RNA–Protein interactions for RNA: ENST00000470027.7

PAX6-214, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 3,587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-214ENST00000470027 PTPRGP23470 1445 aa13.23□□□□□ -0.29
PAX6-214ENST00000470027 PTPRKQ15262 1439 aa13.23□□□□□ -0.29
PAX6-214ENST00000470027 ZCCHC11Q5TAX3 1644 aaKnown RBP13.22□□□□□ -0.29
PAX6-214ENST00000470027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
PAX6-214ENST00000470027 HIRIP3Q9BW71 556 aaPredicted RBP13.22□□□□□ -0.29
PAX6-214ENST00000470027 ITSN2Q9NZM3 1697 aa13.22□□□□□ -0.29
PAX6-214ENST00000470027 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
PAX6-214ENST00000470027 TROQ12816 1431 aaPredicted RBP13.21□□□□□ -0.29
PAX6-214ENST00000470027 UACAQ9BZF9 1416 aa13.2□□□□□ -0.3
PAX6-214ENST00000470027 CDC42BPBQ9Y5S2 1711 aa13.2□□□□□ -0.3
PAX6-214ENST00000470027 ABCC10Q5T3U5 1492 aa13.2□□□□□ -0.3
PAX6-214ENST00000470027 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
PAX6-214ENST00000470027 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
PAX6-214ENST00000470027 PLEKHD1A6NEE1 506 aa13.18□□□□□ -0.3
PAX6-214ENST00000470027 CROCC2H7BZ55 1655 aa13.18□□□□□ -0.3
PAX6-214ENST00000470027 UHRF1BP1LA0JNW5 1464 aa13.18□□□□□ -0.3
PAX6-214ENST00000470027 NPM1P06748 294 aaKnown RBP eCLIP13.17□□□□□ -0.3
PAX6-214ENST00000470027 GCC2Q8IWJ2 1684 aa13.17□□□□□ -0.3
PAX6-214ENST00000470027 MIA2Q96PC5 1412 aa13.17□□□□□ -0.3
PAX6-214ENST00000470027 DNMT1P26358 1616 aaKnown RBP13.16□□□□□ -0.3
PAX6-214ENST00000470027 GPATCH8Q9UKJ3 1502 aaKnown RBP13.16□□□□□ -0.3
PAX6-214ENST00000470027 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
PAX6-214ENST00000470027 KDM5BQ9UGL1 1544 aa13.15□□□□□ -0.3
PAX6-214ENST00000470027 PREX2Q70Z35 1606 aa13.15□□□□□ -0.3
PAX6-214ENST00000470027 FOXD1Q16676 465 aa13.14□□□□□ -0.31
PAX6-214ENST00000470027 CFDP1Q9UEE9 299 aaPredicted RBP13.14□□□□□ -0.31
PAX6-214ENST00000470027 KDM6BO15054 1643 aa13.13□□□□□ -0.31
PAX6-214ENST00000470027 DHX57Q6P158 1386 aaKnown RBP13.13□□□□□ -0.31
PAX6-214ENST00000470027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.12□□□□□ -0.31
PAX6-214ENST00000470027 RAB3GAP2Q9H2M9 1393 aa13.12□□□□□ -0.31
PAX6-214ENST00000470027 SIN3AQ96ST3 1273 aa13.12□□□□□ -0.31
PAX6-214ENST00000470027 ZNF644Q9H582 1327 aaPredicted RBP13.12□□□□□ -0.31
PAX6-214ENST00000470027 ANP32EQ9BTT0 268 aa13.11□□□□□ -0.31
PAX6-214ENST00000470027 MYO5CQ9NQX4 1742 aa13.11□□□□□ -0.31
PAX6-214ENST00000470027 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
PAX6-214ENST00000470027 MAPKBP1O60336 1514 aa13.1□□□□□ -0.31
PAX6-214ENST00000470027 NEFLP07196 543 aa13.1□□□□□ -0.31
PAX6-214ENST00000470027 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
PAX6-214ENST00000470027 ADGBQ8N7X0 1667 aa13.1□□□□□ -0.31
PAX6-214ENST00000470027 SETD5Q9C0A6 1442 aa13.1□□□□□ -0.31
PAX6-214ENST00000470027 HFM1A2PYH4 1435 aa13.09□□□□□ -0.31
PAX6-214ENST00000470027 SAMD9LQ8IVG5 1584 aa13.09□□□□□ -0.31
PAX6-214ENST00000470027 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
PAX6-214ENST00000470027 NAIPQ13075 1403 aa13.08□□□□□ -0.32
PAX6-214ENST00000470027 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
PAX6-214ENST00000470027 DAPK1P53355 1430 aa13.07□□□□□ -0.32
PAX6-214ENST00000470027 ABCC5O15440 1437 aa13.07□□□□□ -0.32
PAX6-214ENST00000470027 FKBP8Q14318 412 aa13.06□□□□□ -0.32
PAX6-214ENST00000470027 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.32
PAX6-214ENST00000470027 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
PAX6-214ENST00000470027 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
PAX6-214ENST00000470027 DENND4BO75064 1496 aaPredicted RBP13.03□□□□□ -0.32
PAX6-214ENST00000470027 TSPY4P0CV99 314 aa13.02□□□□□ -0.32
PAX6-214ENST00000470027 TSPY10P0CW01 314 aa13.02□□□□□ -0.32
PAX6-214ENST00000470027 ARHGEF5Q12774 1597 aa13.02□□□□□ -0.32
PAX6-214ENST00000470027 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.33
PAX6-214ENST00000470027 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.33
PAX6-214ENST00000470027 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.33
PAX6-214ENST00000470027 CHGAP10645 457 aaKnown RBP13.02□□□□□ -0.33
PAX6-214ENST00000470027 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
PAX6-214ENST00000470027 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
PAX6-214ENST00000470027 ABCA9Q8IUA7 1624 aa13.01□□□□□ -0.33
PAX6-214ENST00000470027 ADGRL2O95490 1459 aa13□□□□□ -0.33
PAX6-214ENST00000470027 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
PAX6-214ENST00000470027 ROCK1Q13464 1354 aa12.99□□□□□ -0.33
PAX6-214ENST00000470027 MLECQ14165 292 aa12.99□□□□□ -0.33
PAX6-214ENST00000470027 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
PAX6-214ENST00000470027 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
PAX6-214ENST00000470027 ARHGEF12Q9NZN5 1544 aa12.97□□□□□ -0.33
PAX6-214ENST00000470027 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
PAX6-214ENST00000470027 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
PAX6-214ENST00000470027 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
PAX6-214ENST00000470027 SYCP2Q9BX26 1530 aa12.97□□□□□ -0.33
PAX6-214ENST00000470027 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
PAX6-214ENST00000470027 ARAP3Q8WWN8 1544 aa12.95□□□□□ -0.34
PAX6-214ENST00000470027 ARHGAP5Q13017 1502 aa12.95□□□□□ -0.34
PAX6-214ENST00000470027 NCOA1Q15788 1441 aa12.95□□□□□ -0.34
PAX6-214ENST00000470027 ABCC1P33527 1531 aa12.94□□□□□ -0.34
PAX6-214ENST00000470027 PLCH2O75038 1416 aa12.94□□□□□ -0.34
PAX6-214ENST00000470027 ASXL2Q76L83 1435 aa12.94□□□□□ -0.34
PAX6-214ENST00000470027 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
PAX6-214ENST00000470027 PLXNC1O60486 1568 aa12.91□□□□□ -0.34
PAX6-214ENST00000470027 CCDC141Q6ZP82 1450 aa12.9□□□□□ -0.34
PAX6-214ENST00000470027 C9orf84Q5VXU9 1444 aa12.9□□□□□ -0.34
PAX6-214ENST00000470027 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
PAX6-214ENST00000470027 GGT6Q6P531 493 aa12.89□□□□□ -0.35
PAX6-214ENST00000470027 MAP3K4Q9Y6R4 1608 aa12.87□□□□□ -0.35
PAX6-214ENST00000470027 PZPP20742 1482 aa12.87□□□□□ -0.35
PAX6-214ENST00000470027 AFAP1Q8N556 730 aa12.86□□□□□ -0.35
PAX6-214ENST00000470027 RBM19Q9Y4C8 960 aaKnown RBP12.86□□□□□ -0.35
PAX6-214ENST00000470027 ANP32CO43423 234 aa12.85□□□□□ -0.35
PAX6-214ENST00000470027 INO80Q9ULG1 1556 aaPredicted RBP12.85□□□□□ -0.35
PAX6-214ENST00000470027 KDM5DQ9BY66 1539 aa12.85□□□□□ -0.35
PAX6-214ENST00000470027 ARID4BQ4LE39 1312 aaPredicted RBP12.85□□□□□ -0.35
PAX6-214ENST00000470027 UNC13BO14795 1591 aa12.84□□□□□ -0.35
PAX6-214ENST00000470027 TRAPPC8Q9Y2L5 1435 aa12.84□□□□□ -0.35
PAX6-214ENST00000470027 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
PAX6-214ENST00000470027 ZFYVE16Q7Z3T8 1539 aa12.84□□□□□ -0.35
PAX6-214ENST00000470027 TONSLQ96HA7 1378 aa12.84□□□□□ -0.35
PAX6-214ENST00000470027 FANCAO15360 1455 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms