30AQ9BXX3 1397 aa26.59■■□□□ 1.85
GCFC2-208ENST00000472230 NCOA1Q15788 1441 aa26.58■■□□□ 1.85
GCFC2-208ENST00000472230 TSPY4P0CV99 314 aa26.56■■□□□ 1.84
GCFC2-208ENST00000472230 TSPY10P0CW01 314 aa26.56■■□□□ 1.84
GCFC2-208ENST00000472230 HNRNPMP52272 730 aaKnown RBP eCLIP26.55■■□□□ 1.84
GCFC2-208ENST00000472230 TIMELESSQ9UNS1 1208 aa26.55■■□□□ 1.84
GCFC2-208ENST00000472230 C9orf84Q5VXU9 1444 aa26.55■■□□□ 1.84
GCFC2-208ENST00000472230 RSPH4AQ5TD94 716 aa26.53■■□□□ 1.84
GCFC2-208ENST00000472230 CCDC141Q6ZP82 1450 aa26.52■■□□□ 1.84
GCFC2-208ENST00000472230 MBD5Q9P267 1494 aa26.51■■□□□ 1.83
GCFC2-208ENST00000472230 PLEKHH2Q8IVE3 1493 aa26.51■■□□□ 1.83
GCFC2-208ENST00000472230 WDR7Q9Y4E6 1490 aa26.51■■□□□ 1.83
GCFC2-208ENST00000472230 PLCH2O75038 1416 aa26.49■■□□□ 1.83
GCFC2-208ENST00000472230 SYCP2Q9BX26 1530 aa26.49■■□□□ 1.83
GCFC2-208ENST00000472230 MPHOSPH9Q99550 1183 aa26.49■■□□□ 1.83
GCFC2-208ENST00000472230 DIEXFQ68CQ4 756 aaKnown RBP26.48■■□□□ 1.83
GCFC2-208ENST00000472230 NPM1P06748 294 aaKnown RBP eCLIP26.46■■□□□ 1.83
GCFC2-208ENST00000472230 EFCAB2Q5VUJ9 269 aa26.45■■□□□ 1.82
GCFC2-208ENST00000472230 TONSLQ96HA7 1378 aa26.45■■□□□ 1.82
GCFC2-208ENST00000472230 ANKRD50Q9ULJ7 1429 aa26.44■■□□□ 1.82
GCFC2-208ENST00000472230 KIAA1107Q9UPP5 1409 aa26.44■■□□□ 1.82
GCFC2-208ENST00000472230 DENND4BO75064 1496 aaPredicted RBP26.42■■□□□ 1.82
GCFC2-208ENST00000472230 ASXL2Q76L83 1435 aa26.41■■□□□ 1.82
GCFC2-208ENST00000472230 MAST1Q9Y2H9 1570 aa26.4■■□□□ 1.82
GCFC2-208ENST00000472230 ARAP3Q8WWN8 1544 aa26.4■■□□□ 1.82
GCFC2-208ENST00000472230 KIF15Q9NS87 1388 aa26.39■■□□□ 1.82
GCFC2-208ENST00000472230 SLC4A1APQ9BWU0 796 aaKnown RBP26.39■■□□□ 1.82
GCFC2-208ENST00000472230 ABCA9Q8IUA7 1624 aa26.38■■□□□ 1.81
GCFC2-208ENST00000472230 ABCC1P33527 1531 aa26.36■■□□□ 1.81
GCFC2-208ENST00000472230 PPP1R15AO75807 674 aaPredicted RBP26.34■■□□□ 1.81
GCFC2-208ENST00000472230 PZPP20742 1482 aa26.33■■□□□ 1.81
GCFC2-208ENST00000472230 ARHGEF12Q9NZN5 1544 aa26.32■■□□□ 1.8
GCFC2-208ENST00000472230 FOXD1Q16676 465 aa26.31■■□□□ 1.8
GCFC2-208ENST00000472230 PLXNC1O60486 1568 aa26.3■■□□□ 1.8
GCFC2-208ENST00000472230 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
GCFC2-208ENST00000472230 FANCAO15360 1455 aa26.27■■□□□ 1.8
GCFC2-208ENST00000472230 NUP155O75694 1391 aa26.26■■□□□ 1.8
GCFC2-208ENST00000472230 KDM5DQ9BY66 1539 aa26.25■■□□□ 1.79
GCFC2-208ENST00000472230 TRAPPC8Q9Y2L5 1435 aa26.23■■□□□ 1.79
GCFC2-208ENST00000472230 DUOX2Q9NRD8 1548 aa26.22■■□□□ 1.79
GCFC2-208ENST00000472230 PKD2Q13563 968 aa26.21■■□□□ 1.79
GCFC2-208ENST00000472230 RPRD2Q5VT52 1461 aaKnown RBP26.2■■□□□ 1.78
GCFC2-208ENST00000472230 RIMBP3CA6NJZ7 1639 aa26.18■■□□□ 1.78
GCFC2-208ENST00000472230 RIMBP3BA6NNM3 1639 aa26.18■■□□□ 1.78
GCFC2-208ENST00000472230 RIMBP3Q9UFD9 1639 aa26.18■■□□□ 1.78
GCFC2-208ENST00000472230 SPAG9O60271 1321 aaKnown RBP26.18■■□□□ 1.78
GCFC2-208ENST00000472230 ADGRL1O94910 1474 aa26.17■■□□□ 1.78
GCFC2-208ENST00000472230 UNC13BO14795 1591 aa26.16■■□□□ 1.78
GCFC2-208ENST00000472230 RTEL1-TNFRSF6BF6WH68 1400 aa26.16■■□□□ 1.78
GCFC2-208ENST00000472230 CFAP74Q9C0B2 1584 aa26.15■■□□□ 1.78
GCFC2-208ENST00000472230 ERBINQ96RT1 1412 aa26.15■■□□□ 1.78
GCFC2-208ENST00000472230 CYB5RLQ6IPT4 315 aa26.13■■□□□ 1.77
GCFC2-208ENST00000472230 AFAP1Q8N556 730 aa26.13■■□□□ 1.77
GCFC2-208ENST00000472230 CD109Q6YHK3 1445 aa26.13■■□□□ 1.77
GCFC2-208ENST00000472230 SCAPERQ9BY12 1400 aa26.13■■□□□ 1.77
GCFC2-208ENST00000472230 ZFYVE16Q7Z3T8 1539 aa26.12■■□□□ 1.77
GCFC2-208ENST00000472230 FAM135AQ9P2D6 1515 aa26.12■■□□□ 1.77
GCFC2-208ENST00000472230 L3MBTL2Q969R5 705 aa26.11■■□□□ 1.77
GCFC2-208ENST00000472230 ATP7AQ04656 1500 aa26.08■■□□□ 1.77
GCFC2-208ENST00000472230 INO80Q9ULG1 1556 aaPredicted RBP26.08■■□□□ 1.77
GCFC2-208ENST00000472230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.08■■□□□ 1.779e-7■■□□□ 14.5
GCFC2-208ENST00000472230 MYT1LQ9UL68 1186 aa26.08■■□□□ 1.77
GCFC2-208ENST00000472230 IQGAP3Q86VI3 1631 aa26.06■■□□□ 1.76
GCFC2-208ENST00000472230 TEX14Q8IWB6 1497 aa26.06■■□□□ 1.76
GCFC2-208ENST00000472230 MAGI2Q86UL8 1455 aa26.01■■□□□ 1.76
GCFC2-208ENST00000472230 ZNF518AQ6AHZ1 1483 aa26.01■■□□□ 1.75
GCFC2-208ENST00000472230 MIER1Q8N108 512 aa25.98■■□□□ 1.75
GCFC2-208ENST00000472230 NEO1Q92859 1461 aa25.95■■□□□ 1.75
GCFC2-208ENST00000472230 HIRIP3Q9BW71 556 aaPredicted RBP25.95■■□□□ 1.74
GCFC2-208ENST00000472230 KIDINS220Q9ULH0 1771 aa25.94■■□□□ 1.74
GCFC2-208ENST00000472230 MAP3K4Q9Y6R4 1608 aa25.94■■□□□ 1.74
GCFC2-208ENST00000472230 POGZQ7Z3K3 1410 aa25.93■■□□□ 1.74
GCFC2-208ENST00000472230 EIF2AK4Q9P2K8 1649 aaKnown RBP25.93■■□□□ 1.74
GCFC2-208ENST00000472230 GLI2P10070 1586 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms