RNA–Protein interactions for RNA: ENST00000471603.6

PKD1-207, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,505 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-207ENST00000471603 RIMBP3Q9UFD9 1639 aa19.71■□□□□ 0.75
PKD1-207ENST00000471603 CDK11AQ9UQ88 783 aaPredicted RBP19.71■□□□□ 0.75
PKD1-207ENST00000471603 PLEKHD1A6NEE1 506 aa19.7■□□□□ 0.74
PKD1-207ENST00000471603 NEFLP07196 543 aa19.7■□□□□ 0.74
PKD1-207ENST00000471603 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
PKD1-207ENST00000471603 ZCCHC11Q5TAX3 1644 aaKnown RBP19.7■□□□□ 0.74
PKD1-207ENST00000471603 TROQ12816 1431 aaPredicted RBP19.68■□□□□ 0.74
PKD1-207ENST00000471603 CCNB3Q8WWL7 1395 aa19.68■□□□□ 0.74
PKD1-207ENST00000471603 RRBP1Q9P2E9 1410 aaKnown RBP19.65■□□□□ 0.74
PKD1-207ENST00000471603 FGD6Q6ZV73 1430 aa19.63■□□□□ 0.73
PKD1-207ENST00000471603 KDM5BQ9UGL1 1544 aa19.63■□□□□ 0.73
PKD1-207ENST00000471603 MYOM3Q5VTT5 1437 aa19.63■□□□□ 0.73
PKD1-207ENST00000471603 UHRF1BP1LA0JNW5 1464 aa19.62■□□□□ 0.73
PKD1-207ENST00000471603 ZNF644Q9H582 1327 aaPredicted RBP19.62■□□□□ 0.73
PKD1-207ENST00000471603 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
PKD1-207ENST00000471603 SALL2Q9Y467 1007 aaPredicted RBP19.61■□□□□ 0.73
PKD1-207ENST00000471603 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
PKD1-207ENST00000471603 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
PKD1-207ENST00000471603 TTC37Q6PGP7 1564 aa19.56■□□□□ 0.72
PKD1-207ENST00000471603 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
PKD1-207ENST00000471603 NPM1P06748 294 aaKnown RBP eCLIP19.54■□□□□ 0.72
PKD1-207ENST00000471603 ASXL2Q76L83 1435 aa19.54■□□□□ 0.72
PKD1-207ENST00000471603 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
PKD1-207ENST00000471603 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
PKD1-207ENST00000471603 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
PKD1-207ENST00000471603 ABCC10Q5T3U5 1492 aa19.53■□□□□ 0.72
PKD1-207ENST00000471603 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.72
PKD1-207ENST00000471603 CHIC2Q9UKJ5 165 aa19.51■□□□□ 0.71
PKD1-207ENST00000471603 WDR7Q9Y4E6 1490 aa19.5■□□□□ 0.71
PKD1-207ENST00000471603 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
PKD1-207ENST00000471603 ITSN2Q9NZM3 1697 aa19.46■□□□□ 0.71
PKD1-207ENST00000471603 CDC42BPBQ9Y5S2 1711 aa19.46■□□□□ 0.71
PKD1-207ENST00000471603 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
PKD1-207ENST00000471603 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
PKD1-207ENST00000471603 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
PKD1-207ENST00000471603 MYO5CQ9NQX4 1742 aa19.42■□□□□ 0.7
PKD1-207ENST00000471603 PREX2Q70Z35 1606 aa19.41■□□□□ 0.7
PKD1-207ENST00000471603 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
PKD1-207ENST00000471603 HNRNPMP52272 730 aaKnown RBP eCLIP19.41■□□□□ 0.7
PKD1-207ENST00000471603 RRP7BPQ9NSQ0 103 aa19.4■□□□□ 0.7
PKD1-207ENST00000471603 SAMD9LQ8IVG5 1584 aa19.38■□□□□ 0.69
PKD1-207ENST00000471603 CCDC136Q96JN2 1154 aa19.38■□□□□ 0.69
PKD1-207ENST00000471603 NOP58Q9Y2X3 529 aaKnown RBP19.36■□□□□ 0.69
PKD1-207ENST00000471603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.35■□□□□ 0.69
PKD1-207ENST00000471603 DAPK1P53355 1430 aa19.35■□□□□ 0.69
PKD1-207ENST00000471603 CCER2I3L3R5 266 aa19.35■□□□□ 0.69
PKD1-207ENST00000471603 ABCC5O15440 1437 aa19.35■□□□□ 0.69
PKD1-207ENST00000471603 RAB3GAP2Q9H2M9 1393 aa19.34■□□□□ 0.69
PKD1-207ENST00000471603 SYCP2Q9BX26 1530 aa19.34■□□□□ 0.69
PKD1-207ENST00000471603 ABCA9Q8IUA7 1624 aa19.33■□□□□ 0.69
PKD1-207ENST00000471603 PLCH2O75038 1416 aa19.33■□□□□ 0.68
PKD1-207ENST00000471603 DNMT1P26358 1616 aaKnown RBP19.33■□□□□ 0.68
PKD1-207ENST00000471603 MAPKBP1O60336 1514 aa19.31■□□□□ 0.68
PKD1-207ENST00000471603 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
PKD1-207ENST00000471603 FAM69CQ0P6D2 419 aa19.29■□□□□ 0.68
PKD1-207ENST00000471603 FANCAO15360 1455 aa19.29■□□□□ 0.68
PKD1-207ENST00000471603 EFCAB2Q5VUJ9 269 aa19.28■□□□□ 0.68
PKD1-207ENST00000471603 CD109Q6YHK3 1445 aa19.28■□□□□ 0.68
PKD1-207ENST00000471603 SETD5Q9C0A6 1442 aa19.28■□□□□ 0.68
PKD1-207ENST00000471603 TSPOAP1O95153 1857 aa19.27■□□□□ 0.68
PKD1-207ENST00000471603 KDM6BO15054 1643 aa19.27■□□□□ 0.68
PKD1-207ENST00000471603 MBD5Q9P267 1494 aa19.27■□□□□ 0.68
PKD1-207ENST00000471603 IL27Q8NEV9 243 aa19.26■□□□□ 0.67
PKD1-207ENST00000471603 NAIPQ13075 1403 aa19.26■□□□□ 0.67
PKD1-207ENST00000471603 CROCC2H7BZ55 1655 aa19.25■□□□□ 0.67
PKD1-207ENST00000471603 AFAP1Q8N556 730 aa19.25■□□□□ 0.67
PKD1-207ENST00000471603 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
PKD1-207ENST00000471603 NBR1Q14596 966 aa19.24■□□□□ 0.67
PKD1-207ENST00000471603 RTL5Q5HYW3 569 aaPredicted RBP19.23■□□□□ 0.67
PKD1-207ENST00000471603 HFM1A2PYH4 1435 aa19.23■□□□□ 0.67
PKD1-207ENST00000471603 TRAPPC8Q9Y2L5 1435 aa19.23■□□□□ 0.67
PKD1-207ENST00000471603 DIP2BQ9P265 1576 aa19.23■□□□□ 0.67
PKD1-207ENST00000471603 C9orf84Q5VXU9 1444 aa19.22■□□□□ 0.67
PKD1-207ENST00000471603 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
PKD1-207ENST00000471603 ABCC1P33527 1531 aa19.22■□□□□ 0.67
PKD1-207ENST00000471603 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
PKD1-207ENST00000471603 TSPY4P0CV99 314 aa19.21■□□□□ 0.67
PKD1-207ENST00000471603 TSPY10P0CW01 314 aa19.21■□□□□ 0.67
PKD1-207ENST00000471603 DDX10Q13206 875 aaKnown RBP19.21■□□□□ 0.67
PKD1-207ENST00000471603 ADGRL1O94910 1474 aa19.21■□□□□ 0.66
PKD1-207ENST00000471603 CCDC141Q6ZP82 1450 aa19.21■□□□□ 0.66
PKD1-207ENST00000471603 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
PKD1-207ENST00000471603 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.19■□□□□ 0.66
PKD1-207ENST00000471603 C11orf95C9JLR9 678 aaPredicted RBP19.19■□□□□ 0.66
PKD1-207ENST00000471603 PPP4R2Q9NY27 417 aa19.19■□□□□ 0.66
PKD1-207ENST00000471603 SCAPERQ9BY12 1400 aa19.18■□□□□ 0.66
PKD1-207ENST00000471603 NCOA1Q15788 1441 aa19.17■□□□□ 0.66
PKD1-207ENST00000471603 GCC2Q8IWJ2 1684 aa19.17■□□□□ 0.66
PKD1-207ENST00000471603 EIF5BO60841 1220 aaKnown RBP19.17■□□□□ 0.66
PKD1-207ENST00000471603 MAP3K4Q9Y6R4 1608 aa19.17■□□□□ 0.66
PKD1-207ENST00000471603 ARHGEF5Q12774 1597 aa19.17■□□□□ 0.66
PKD1-207ENST00000471603 KIF13AQ9H1H9 1805 aa19.17■□□□□ 0.66
PKD1-207ENST00000471603 ADGBQ8N7X0 1667 aa19.16■□□□□ 0.66
PKD1-207ENST00000471603 PAK3O75914 559 aaPredicted RBP19.16■□□□□ 0.66
PKD1-207ENST00000471603 ARAP3Q8WWN8 1544 aa19.15■□□□□ 0.66
PKD1-207ENST00000471603 WASHC2AQ641Q2 1341 aa19.15■□□□□ 0.66
PKD1-207ENST00000471603 ANP32CO43423 234 aa19.15■□□□□ 0.66
PKD1-207ENST00000471603 RAPGEF3O95398 923 aa19.15■□□□□ 0.66
PKD1-207ENST00000471603 KIAA1107Q9UPP5 1409 aa19.14■□□□□ 0.65
PKD1-207ENST00000471603 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms