RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
UBXN11-213ENST00000472155 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
UBXN11-213ENST00000472155 CDK11AQ9UQ88 783 aaPredicted RBP21.51■■□□□ 1.03
UBXN11-213ENST00000472155 TROQ12816 1431 aaPredicted RBP21.5■■□□□ 1.03
UBXN11-213ENST00000472155 MPHOSPH9Q99550 1183 aa21.5■■□□□ 1.03
UBXN11-213ENST00000472155 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
UBXN11-213ENST00000472155 CFDP1Q9UEE9 299 aaPredicted RBP21.47■■□□□ 1.03
UBXN11-213ENST00000472155 AKNAQ7Z591 1439 aa21.46■■□□□ 1.03
UBXN11-213ENST00000472155 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
UBXN11-213ENST00000472155 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
UBXN11-213ENST00000472155 CAMSAP2Q08AD1 1489 aa21.43■■□□□ 1.02
UBXN11-213ENST00000472155 ATP10BO94823 1461 aa21.41■■□□□ 1.02
UBXN11-213ENST00000472155 ABCA8O94911 1581 aa21.4■■□□□ 1.02
UBXN11-213ENST00000472155 ROCK1Q13464 1354 aa21.38■■□□□ 1.01
UBXN11-213ENST00000472155 L3MBTL2Q969R5 705 aa21.37■■□□□ 1.01
UBXN11-213ENST00000472155 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
UBXN11-213ENST00000472155 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
UBXN11-213ENST00000472155 CHD1O14646 1710 aa21.34■■□□□ 1.01
UBXN11-213ENST00000472155 ADCY10Q96PN6 1610 aa21.34■■□□□ 1.01
UBXN11-213ENST00000472155 NCOA1Q15788 1441 aa21.33■■□□□ 1.01
UBXN11-213ENST00000472155 ANKRD30BQ9BXX2 1392 aa21.32■■□□□ 1
UBXN11-213ENST00000472155 PTPRGP23470 1445 aa21.32■■□□□ 1
UBXN11-213ENST00000472155 ITSN2Q9NZM3 1697 aa21.31■■□□□ 1
UBXN11-213ENST00000472155 CDC42BPAQ5VT25 1732 aa21.31■■□□□ 1
UBXN11-213ENST00000472155 ABCC10Q5T3U5 1492 aa21.3■■□□□ 1
UBXN11-213ENST00000472155 HSPA5P11021 654 aaKnown RBP21.29■■□□□ 1
UBXN11-213ENST00000472155 ERCC6L2Q5T890 1561 aa21.29■■□□□ 1
UBXN11-213ENST00000472155 NBPF8Q3BBV2 869 aa21.28■■□□□ 1
UBXN11-213ENST00000472155 PZPP20742 1482 aa21.28■■□□□ 1
UBXN11-213ENST00000472155 HNRNPMP52272 730 aaKnown RBP eCLIP21.27■■□□□ 1
UBXN11-213ENST00000472155 PELP1Q8IZL8 1130 aaKnown RBP21.25■□□□□ 0.99
UBXN11-213ENST00000472155 CROCC2H7BZ55 1655 aa21.24■□□□□ 0.99
UBXN11-213ENST00000472155 WASHC2AQ641Q2 1341 aa21.23■□□□□ 0.99
UBXN11-213ENST00000472155 RPRD2Q5VT52 1461 aaKnown RBP21.23■□□□□ 0.99
UBXN11-213ENST00000472155 ADGBQ8N7X0 1667 aa21.22■□□□□ 0.99
UBXN11-213ENST00000472155 C11orf95C9JLR9 678 aaPredicted RBP21.22■□□□□ 0.99
UBXN11-213ENST00000472155 TEX14Q8IWB6 1497 aa21.21■□□□□ 0.99
UBXN11-213ENST00000472155 ADGRL2O95490 1459 aa21.2■□□□□ 0.98
UBXN11-213ENST00000472155 ANP32CO43423 234 aa21.2■□□□□ 0.98
UBXN11-213ENST00000472155 PKD2Q13563 968 aa21.2■□□□□ 0.98
UBXN11-213ENST00000472155 ANKRD30AQ9BXX3 1397 aa21.2■□□□□ 0.98
UBXN11-213ENST00000472155 C9orf84Q5VXU9 1444 aa21.18■□□□□ 0.98
UBXN11-213ENST00000472155 ANKRD50Q9ULJ7 1429 aa21.18■□□□□ 0.98
UBXN11-213ENST00000472155 EIF4G2P78344 907 aaKnown RBP eCLIP21.16■□□□□ 0.98
UBXN11-213ENST00000472155 SHROOM2Q13796 1616 aa21.14■□□□□ 0.97
UBXN11-213ENST00000472155 CDC42BPBQ9Y5S2 1711 aa21.13■□□□□ 0.97
UBXN11-213ENST00000472155 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
UBXN11-213ENST00000472155 TSPY4P0CV99 314 aa21.12■□□□□ 0.97
UBXN11-213ENST00000472155 TSPY10P0CW01 314 aa21.12■□□□□ 0.97
UBXN11-213ENST00000472155 SAMD9LQ8IVG5 1584 aa21.12■□□□□ 0.97
UBXN11-213ENST00000472155 ZNF326Q5BKZ1 582 aaKnown RBP21.12■□□□□ 0.97
UBXN11-213ENST00000472155 NUP155O75694 1391 aa21.12■□□□□ 0.97
UBXN11-213ENST00000472155 KIAA1107Q9UPP5 1409 aa21.12■□□□□ 0.97
UBXN11-213ENST00000472155 TTC37Q6PGP7 1564 aa21.1■□□□□ 0.97
UBXN11-213ENST00000472155 KIF15Q9NS87 1388 aa21.1■□□□□ 0.97
UBXN11-213ENST00000472155 SUPT16HQ9Y5B9 1047 aaKnown RBP21.09■□□□□ 0.97
UBXN11-213ENST00000472155 CCER2I3L3R5 266 aa21.08■□□□□ 0.97
UBXN11-213ENST00000472155 SHANK2Q9UPX8 1470 aa21.07■□□□□ 0.96
UBXN11-213ENST00000472155 PREX2Q70Z35 1606 aa21.06■□□□□ 0.96
UBXN11-213ENST00000472155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.06■□□□□ 0.96
UBXN11-213ENST00000472155 SYCP2Q9BX26 1530 aa21.04■□□□□ 0.96
UBXN11-213ENST00000472155 CCDC184Q52MB2 194 aa21.04■□□□□ 0.96
UBXN11-213ENST00000472155 ABCC2Q92887 1545 aa21.03■□□□□ 0.96
UBXN11-213ENST00000472155 SPATA31E1Q6ZUB1 1445 aa21.03■□□□□ 0.96
UBXN11-213ENST00000472155 CCDC7Q96M83 1385 aa21.02■□□□□ 0.96
UBXN11-213ENST00000472155 ARHGAP5Q13017 1502 aa21.02■□□□□ 0.96
UBXN11-213ENST00000472155 CCDC141Q6ZP82 1450 aa21.02■□□□□ 0.96
UBXN11-213ENST00000472155 ARHGEF5Q12774 1597 aa21.02■□□□□ 0.95
UBXN11-213ENST00000472155 KIF7Q2M1P5 1343 aa20.99■□□□□ 0.95
UBXN11-213ENST00000472155 KDM2AQ9Y2K7 1162 aa20.98■□□□□ 0.95
UBXN11-213ENST00000472155 CLASP1Q7Z460 1538 aa20.97■□□□□ 0.95
UBXN11-213ENST00000472155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.97■□□□□ 0.954e-6■■■■□ 19.8
UBXN11-213ENST00000472155 CNTLNQ9NXG0 1405 aa20.97■□□□□ 0.95
UBXN11-213ENST00000472155 ARHGEF12Q9NZN5 1544 aa20.97■□□□□ 0.95
UBXN11-213ENST00000472155 CNGB1Q14028 1251 aaPredicted RBP20.96■□□□□ 0.95
UBXN11-213ENST00000472155 ZCCHC11Q5TAX3 1644 aaKnown RBP20.94■□□□□ 0.94
UBXN11-213ENST00000472155 POLR3GLQ9BT43 218 aa20.93■□□□□ 0.94
UBXN11-213ENST00000472155 KDM5DQ9BY66 1539 aa20.93■□□□□ 0.94
UBXN11-213ENST00000472155 BCANQ96GW7 911 aa20.93■□□□□ 0.94
UBXN11-213ENST00000472155 USP47Q96K76 1375 aa20.92■□□□□ 0.94
UBXN11-213ENST00000472155 BCORL1Q5H9F3 1711 aa20.92■□□□□ 0.94
UBXN11-213ENST00000472155 FAM135AQ9P2D6 1515 aa20.91■□□□□ 0.94
UBXN11-213ENST00000472155 MYO5CQ9NQX4 1742 aa20.91■□□□□ 0.94
UBXN11-213ENST00000472155 DCAF11Q8TEB1 546 aa20.91■□□□□ 0.94
UBXN11-213ENST00000472155 PLEKHH2Q8IVE3 1493 aa20.9■□□□□ 0.94
UBXN11-213ENST00000472155 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
UBXN11-213ENST00000472155 HNRNPUQ00839 825 aaKnown RBP eCLIP20.88■□□□□ 0.93
UBXN11-213ENST00000472155 FKBP8Q14318 412 aa20.87■□□□□ 0.93
UBXN11-213ENST00000472155 RSPH4AQ5TD94 716 aa20.87■□□□□ 0.93
UBXN11-213ENST00000472155 RGL3Q3MIN7 710 aa20.87■□□□□ 0.93
UBXN11-213ENST00000472155 TRAPPC8Q9Y2L5 1435 aa20.85■□□□□ 0.93
UBXN11-213ENST00000472155 PLCH2O75038 1416 aa20.85■□□□□ 0.93
UBXN11-213ENST00000472155 PLA2R1Q13018 1463 aa20.85■□□□□ 0.93
UBXN11-213ENST00000472155 KDM5CP41229 1560 aa20.84■□□□□ 0.93
UBXN11-213ENST00000472155 CARD11Q9BXL7 1154 aa20.84■□□□□ 0.93
UBXN11-213ENST00000472155 UHRF1BP1Q6BDS2 1440 aa20.83■□□□□ 0.92
UBXN11-213ENST00000472155 AFAP1Q8N556 730 aa20.82■□□□□ 0.92
UBXN11-213ENST00000472155 MAST1Q9Y2H9 1570 aa20.82■□□□□ 0.92
UBXN11-213ENST00000472155 FAM9BQ8IZU0 186 aa20.82■□□□□ 0.92
UBXN11-213ENST00000472155 POLR1AO95602 1720 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms