RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 CNTLNQ9NXG0 1405 aa15.52■□□□□ 0.07
SRGAP3-204ENST00000470951 NPM2Q86SE8 214 aaKnown RBP15.52■□□□□ 0.07
SRGAP3-204ENST00000470951 HECW1Q76N89 1606 aa15.52■□□□□ 0.07
SRGAP3-204ENST00000470951 PTPRKQ15262 1439 aa15.51■□□□□ 0.07
SRGAP3-204ENST00000470951 MYOM3Q5VTT5 1437 aa15.51■□□□□ 0.07
SRGAP3-204ENST00000470951 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
SRGAP3-204ENST00000470951 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
SRGAP3-204ENST00000470951 ATP1B4Q9UN42 357 aaPredicted RBP15.51■□□□□ 0.07
SRGAP3-204ENST00000470951 MTUS2Q5JR59 1369 aa15.5■□□□□ 0.07
SRGAP3-204ENST00000470951 SUPT6HQ7KZ85 1726 aaKnown RBP15.5■□□□□ 0.07
SRGAP3-204ENST00000470951 WASHC2AQ641Q2 1341 aa15.5■□□□□ 0.07
SRGAP3-204ENST00000470951 GCC2Q8IWJ2 1684 aa15.5■□□□□ 0.07
SRGAP3-204ENST00000470951 P3H3Q8IVL6 736 aa15.49■□□□□ 0.07
SRGAP3-204ENST00000470951 FBLN2P98095 1184 aa15.48■□□□□ 0.07
SRGAP3-204ENST00000470951 ZBED9Q6R2W3 1325 aa15.48■□□□□ 0.07
SRGAP3-204ENST00000470951 DEKP35659 375 aaKnown RBP15.48■□□□□ 0.07
SRGAP3-204ENST00000470951 AKNAQ7Z591 1439 aa15.48■□□□□ 0.07
SRGAP3-204ENST00000470951 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
SRGAP3-204ENST00000470951 HSPA5P11021 654 aaKnown RBP15.47■□□□□ 0.07
SRGAP3-204ENST00000470951 EIF4G2P78344 907 aaKnown RBP eCLIP15.47■□□□□ 0.07
SRGAP3-204ENST00000470951 IRX6P78412 446 aaPredicted RBP15.47■□□□□ 0.07
SRGAP3-204ENST00000470951 POLR1AO95602 1720 aaPredicted RBP15.47■□□□□ 0.07
SRGAP3-204ENST00000470951 SAMD9Q5K651 1589 aa15.46■□□□□ 0.07
SRGAP3-204ENST00000470951 LRRIQ1Q96JM4 1722 aa15.45■□□□□ 0.06
SRGAP3-204ENST00000470951 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
SRGAP3-204ENST00000470951 NCOA1Q15788 1441 aa15.44■□□□□ 0.06
SRGAP3-204ENST00000470951 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
SRGAP3-204ENST00000470951 TCOF1Q13428 1488 aaKnown RBP15.42■□□□□ 0.06
SRGAP3-204ENST00000470951 UGGT2Q9NYU1 1516 aa15.42■□□□□ 0.06
SRGAP3-204ENST00000470951 PRKRIP1Q9H875 184 aaPredicted RBP15.42■□□□□ 0.06
SRGAP3-204ENST00000470951 MAGI1Q96QZ7 1491 aaPredicted RBP15.41■□□□□ 0.06
SRGAP3-204ENST00000470951 TMEM132AQ24JP5 1023 aa15.41■□□□□ 0.06
SRGAP3-204ENST00000470951 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
SRGAP3-204ENST00000470951 CCDC7Q96M83 1385 aa15.41■□□□□ 0.06
SRGAP3-204ENST00000470951 ADAMTS12P58397 1594 aa15.4■□□□□ 0.06
SRGAP3-204ENST00000470951 ZBTB22O15209 634 aa15.39■□□□□ 0.05
SRGAP3-204ENST00000470951 DENND4BO75064 1496 aaPredicted RBP15.39■□□□□ 0.05
SRGAP3-204ENST00000470951 NOP58Q9Y2X3 529 aaKnown RBP15.38■□□□□ 0.05
SRGAP3-204ENST00000470951 CHD1O14646 1710 aa15.38■□□□□ 0.05
SRGAP3-204ENST00000470951 SYNJ2O15056 1496 aa15.38■□□□□ 0.05
SRGAP3-204ENST00000470951 MRS2Q9HD23 443 aa15.37■□□□□ 0.05
SRGAP3-204ENST00000470951 SMG6Q86US8 1419 aaKnown RBP15.36■□□□□ 0.05
SRGAP3-204ENST00000470951 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
SRGAP3-204ENST00000470951 C14orf37Q86TY3 774 aa15.35■□□□□ 0.05
SRGAP3-204ENST00000470951 CCDC184Q52MB2 194 aa15.34■□□□□ 0.05
SRGAP3-204ENST00000470951 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.05
SRGAP3-204ENST00000470951 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
SRGAP3-204ENST00000470951 RNF123Q5XPI4 1314 aa15.32■□□□□ 0.04
SRGAP3-204ENST00000470951 MIA2Q96PC5 1412 aa15.32■□□□□ 0.04
SRGAP3-204ENST00000470951 RPRD2Q5VT52 1461 aaKnown RBP15.31■□□□□ 0.04
SRGAP3-204ENST00000470951 SPATA31E1Q6ZUB1 1445 aa15.31■□□□□ 0.04
SRGAP3-204ENST00000470951 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
SRGAP3-204ENST00000470951 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
SRGAP3-204ENST00000470951 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
SRGAP3-204ENST00000470951 KDM6BO15054 1643 aa15.29■□□□□ 0.04
SRGAP3-204ENST00000470951 TEX14Q8IWB6 1497 aa15.29■□□□□ 0.04
SRGAP3-204ENST00000470951 C11orf95C9JLR9 678 aaPredicted RBP15.28■□□□□ 0.04
SRGAP3-204ENST00000470951 RRP7BPQ9NSQ0 103 aa15.28■□□□□ 0.04
SRGAP3-204ENST00000470951 MAGI3Q5TCQ9 1506 aa15.28■□□□□ 0.04
SRGAP3-204ENST00000470951 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
SRGAP3-204ENST00000470951 IPO9Q96P70 1041 aaKnown RBP15.27■□□□□ 0.03
SRGAP3-204ENST00000470951 ANKRD30BQ9BXX2 1392 aa15.27■□□□□ 0.03
SRGAP3-204ENST00000470951 NUDCQ9Y266 331 aa15.26■□□□□ 0.03
SRGAP3-204ENST00000470951 KIF7Q2M1P5 1343 aa15.26■□□□□ 0.03
SRGAP3-204ENST00000470951 ROCK1Q13464 1354 aa15.26■□□□□ 0.03
SRGAP3-204ENST00000470951 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
SRGAP3-204ENST00000470951 ARID4BQ4LE39 1312 aaPredicted RBP15.23■□□□□ 0.03
SRGAP3-204ENST00000470951 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
SRGAP3-204ENST00000470951 NUP160Q12769 1436 aa15.22■□□□□ 0.03
SRGAP3-204ENST00000470951 RTL5Q5HYW3 569 aaPredicted RBP15.21■□□□□ 0.03
SRGAP3-204ENST00000470951 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
SRGAP3-204ENST00000470951 NBPF8Q3BBV2 869 aa15.21■□□□□ 0.02
SRGAP3-204ENST00000470951 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.21■□□□□ 0.02
SRGAP3-204ENST00000470951 DHX29Q7Z478 1369 aaKnown RBP15.2■□□□□ 0.02
SRGAP3-204ENST00000470951 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
SRGAP3-204ENST00000470951 EPRSP07814 1512 aaKnown RBP15.2■□□□□ 0.02
SRGAP3-204ENST00000470951 VSIG10Q8N0Z9 540 aa15.2■□□□□ 0.02
SRGAP3-204ENST00000470951 NBR1Q14596 966 aa15.19■□□□□ 0.02
SRGAP3-204ENST00000470951 DNMT1P26358 1616 aaKnown RBP15.19■□□□□ 0.02
SRGAP3-204ENST00000470951 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
SRGAP3-204ENST00000470951 ADRA2BP18089 450 aa15.18■□□□□ 0.02
SRGAP3-204ENST00000470951 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
SRGAP3-204ENST00000470951 DAPK1P53355 1430 aa15.17■□□□□ 0.02
SRGAP3-204ENST00000470951 ROCK2O75116 1388 aaKnown RBP15.16■□□□□ 0.02
SRGAP3-204ENST00000470951 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
SRGAP3-204ENST00000470951 KIF14Q15058 1648 aa15.15■□□□□ 0.02
SRGAP3-204ENST00000470951 KIAA0586Q9BVV6 1533 aa15.15■□□□□ 0.02
SRGAP3-204ENST00000470951 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
SRGAP3-204ENST00000470951 JPH4Q96JJ6 628 aa15.14■□□□□ 0.01
SRGAP3-204ENST00000470951 KTN1Q86UP2 1357 aaKnown RBP15.13■□□□□ 0.01
SRGAP3-204ENST00000470951 BCORL1Q5H9F3 1711 aa15.13■□□□□ 0.01
SRGAP3-204ENST00000470951 USP35Q9P2H5 1018 aa15.13■□□□□ 0.01
SRGAP3-204ENST00000470951 IQGAP2Q13576 1575 aa15.12■□□□□ 0.01
SRGAP3-204ENST00000470951 KDM5CP41229 1560 aa15.12■□□□□ 0.01
SRGAP3-204ENST00000470951 FOXD1Q16676 465 aa15.11■□□□□ 0.01
SRGAP3-204ENST00000470951 IL27Q8NEV9 243 aa15.11■□□□□ 0.01
SRGAP3-204ENST00000470951 TCERG1O14776 1098 aaKnown RBP15.11■□□□□ 0.01
SRGAP3-204ENST00000470951 PNISRQ8TF01 805 aaKnown RBP15.11■□□□□ 0.01
SRGAP3-204ENST00000470951 ABCC5O15440 1437 aa15.1■□□□□ 0.01
SRGAP3-204ENST00000470951 USP47Q96K76 1375 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms