RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
SPTLC1-204ENST00000469778 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
SPTLC1-204ENST00000469778 ARHGAP5Q13017 1502 aa19.54■□□□□ 0.72
SPTLC1-204ENST00000469778 PLEKHH2Q8IVE3 1493 aa19.52■□□□□ 0.72
SPTLC1-204ENST00000469778 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
SPTLC1-204ENST00000469778 PREX2Q70Z35 1606 aa19.51■□□□□ 0.71
SPTLC1-204ENST00000469778 RSPH4AQ5TD94 716 aa19.5■□□□□ 0.71
SPTLC1-204ENST00000469778 KIAA1107Q9UPP5 1409 aa19.5■□□□□ 0.71
SPTLC1-204ENST00000469778 ITSN2Q9NZM3 1697 aa19.49■□□□□ 0.71
SPTLC1-204ENST00000469778 CDC42BPAQ5VT25 1732 aa19.49■□□□□ 0.71
SPTLC1-204ENST00000469778 MYOM3Q5VTT5 1437 aa19.49■□□□□ 0.71
SPTLC1-204ENST00000469778 CDC42BPBQ9Y5S2 1711 aa19.48■□□□□ 0.71
SPTLC1-204ENST00000469778 DENND4BO75064 1496 aaPredicted RBP19.48■□□□□ 0.71
SPTLC1-204ENST00000469778 ADGRL1O94910 1474 aa19.48■□□□□ 0.71
SPTLC1-204ENST00000469778 KDM6BO15054 1643 aa19.47■□□□□ 0.71
SPTLC1-204ENST00000469778 ZNF777Q9ULD5 760 aaPredicted RBP19.47■□□□□ 0.71
SPTLC1-204ENST00000469778 SCAPERQ9BY12 1400 aa19.47■□□□□ 0.71
SPTLC1-204ENST00000469778 COL17A1Q9UMD9 1497 aaPredicted RBP19.44■□□□□ 0.7
SPTLC1-204ENST00000469778 RAPGEF3O95398 923 aa19.41■□□□□ 0.7
SPTLC1-204ENST00000469778 ZNF518AQ6AHZ1 1483 aa19.41■□□□□ 0.7
SPTLC1-204ENST00000469778 POGZQ7Z3K3 1410 aa19.4■□□□□ 0.7
SPTLC1-204ENST00000469778 MAGI2Q86UL8 1455 aa19.4■□□□□ 0.7
SPTLC1-204ENST00000469778 FGD6Q6ZV73 1430 aa19.39■□□□□ 0.69
SPTLC1-204ENST00000469778 ABCC1P33527 1531 aa19.39■□□□□ 0.69
SPTLC1-204ENST00000469778 HNRNPMP52272 730 aaKnown RBP eCLIP19.38■□□□□ 0.69
SPTLC1-204ENST00000469778 SAMD9LQ8IVG5 1584 aa19.38■□□□□ 0.69
SPTLC1-204ENST00000469778 ZNF644Q9H582 1327 aaPredicted RBP19.38■□□□□ 0.69
SPTLC1-204ENST00000469778 AFAP1Q8N556 730 aa19.37■□□□□ 0.69
SPTLC1-204ENST00000469778 CAMSAP2Q08AD1 1489 aa19.35■□□□□ 0.69
SPTLC1-204ENST00000469778 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
SPTLC1-204ENST00000469778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.35■□□□□ 0.69
SPTLC1-204ENST00000469778 TSPY4P0CV99 314 aa19.35■□□□□ 0.69
SPTLC1-204ENST00000469778 TSPY10P0CW01 314 aa19.35■□□□□ 0.69
SPTLC1-204ENST00000469778 ARHGEF12Q9NZN5 1544 aa19.35■□□□□ 0.69
SPTLC1-204ENST00000469778 PPARGC1BQ86YN6 1023 aaKnown RBP19.34■□□□□ 0.69
SPTLC1-204ENST00000469778 ZMYM4Q5VZL5 1548 aa19.34■□□□□ 0.69
SPTLC1-204ENST00000469778 TCOF1Q13428 1488 aaKnown RBP19.34■□□□□ 0.69
SPTLC1-204ENST00000469778 MLH3Q9UHC1 1453 aa19.34■□□□□ 0.69
SPTLC1-204ENST00000469778 TRAPPC8Q9Y2L5 1435 aa19.33■□□□□ 0.68
SPTLC1-204ENST00000469778 SPAG9O60271 1321 aaKnown RBP19.32■□□□□ 0.68
SPTLC1-204ENST00000469778 RICTORQ6R327 1708 aa19.32■□□□□ 0.68
SPTLC1-204ENST00000469778 KDM5CP41229 1560 aa19.32■□□□□ 0.68
SPTLC1-204ENST00000469778 SYCP2Q9BX26 1530 aa19.31■□□□□ 0.68
SPTLC1-204ENST00000469778 ARHGEF5Q12774 1597 aa19.31■□□□□ 0.68
SPTLC1-204ENST00000469778 CCDC141Q6ZP82 1450 aa19.3■□□□□ 0.68
SPTLC1-204ENST00000469778 PTPN23Q9H3S7 1636 aa19.3■□□□□ 0.68
SPTLC1-204ENST00000469778 RTEL1-TNFRSF6BF6WH68 1400 aa19.3■□□□□ 0.68
SPTLC1-204ENST00000469778 FRMPD1Q5SYB0 1578 aa19.29■□□□□ 0.68
SPTLC1-204ENST00000469778 MYT1LQ9UL68 1186 aa19.28■□□□□ 0.68
SPTLC1-204ENST00000469778 FAM50AQ14320 339 aaKnown RBP19.27■□□□□ 0.68
SPTLC1-204ENST00000469778 RRBP1Q9P2E9 1410 aaKnown RBP19.26■□□□□ 0.67
SPTLC1-204ENST00000469778 ZFYVE16Q7Z3T8 1539 aa19.25■□□□□ 0.67
SPTLC1-204ENST00000469778 HECW2Q9P2P5 1572 aa19.23■□□□□ 0.67
SPTLC1-204ENST00000469778 ATP10AO60312 1499 aa19.23■□□□□ 0.67
SPTLC1-204ENST00000469778 ABCC5O15440 1437 aa19.22■□□□□ 0.67
SPTLC1-204ENST00000469778 SHANK2Q9UPX8 1470 aa19.22■□□□□ 0.67
SPTLC1-204ENST00000469778 DAPK1P53355 1430 aa19.21■□□□□ 0.67
SPTLC1-204ENST00000469778 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
SPTLC1-204ENST00000469778 MAST1Q9Y2H9 1570 aa19.19■□□□□ 0.66
SPTLC1-204ENST00000469778 ARHGEF40Q8TER5 1519 aa19.19■□□□□ 0.66
SPTLC1-204ENST00000469778 DNMT1P26358 1616 aaKnown RBP19.18■□□□□ 0.66
SPTLC1-204ENST00000469778 C9orf84Q5VXU9 1444 aa19.18■□□□□ 0.66
SPTLC1-204ENST00000469778 YEATS2Q9ULM3 1422 aa19.18■□□□□ 0.66
SPTLC1-204ENST00000469778 INO80Q9ULG1 1556 aaPredicted RBP19.17■□□□□ 0.66
SPTLC1-204ENST00000469778 ANKRD30AQ9BXX3 1397 aa19.17■□□□□ 0.66
SPTLC1-204ENST00000469778 KIDINS220Q9ULH0 1771 aa19.16■□□□□ 0.66
SPTLC1-204ENST00000469778 REREQ9P2R6 1566 aa19.16■□□□□ 0.66
SPTLC1-204ENST00000469778 ROCK1Q13464 1354 aa19.14■□□□□ 0.65
SPTLC1-204ENST00000469778 DHX29Q7Z478 1369 aaKnown RBP19.14■□□□□ 0.65
SPTLC1-204ENST00000469778 DIP2CQ9Y2E4 1556 aa19.13■□□□□ 0.65
SPTLC1-204ENST00000469778 AGLP35573 1532 aa19.12■□□□□ 0.65
SPTLC1-204ENST00000469778 A2MP01023 1474 aa19.12■□□□□ 0.65
SPTLC1-204ENST00000469778 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
SPTLC1-204ENST00000469778 ARID4BQ4LE39 1312 aaPredicted RBP19.12■□□□□ 0.65
SPTLC1-204ENST00000469778 ADGRL2O95490 1459 aa19.11■□□□□ 0.65
SPTLC1-204ENST00000469778 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
SPTLC1-204ENST00000469778 ADGBQ8N7X0 1667 aa19.1■□□□□ 0.65
SPTLC1-204ENST00000469778 ABCA6Q8N139 1617 aa19.1■□□□□ 0.65
SPTLC1-204ENST00000469778 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
SPTLC1-204ENST00000469778 CROCC2H7BZ55 1655 aa19.09■□□□□ 0.65
SPTLC1-204ENST00000469778 CHIC2Q9UKJ5 165 aa19.09■□□□□ 0.65
SPTLC1-204ENST00000469778 KIF15Q9NS87 1388 aa19.08■□□□□ 0.65
SPTLC1-204ENST00000469778 RRP7BPQ9NSQ0 103 aa19.08■□□□□ 0.64
SPTLC1-204ENST00000469778 DUOX2Q9NRD8 1548 aa19.07■□□□□ 0.64
SPTLC1-204ENST00000469778 ITGAEP38570 1179 aa19.07■□□□□ 0.64
SPTLC1-204ENST00000469778 PTPRKQ15262 1439 aa19.06■□□□□ 0.64
SPTLC1-204ENST00000469778 ACIN1Q9UKV3 1341 aaKnown RBP19.04■□□□□ 0.64
SPTLC1-204ENST00000469778 ERBINQ96RT1 1412 aa19.04■□□□□ 0.64
SPTLC1-204ENST00000469778 KIF3BO15066 747 aa19.02■□□□□ 0.64
SPTLC1-204ENST00000469778 ESF1Q9H501 851 aaKnown RBP19■□□□□ 0.63
SPTLC1-204ENST00000469778 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
SPTLC1-204ENST00000469778 BCORL1Q5H9F3 1711 aa18.98■□□□□ 0.63
SPTLC1-204ENST00000469778 EIF2AK4Q9P2K8 1649 aaKnown RBP18.98■□□□□ 0.63
SPTLC1-204ENST00000469778 GGT6Q6P531 493 aa18.97■□□□□ 0.63
SPTLC1-204ENST00000469778 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
SPTLC1-204ENST00000469778 FAM135AQ9P2D6 1515 aa18.96■□□□□ 0.63
SPTLC1-204ENST00000469778 HFM1A2PYH4 1435 aa18.96■□□□□ 0.63
SPTLC1-204ENST00000469778 KDM4FA0A1W2PPD8 638 aa18.95■□□□□ 0.62
SPTLC1-204ENST00000469778 MLECQ14165 292 aa18.95■□□□□ 0.62
SPTLC1-204ENST00000469778 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms