RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 PLEKHD1A6NEE1 506 aa21.84■■□□□ 1.09
LAMP1-202ENST00000471046 MLECQ14165 292 aa21.84■■□□□ 1.09
LAMP1-202ENST00000471046 SETD1BQ9UPS6 1966 aaKnown RBP21.84■■□□□ 1.09
LAMP1-202ENST00000471046 ILDR2Q71H61 639 aa21.83■■□□□ 1.09
LAMP1-202ENST00000471046 SPATA31D1Q6ZQQ2 1576 aa21.82■■□□□ 1.08
LAMP1-202ENST00000471046 C9orf84Q5VXU9 1444 aa21.81■■□□□ 1.08
LAMP1-202ENST00000471046 C3P01024 1663 aa21.81■■□□□ 1.08
LAMP1-202ENST00000471046 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
LAMP1-202ENST00000471046 ATP10AO60312 1499 aa21.8■■□□□ 1.08
LAMP1-202ENST00000471046 DISP3Q9P2K9 1392 aa21.8■■□□□ 1.08
LAMP1-202ENST00000471046 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
LAMP1-202ENST00000471046 PLCH2O75038 1416 aa21.79■■□□□ 1.08
LAMP1-202ENST00000471046 KIF14Q15058 1648 aa21.78■■□□□ 1.08
LAMP1-202ENST00000471046 RANGAP1P46060 587 aaPredicted RBP21.78■■□□□ 1.08
LAMP1-202ENST00000471046 KDM5CP41229 1560 aa21.77■■□□□ 1.08
LAMP1-202ENST00000471046 DIP2CQ9Y2E4 1556 aa21.76■■□□□ 1.07
LAMP1-202ENST00000471046 LRRIQ1Q96JM4 1722 aa21.75■■□□□ 1.07
LAMP1-202ENST00000471046 ABCA6Q8N139 1617 aa21.74■■□□□ 1.07
LAMP1-202ENST00000471046 SOCS7O14512 581 aa21.73■■□□□ 1.07
LAMP1-202ENST00000471046 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
LAMP1-202ENST00000471046 REREQ9P2R6 1566 aa21.72■■□□□ 1.07
LAMP1-202ENST00000471046 CDC42BPBQ9Y5S2 1711 aa21.72■■□□□ 1.07
LAMP1-202ENST00000471046 UHRF1BP1Q6BDS2 1440 aa21.72■■□□□ 1.07
LAMP1-202ENST00000471046 ZNF518AQ6AHZ1 1483 aa21.7■■□□□ 1.06
LAMP1-202ENST00000471046 LTBP4Q8N2S1 1624 aa21.69■■□□□ 1.06
LAMP1-202ENST00000471046 EEA1Q15075 1411 aa21.69■■□□□ 1.06
LAMP1-202ENST00000471046 ITSN2Q9NZM3 1697 aa21.66■■□□□ 1.06
LAMP1-202ENST00000471046 PTPRTO14522 1441 aa21.65■■□□□ 1.06
LAMP1-202ENST00000471046 ARHGAP5Q13017 1502 aa21.65■■□□□ 1.06
LAMP1-202ENST00000471046 DMRT2Q9Y5R5 561 aa21.63■■□□□ 1.05
LAMP1-202ENST00000471046 PREX2Q70Z35 1606 aa21.62■■□□□ 1.05
LAMP1-202ENST00000471046 KIDINS220Q9ULH0 1771 aa21.61■■□□□ 1.05
LAMP1-202ENST00000471046 IQSEC2Q5JU85 1478 aa21.61■■□□□ 1.05
LAMP1-202ENST00000471046 EFCAB2Q5VUJ9 269 aa21.6■■□□□ 1.05
LAMP1-202ENST00000471046 AGLP35573 1532 aa21.6■■□□□ 1.05
LAMP1-202ENST00000471046 MROH2AA6NES4 1674 aa21.6■■□□□ 1.05
LAMP1-202ENST00000471046 ABCC1P33527 1531 aa21.59■■□□□ 1.05
LAMP1-202ENST00000471046 CDC42BPAQ5VT25 1732 aa21.57■■□□□ 1.04
LAMP1-202ENST00000471046 SUPT6HQ7KZ85 1726 aaKnown RBP21.57■■□□□ 1.04
LAMP1-202ENST00000471046 MLH3Q9UHC1 1453 aa21.57■■□□□ 1.04
LAMP1-202ENST00000471046 TROQ12816 1431 aaPredicted RBP21.56■■□□□ 1.04
LAMP1-202ENST00000471046 NCOA1Q15788 1441 aa21.56■■□□□ 1.04
LAMP1-202ENST00000471046 AFAP1Q8N556 730 aa21.55■■□□□ 1.04
LAMP1-202ENST00000471046 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
LAMP1-202ENST00000471046 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
LAMP1-202ENST00000471046 ZNF142P52746 1687 aaPredicted RBP21.53■■□□□ 1.04
LAMP1-202ENST00000471046 CAMSAP1Q5T5Y3 1602 aa21.53■■□□□ 1.04
LAMP1-202ENST00000471046 TRAPPC8Q9Y2L5 1435 aa21.52■■□□□ 1.04
LAMP1-202ENST00000471046 CLIP1P30622 1438 aa21.49■■□□□ 1.03
LAMP1-202ENST00000471046 MYO3AQ8NEV4 1616 aa21.49■■□□□ 1.03
LAMP1-202ENST00000471046 CLTCQ00610 1675 aaKnown RBP21.48■■□□□ 1.03
LAMP1-202ENST00000471046 ATP1B4Q9UN42 357 aaPredicted RBP21.47■■□□□ 1.03
LAMP1-202ENST00000471046 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
LAMP1-202ENST00000471046 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
LAMP1-202ENST00000471046 CDK11AQ9UQ88 783 aaPredicted RBP21.45■■□□□ 1.02
LAMP1-202ENST00000471046 SAMD9LQ8IVG5 1584 aa21.44■■□□□ 1.02
LAMP1-202ENST00000471046 NPATQ14207 1427 aa21.42■■□□□ 1.02
LAMP1-202ENST00000471046 CEP170BQ9Y4F5 1589 aaPredicted RBP21.4■■□□□ 1.02
LAMP1-202ENST00000471046 PLXNC1O60486 1568 aa21.39■■□□□ 1.01
LAMP1-202ENST00000471046 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
LAMP1-202ENST00000471046 INO80Q9ULG1 1556 aaPredicted RBP21.38■■□□□ 1.01
LAMP1-202ENST00000471046 SYCP2Q9BX26 1530 aa21.38■■□□□ 1.01
LAMP1-202ENST00000471046 POLR1AO95602 1720 aaPredicted RBP21.37■■□□□ 1.01
LAMP1-202ENST00000471046 ZNF335Q9H4Z2 1342 aaPredicted RBP21.36■■□□□ 1.01
LAMP1-202ENST00000471046 PLA2R1Q13018 1463 aa21.36■■□□□ 1.01
LAMP1-202ENST00000471046 TCOF1Q13428 1488 aaKnown RBP21.35■■□□□ 1.01
LAMP1-202ENST00000471046 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
LAMP1-202ENST00000471046 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
LAMP1-202ENST00000471046 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
LAMP1-202ENST00000471046 NCKAP5LQ9HCH0 1330 aa21.33■■□□□ 1.01
LAMP1-202ENST00000471046 MED1Q15648 1581 aaPredicted RBP21.33■■□□□ 1.01
LAMP1-202ENST00000471046 ZMYM3Q14202 1370 aa21.32■■□□□ 1
LAMP1-202ENST00000471046 UBTFP17480 764 aaKnown RBP21.31■■□□□ 1
LAMP1-202ENST00000471046 UBAP1LF5GYI3 381 aa21.3■■□□□ 1
LAMP1-202ENST00000471046 ADGBQ8N7X0 1667 aa21.3■■□□□ 1
LAMP1-202ENST00000471046 PTPRKQ15262 1439 aa21.29■■□□□ 1
LAMP1-202ENST00000471046 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
LAMP1-202ENST00000471046 DNMT1P26358 1616 aaKnown RBP21.28■■□□□ 1
LAMP1-202ENST00000471046 NEURL4Q96JN8 1562 aa21.26■□□□□ 0.99
LAMP1-202ENST00000471046 A2MP01023 1474 aa21.24■□□□□ 0.99
LAMP1-202ENST00000471046 GPATCH8Q9UKJ3 1502 aaKnown RBP21.24■□□□□ 0.99
LAMP1-202ENST00000471046 FYCO1Q9BQS8 1478 aa21.22■□□□□ 0.99
LAMP1-202ENST00000471046 PKD2Q13563 968 aa21.22■□□□□ 0.99
LAMP1-202ENST00000471046 SPAG9O60271 1321 aaKnown RBP21.21■□□□□ 0.99
LAMP1-202ENST00000471046 A2ML1A8K2U0 1454 aa21.2■□□□□ 0.98
LAMP1-202ENST00000471046 CPS1P31327 1500 aa21.18■□□□□ 0.98
LAMP1-202ENST00000471046 ALKQ9UM73 1620 aa21.18■□□□□ 0.98
LAMP1-202ENST00000471046 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
LAMP1-202ENST00000471046 PPP6R1Q9UPN7 881 aa21.17■□□□□ 0.98
LAMP1-202ENST00000471046 PLEKHH2Q8IVE3 1493 aa21.16■□□□□ 0.98
LAMP1-202ENST00000471046 KIAA1107Q9UPP5 1409 aa21.16■□□□□ 0.98
LAMP1-202ENST00000471046 HNRNPMP52272 730 aaKnown RBP eCLIP21.16■□□□□ 0.98
LAMP1-202ENST00000471046 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.98
LAMP1-202ENST00000471046 HSPA1LP34931 641 aa21.14■□□□□ 0.97
LAMP1-202ENST00000471046 STRCP1A6NGW2 1772 aa21.13■□□□□ 0.97
LAMP1-202ENST00000471046 TIAM1Q13009 1591 aa21.12■□□□□ 0.97
LAMP1-202ENST00000471046 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
LAMP1-202ENST00000471046 GGT6Q6P531 493 aa21.1■□□□□ 0.97
LAMP1-202ENST00000471046 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
LAMP1-202ENST00000471046 DEPDC5O75140 1603 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms