RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
CCNL1-212ENST00000470121 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
CCNL1-212ENST00000470121 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
CCNL1-212ENST00000470121 CAMSAP2Q08AD1 1489 aa20.23■□□□□ 0.83
CCNL1-212ENST00000470121 KDM6BO15054 1643 aa20.21■□□□□ 0.83
CCNL1-212ENST00000470121 CDC42BPAQ5VT25 1732 aa20.19■□□□□ 0.82
CCNL1-212ENST00000470121 ABCC2Q92887 1545 aa20.18■□□□□ 0.82
CCNL1-212ENST00000470121 NEUROD1Q13562 356 aa20.17■□□□□ 0.82
CCNL1-212ENST00000470121 DENND4BO75064 1496 aaPredicted RBP20.16■□□□□ 0.82
CCNL1-212ENST00000470121 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
CCNL1-212ENST00000470121 UHRF1BP1LA0JNW5 1464 aa20.13■□□□□ 0.81
CCNL1-212ENST00000470121 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
CCNL1-212ENST00000470121 CROCC2H7BZ55 1655 aa20.11■□□□□ 0.81
CCNL1-212ENST00000470121 NCOA1Q15788 1441 aa20.11■□□□□ 0.81
CCNL1-212ENST00000470121 ZNF777Q9ULD5 760 aaPredicted RBP20.11■□□□□ 0.81
CCNL1-212ENST00000470121 PPP1R15AO75807 674 aaPredicted RBP20.1■□□□□ 0.81
CCNL1-212ENST00000470121 ADGBQ8N7X0 1667 aa20.09■□□□□ 0.81
CCNL1-212ENST00000470121 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
CCNL1-212ENST00000470121 MPHOSPH9Q99550 1183 aa20.08■□□□□ 0.81
CCNL1-212ENST00000470121 KDM5BQ9UGL1 1544 aa20.06■□□□□ 0.8
CCNL1-212ENST00000470121 PREX2Q70Z35 1606 aa20.06■□□□□ 0.8
CCNL1-212ENST00000470121 SHANK2Q9UPX8 1470 aa20.06■□□□□ 0.8
CCNL1-212ENST00000470121 CDC42BPBQ9Y5S2 1711 aa20.05■□□□□ 0.8
CCNL1-212ENST00000470121 MBD5Q9P267 1494 aa20.04■□□□□ 0.8
CCNL1-212ENST00000470121 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.04■□□□□ 0.82e-6■■□□□ 13.5
CCNL1-212ENST00000470121 ARHGEF5Q12774 1597 aa20.04■□□□□ 0.8
CCNL1-212ENST00000470121 ANKRD30AQ9BXX3 1397 aa20.03■□□□□ 0.8
CCNL1-212ENST00000470121 ZCCHC11Q5TAX3 1644 aaKnown RBP20.02■□□□□ 0.8
CCNL1-212ENST00000470121 SAMD9LQ8IVG5 1584 aa20.02■□□□□ 0.79
CCNL1-212ENST00000470121 TONSLQ96HA7 1378 aa20.01■□□□□ 0.79
CCNL1-212ENST00000470121 TTC37Q6PGP7 1564 aa20.01■□□□□ 0.79
CCNL1-212ENST00000470121 C9orf84Q5VXU9 1444 aa20■□□□□ 0.79
CCNL1-212ENST00000470121 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.797e-11■■■■□ 25.8
CCNL1-212ENST00000470121 RSPH4AQ5TD94 716 aa19.98■□□□□ 0.79
CCNL1-212ENST00000470121 MIER1Q8N108 512 aa19.97■□□□□ 0.79
CCNL1-212ENST00000470121 ANKRD30BQ9BXX2 1392 aa19.97■□□□□ 0.79
CCNL1-212ENST00000470121 PZPP20742 1482 aa19.97■□□□□ 0.79
CCNL1-212ENST00000470121 TSPY4P0CV99 314 aa19.96■□□□□ 0.79
CCNL1-212ENST00000470121 TSPY10P0CW01 314 aa19.96■□□□□ 0.79
CCNL1-212ENST00000470121 ANKRD50Q9ULJ7 1429 aa19.95■□□□□ 0.78
CCNL1-212ENST00000470121 CCDC141Q6ZP82 1450 aa19.94■□□□□ 0.78
CCNL1-212ENST00000470121 MYO5CQ9NQX4 1742 aa19.94■□□□□ 0.78
CCNL1-212ENST00000470121 ARHGAP5Q13017 1502 aa19.93■□□□□ 0.78
CCNL1-212ENST00000470121 FOXD1Q16676 465 aa19.92■□□□□ 0.78
CCNL1-212ENST00000470121 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
CCNL1-212ENST00000470121 PLCH2O75038 1416 aa19.92■□□□□ 0.78
CCNL1-212ENST00000470121 KIAA1107Q9UPP5 1409 aa19.92■□□□□ 0.78
CCNL1-212ENST00000470121 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
CCNL1-212ENST00000470121 KCNH8Q96L42 1107 aa19.92■□□□□ 0.78
CCNL1-212ENST00000470121 MAST1Q9Y2H9 1570 aa19.9■□□□□ 0.78
CCNL1-212ENST00000470121 PLEKHH2Q8IVE3 1493 aa19.9■□□□□ 0.78
CCNL1-212ENST00000470121 SYCP2Q9BX26 1530 aa19.89■□□□□ 0.77
CCNL1-212ENST00000470121 RPRD2Q5VT52 1461 aaKnown RBP19.89■□□□□ 0.77
CCNL1-212ENST00000470121 KIF15Q9NS87 1388 aa19.88■□□□□ 0.77
CCNL1-212ENST00000470121 KDM5DQ9BY66 1539 aa19.86■□□□□ 0.77
CCNL1-212ENST00000470121 ARHGEF12Q9NZN5 1544 aa19.85■□□□□ 0.77
CCNL1-212ENST00000470121 ARAP3Q8WWN8 1544 aa19.84■□□□□ 0.77
CCNL1-212ENST00000470121 EFCAB2Q5VUJ9 269 aa19.84■□□□□ 0.77
CCNL1-212ENST00000470121 WDR7Q9Y4E6 1490 aa19.83■□□□□ 0.77
CCNL1-212ENST00000470121 L3MBTL2Q969R5 705 aa19.83■□□□□ 0.76
CCNL1-212ENST00000470121 PKD2Q13563 968 aa19.81■□□□□ 0.76
CCNL1-212ENST00000470121 NUP155O75694 1391 aa19.81■□□□□ 0.76
CCNL1-212ENST00000470121 TEX14Q8IWB6 1497 aa19.8■□□□□ 0.76
CCNL1-212ENST00000470121 ABCC1P33527 1531 aa19.8■□□□□ 0.76
CCNL1-212ENST00000470121 PLXNC1O60486 1568 aa19.79■□□□□ 0.76
CCNL1-212ENST00000470121 ABCA9Q8IUA7 1624 aa19.76■□□□□ 0.75
CCNL1-212ENST00000470121 HIRIP3Q9BW71 556 aaPredicted RBP19.75■□□□□ 0.75
CCNL1-212ENST00000470121 ASXL2Q76L83 1435 aa19.74■□□□□ 0.75
CCNL1-212ENST00000470121 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
CCNL1-212ENST00000470121 UNC13BO14795 1591 aa19.72■□□□□ 0.75
CCNL1-212ENST00000470121 DUOX2Q9NRD8 1548 aa19.72■□□□□ 0.75
CCNL1-212ENST00000470121 NBPF8Q3BBV2 869 aa19.71■□□□□ 0.75
CCNL1-212ENST00000470121 FAM135AQ9P2D6 1515 aa19.71■□□□□ 0.75
CCNL1-212ENST00000470121 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
CCNL1-212ENST00000470121 RTEL1-TNFRSF6BF6WH68 1400 aa19.69■□□□□ 0.74
CCNL1-212ENST00000470121 CENPBP07199 599 aaPredicted RBP19.69■□□□□ 0.74
CCNL1-212ENST00000470121 ERBINQ96RT1 1412 aa19.68■□□□□ 0.74
CCNL1-212ENST00000470121 FANCAO15360 1455 aa19.67■□□□□ 0.74
CCNL1-212ENST00000470121 HSPA5P11021 654 aaKnown RBP19.67■□□□□ 0.74
CCNL1-212ENST00000470121 MAGI2Q86UL8 1455 aa19.66■□□□□ 0.74
CCNL1-212ENST00000470121 NPM1P06748 294 aaKnown RBP eCLIP19.65■□□□□ 0.74
CCNL1-212ENST00000470121 AFAP1Q8N556 730 aa19.65■□□□□ 0.74
CCNL1-212ENST00000470121 IQGAP3Q86VI3 1631 aa19.64■□□□□ 0.74
CCNL1-212ENST00000470121 EIF4G2P78344 907 aaKnown RBP eCLIP19.64■□□□□ 0.73
CCNL1-212ENST00000470121 SPAG9O60271 1321 aaKnown RBP19.64■□□□□ 0.73
CCNL1-212ENST00000470121 ZFYVE16Q7Z3T8 1539 aa19.63■□□□□ 0.73
CCNL1-212ENST00000470121 YTHDC1Q96MU7 727 aaKnown RBP19.6■□□□□ 0.73
CCNL1-212ENST00000470121 UHRF1BP1Q6BDS2 1440 aa19.6■□□□□ 0.73
CCNL1-212ENST00000470121 SPATA31E1Q6ZUB1 1445 aa19.6■□□□□ 0.73
CCNL1-212ENST00000470121 PLA2R1Q13018 1463 aa19.59■□□□□ 0.73
CCNL1-212ENST00000470121 ADGRL1O94910 1474 aa19.59■□□□□ 0.73
CCNL1-212ENST00000470121 SCAPERQ9BY12 1400 aa19.59■□□□□ 0.73
CCNL1-212ENST00000470121 INO80Q9ULG1 1556 aaPredicted RBP19.58■□□□□ 0.73
CCNL1-212ENST00000470121 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.72
CCNL1-212ENST00000470121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.725e-8■■■□□ 14.9
CCNL1-212ENST00000470121 WASHC2AQ641Q2 1341 aa19.56■□□□□ 0.72
CCNL1-212ENST00000470121 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
CCNL1-212ENST00000470121 ATP10AO60312 1499 aa19.56■□□□□ 0.72
CCNL1-212ENST00000470121 CD109Q6YHK3 1445 aa19.53■□□□□ 0.72
CCNL1-212ENST00000470121 DEPDC5O75140 1603 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms