RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 ABCC5O15440 1437 aa38.54■■■■□ 3.76
U2AF1-208ENST00000471250 CDC42BPBQ9Y5S2 1711 aa38.53■■■■□ 3.76
U2AF1-208ENST00000471250 AKNAQ7Z591 1439 aa38.52■■■■□ 3.76
U2AF1-208ENST00000471250 KCNH8Q96L42 1107 aa38.5■■■■□ 3.75
U2AF1-208ENST00000471250 ZNF777Q9ULD5 760 aaPredicted RBP38.5■■■■□ 3.75
U2AF1-208ENST00000471250 NAIPQ13075 1403 aa38.5■■■■□ 3.75
U2AF1-208ENST00000471250 WDR7Q9Y4E6 1490 aa38.49■■■■□ 3.75
U2AF1-208ENST00000471250 MYO5CQ9NQX4 1742 aa38.48■■■■□ 3.75
U2AF1-208ENST00000471250 GCC2Q8IWJ2 1684 aa38.46■■■■□ 3.75
U2AF1-208ENST00000471250 CHIC2Q9UKJ5 165 aa38.45■■■■□ 3.75
U2AF1-208ENST00000471250 CLSPNQ9HAW4 1339 aa38.45■■■■□ 3.75
U2AF1-208ENST00000471250 ROCK1Q13464 1354 aa38.44■■■■□ 3.74
U2AF1-208ENST00000471250 CROCC2H7BZ55 1655 aa38.42■■■■□ 3.74
U2AF1-208ENST00000471250 RIMBP3CA6NJZ7 1639 aa38.4■■■■□ 3.74
U2AF1-208ENST00000471250 RIMBP3BA6NNM3 1639 aa38.4■■■■□ 3.74
U2AF1-208ENST00000471250 RIMBP3Q9UFD9 1639 aa38.4■■■■□ 3.74
U2AF1-208ENST00000471250 NPM1P06748 294 aaKnown RBP eCLIP38.4■■■■□ 3.74
U2AF1-208ENST00000471250 SAMD9LQ8IVG5 1584 aa38.4■■■■□ 3.74
U2AF1-208ENST00000471250 ASXL2Q76L83 1435 aa38.39■■■■□ 3.74
U2AF1-208ENST00000471250 ARHGAP5Q13017 1502 aa38.38■■■■□ 3.73
U2AF1-208ENST00000471250 RRP7BPQ9NSQ0 103 aa38.38■■■■□ 3.73
U2AF1-208ENST00000471250 PLCH2O75038 1416 aa38.36■■■■□ 3.73
U2AF1-208ENST00000471250 ARHGEF5Q12774 1597 aa38.35■■■■□ 3.73
U2AF1-208ENST00000471250 ADGBQ8N7X0 1667 aa38.33■■■■□ 3.73
U2AF1-208ENST00000471250 MBD5Q9P267 1494 aa38.31■■■■□ 3.72
U2AF1-208ENST00000471250 ADGRL2O95490 1459 aa38.3■■■■□ 3.72
U2AF1-208ENST00000471250 SHANK2Q9UPX8 1470 aa38.3■■■■□ 3.72
U2AF1-208ENST00000471250 ABCA9Q8IUA7 1624 aa38.3■■■■□ 3.72
U2AF1-208ENST00000471250 ARAP3Q8WWN8 1544 aa38.29■■■■□ 3.72
U2AF1-208ENST00000471250 PLEKHH2Q8IVE3 1493 aa38.26■■■■□ 3.72
U2AF1-208ENST00000471250 HNRNPMP52272 730 aaKnown RBP eCLIP38.24■■■■□ 3.71
U2AF1-208ENST00000471250 RSPH4AQ5TD94 716 aa38.24■■■■□ 3.71
U2AF1-208ENST00000471250 NCOA1Q15788 1441 aa38.23■■■■□ 3.71
U2AF1-208ENST00000471250 KIAA1107Q9UPP5 1409 aa38.23■■■■□ 3.71
U2AF1-208ENST00000471250 MAPKBP1O60336 1514 aa38.22■■■■□ 3.71
U2AF1-208ENST00000471250 EFCAB2Q5VUJ9 269 aa38.22■■■■□ 3.71
U2AF1-208ENST00000471250 KDM6BO15054 1643 aa38.22■■■■□ 3.71
U2AF1-208ENST00000471250 CCDC141Q6ZP82 1450 aa38.22■■■■□ 3.71
U2AF1-208ENST00000471250 CYB5RLQ6IPT4 315 aa38.2■■■■□ 3.71
U2AF1-208ENST00000471250 SYCP2Q9BX26 1530 aa38.2■■■■□ 3.71
U2AF1-208ENST00000471250 C9orf84Q5VXU9 1444 aa38.19■■■■□ 3.7
U2AF1-208ENST00000471250 ANKRD30AQ9BXX3 1397 aa38.19■■■■□ 3.7
U2AF1-208ENST00000471250 TSPY4P0CV99 314 aa38.17■■■■□ 3.7
U2AF1-208ENST00000471250 TSPY10P0CW01 314 aa38.17■■■■□ 3.7
U2AF1-208ENST00000471250 ACIN1Q9UKV3 1341 aaKnown RBP38.15■■■■□ 3.7
U2AF1-208ENST00000471250 ABCC1P33527 1531 aa38.11■■■■□ 3.69
U2AF1-208ENST00000471250 MAST1Q9Y2H9 1570 aa38.11■■■■□ 3.69
U2AF1-208ENST00000471250 ARHGEF12Q9NZN5 1544 aa38.1■■■■□ 3.69
U2AF1-208ENST00000471250 FANCAO15360 1455 aa38.03■■■■□ 3.68
U2AF1-208ENST00000471250 TRIM52Q96A61 297 aa38■■■■□ 3.67
U2AF1-208ENST00000471250 ANKRD50Q9ULJ7 1429 aa37.98■■■■□ 3.67
U2AF1-208ENST00000471250 KIF15Q9NS87 1388 aa37.96■■■■□ 3.67
U2AF1-208ENST00000471250 CD109Q6YHK3 1445 aa37.95■■■■□ 3.67
U2AF1-208ENST00000471250 TRAPPC8Q9Y2L5 1435 aa37.94■■■■□ 3.66
U2AF1-208ENST00000471250 PLXNC1O60486 1568 aa37.93■■■■□ 3.66
U2AF1-208ENST00000471250 DENND4BO75064 1496 aaPredicted RBP37.89■■■■□ 3.66
U2AF1-208ENST00000471250 CFAP74Q9C0B2 1584 aa37.89■■■■□ 3.66
U2AF1-208ENST00000471250 MPHOSPH9Q99550 1183 aa37.88■■■■□ 3.66
U2AF1-208ENST00000471250 ADGRL1O94910 1474 aa37.87■■■■□ 3.65
U2AF1-208ENST00000471250 GLI2P10070 1586 aa37.85■■■■□ 3.65
U2AF1-208ENST00000471250 SIN3AQ96ST3 1273 aa37.83■■■■□ 3.65
U2AF1-208ENST00000471250 RTEL1-TNFRSF6BF6WH68 1400 aa37.83■■■■□ 3.65
U2AF1-208ENST00000471250 SCAPERQ9BY12 1400 aa37.83■■■■□ 3.65
U2AF1-208ENST00000471250 MAP3K4Q9Y6R4 1608 aa37.79■■■■□ 3.64
U2AF1-208ENST00000471250 PZPP20742 1482 aa37.79■■■■□ 3.64
U2AF1-208ENST00000471250 AFAP1Q8N556 730 aa37.78■■■■□ 3.64
U2AF1-208ENST00000471250 SPAG9O60271 1321 aaKnown RBP37.77■■■■□ 3.64
U2AF1-208ENST00000471250 DUOX2Q9NRD8 1548 aa37.77■■■■□ 3.64
U2AF1-208ENST00000471250 ZFYVE16Q7Z3T8 1539 aa37.75■■■■□ 3.63
U2AF1-208ENST00000471250 NEUROD1Q13562 356 aa37.75■■■■□ 3.63
U2AF1-208ENST00000471250 TIMELESSQ9UNS1 1208 aa37.75■■■■□ 3.63
U2AF1-208ENST00000471250 KDM5DQ9BY66 1539 aa37.75■■■■□ 3.63
U2AF1-208ENST00000471250 NEO1Q92859 1461 aa37.73■■■■□ 3.63
U2AF1-208ENST00000471250 SLC4A1APQ9BWU0 796 aaKnown RBP37.72■■■■□ 3.63
U2AF1-208ENST00000471250 DIP2BQ9P265 1576 aa37.72■■■■□ 3.63
U2AF1-208ENST00000471250 INO80Q9ULG1 1556 aaPredicted RBP37.72■■■■□ 3.63
U2AF1-208ENST00000471250 ERBINQ96RT1 1412 aa37.69■■■■□ 3.62
U2AF1-208ENST00000471250 ATP7AQ04656 1500 aa37.68■■■■□ 3.62
U2AF1-208ENST00000471250 NUP155O75694 1391 aa37.66■■■■□ 3.62
U2AF1-208ENST00000471250 ZNF518AQ6AHZ1 1483 aa37.66■■■■□ 3.62
U2AF1-208ENST00000471250 UNC13BO14795 1591 aa37.65■■■■□ 3.62
U2AF1-208ENST00000471250 FAM69CQ0P6D2 419 aa37.62■■■■□ 3.61
U2AF1-208ENST00000471250 POGZQ7Z3K3 1410 aa37.62■■■■□ 3.61
U2AF1-208ENST00000471250 ANKRD30BQ9BXX2 1392 aa37.61■■■■□ 3.61
U2AF1-208ENST00000471250 FOXD1Q16676 465 aa37.6■■■■□ 3.61
U2AF1-208ENST00000471250 KDM5CP41229 1560 aa37.59■■■■□ 3.61
U2AF1-208ENST00000471250 KIDINS220Q9ULH0 1771 aa37.56■■■■□ 3.6
U2AF1-208ENST00000471250 TONSLQ96HA7 1378 aa37.54■■■■□ 3.6
U2AF1-208ENST00000471250 PKD2Q13563 968 aa37.53■■■■□ 3.6
U2AF1-208ENST00000471250 MAGI2Q86UL8 1455 aa37.53■■■■□ 3.6
U2AF1-208ENST00000471250 FAM135AQ9P2D6 1515 aa37.52■■■■□ 3.6
U2AF1-208ENST00000471250 MLH3Q9UHC1 1453 aa37.5■■■■□ 3.59
U2AF1-208ENST00000471250 IQGAP3Q86VI3 1631 aa37.49■■■■□ 3.59
U2AF1-208ENST00000471250 MYT1LQ9UL68 1186 aa37.49■■■■□ 3.59
U2AF1-208ENST00000471250 PPRC1Q5VV67 1664 aaKnown RBP37.47■■■■□ 3.59
U2AF1-208ENST00000471250 PPP1R15AO75807 674 aaPredicted RBP37.47■■■■□ 3.59
U2AF1-208ENST00000471250 HECW2Q9P2P5 1572 aa37.47■■■■□ 3.59
U2AF1-208ENST00000471250 DHX29Q7Z478 1369 aaKnown RBP37.46■■■■□ 3.59
U2AF1-208ENST00000471250 RPRD2Q5VT52 1461 aaKnown RBP37.45■■■■□ 3.59
U2AF1-208ENST00000471250 ZNF316A6NFI3 1004 aaPredicted RBP37.45■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms