RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 CEP162Q5TB80 1403 aa9.05□□□□□ -0.96
CD46-212ENST00000469535 TAF7LQ5H9L4 462 aa9.05□□□□□ -0.96
CD46-212ENST00000469535 LTV1Q96GA3 475 aaPredicted RBP9.05□□□□□ -0.96
CD46-212ENST00000469535 GNL2Q13823 731 aaKnown RBP9.05□□□□□ -0.96
CD46-212ENST00000469535 NGDNQ8NEJ9 315 aaKnown RBP9.05□□□□□ -0.96
CD46-212ENST00000469535 CHMP4BQ9H444 224 aaKnown RBP9.04□□□□□ -0.96
CD46-212ENST00000469535 MIER1Q8N108 512 aa9.04□□□□□ -0.96
CD46-212ENST00000469535 GTF2E1P29083 439 aaPredicted RBP9.04□□□□□ -0.96
CD46-212ENST00000469535 CUX2O14529 1486 aa9.04□□□□□ -0.96
CD46-212ENST00000469535 DNTTIP2Q5QJE6 756 aaKnown RBP9.04□□□□□ -0.96
CD46-212ENST00000469535 PRM3Q9NNZ6 103 aa9.03□□□□□ -0.96
CD46-212ENST00000469535 CARMIL2Q6F5E8 1435 aa9.03□□□□□ -0.96
CD46-212ENST00000469535 HSP90AB1P08238 724 aaKnown RBP9.03□□□□□ -0.96
CD46-212ENST00000469535 CYB5RLQ6IPT4 315 aa9.03□□□□□ -0.96
CD46-212ENST00000469535 GORABQ5T7V8 394 aa9.03□□□□□ -0.96
CD46-212ENST00000469535 EVA1CP58658 441 aa9.02□□□□□ -0.97
CD46-212ENST00000469535 KIF3BO15066 747 aa9.02□□□□□ -0.97
CD46-212ENST00000469535 GOLGA6L4A6NEF3 574 aa9.01□□□□□ -0.97
CD46-212ENST00000469535 MS4A1P11836 297 aa9.01□□□□□ -0.97
CD46-212ENST00000469535 CARMIL1Q5VZK9 1371 aa9.01□□□□□ -0.97
CD46-212ENST00000469535 FRAT2O75474 233 aaPredicted RBP9.01□□□□□ -0.97
CD46-212ENST00000469535 EFCAB2Q5VUJ9 269 aa9.01□□□□□ -0.97
CD46-212ENST00000469535 GOLGA6L6A8MZA4 724 aa9□□□□□ -0.97
CD46-212ENST00000469535 FOXD1Q16676 465 aa9□□□□□ -0.97
CD46-212ENST00000469535 WASHC2CQ9Y4E1 1318 aa9□□□□□ -0.97
CD46-212ENST00000469535 EEA1Q15075 1411 aa8.99□□□□□ -0.97
CD46-212ENST00000469535 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
CD46-212ENST00000469535 AMPHP49418 695 aa8.99□□□□□ -0.97
CD46-212ENST00000469535 CEP164Q9UPV0 1460 aa8.99□□□□□ -0.97
CD46-212ENST00000469535 PKD2Q13563 968 aa8.99□□□□□ -0.97
CD46-212ENST00000469535 SUPT16HQ9Y5B9 1047 aaKnown RBP8.99□□□□□ -0.97
CD46-212ENST00000469535 MCCP23508 829 aa8.98□□□□□ -0.97
CD46-212ENST00000469535 U2AF1L5P0DN76 240 aaPredicted RBP8.98□□□□□ -0.97
CD46-212ENST00000469535 U2AF1Q01081 240 aaKnown RBP eCLIP8.98□□□□□ -0.976e-10■■■□□ 18.8
CD46-212ENST00000469535 SMARCA2P51531 1590 aa8.98□□□□□ -0.97
CD46-212ENST00000469535 PDS5BQ9NTI5 1447 aa8.98□□□□□ -0.97
CD46-212ENST00000469535 SPAG9O60271 1321 aaKnown RBP8.97□□□□□ -0.97
CD46-212ENST00000469535 VPS53Q5VIR6 699 aa8.97□□□□□ -0.97
CD46-212ENST00000469535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.97□□□□□ -0.971e-6■■■□□ 18.3
CD46-212ENST00000469535 DCAF8L1A6NGE4 600 aa8.96□□□□□ -0.97
CD46-212ENST00000469535 HNRNPMP52272 730 aaKnown RBP eCLIP8.96□□□□□ -0.979e-8■■■■■ 28.4
CD46-212ENST00000469535 TDRD9Q8NDG6 1382 aaKnown RBP8.96□□□□□ -0.97
CD46-212ENST00000469535 PDE4CQ08493 712 aa8.96□□□□□ -0.97
CD46-212ENST00000469535 FHAD1B1AJZ9 1412 aa8.96□□□□□ -0.98
CD46-212ENST00000469535 KIAA1211Q6ZU35 1233 aa8.96□□□□□ -0.98
CD46-212ENST00000469535 SPRYD3Q8NCJ5 442 aa8.96□□□□□ -0.98
CD46-212ENST00000469535 SYTL4Q96C24 671 aaPredicted RBP8.96□□□□□ -0.98
CD46-212ENST00000469535 ANP32EQ9BTT0 268 aa8.96□□□□□ -0.98
CD46-212ENST00000469535 STK31Q9BXU1 1019 aa8.95□□□□□ -0.98
CD46-212ENST00000469535 ANO8Q9HCE9 1232 aaPredicted RBP8.95□□□□□ -0.98
CD46-212ENST00000469535 TOMM22Q9NS69 142 aa8.94□□□□□ -0.98
CD46-212ENST00000469535 ROCK2O75116 1388 aaKnown RBP8.94□□□□□ -0.98
CD46-212ENST00000469535 GLIPR1L2Q4G1C9 344 aa8.94□□□□□ -0.98
CD46-212ENST00000469535 SOGA1O94964 1423 aa8.94□□□□□ -0.98
CD46-212ENST00000469535 SLC4A10Q6U841 1118 aa8.94□□□□□ -0.98
CD46-212ENST00000469535 FBXW7Q969H0 707 aa8.94□□□□□ -0.98
CD46-212ENST00000469535 ITPRIPQ8IWB1 547 aa8.93□□□□□ -0.98
CD46-212ENST00000469535 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
CD46-212ENST00000469535 B4GALNT3Q6L9W6 998 aa8.93□□□□□ -0.98
CD46-212ENST00000469535 NRDCO43847 1150 aa8.93□□□□□ -0.98
CD46-212ENST00000469535 RAD21O60216 631 aa8.93□□□□□ -0.98
CD46-212ENST00000469535 NUP155O75694 1391 aa8.92□□□□□ -0.98
CD46-212ENST00000469535 HSP90B1P14625 803 aaKnown RBP8.92□□□□□ -0.98
CD46-212ENST00000469535 CALD1Q05682 793 aaKnown RBP8.92□□□□□ -0.98
CD46-212ENST00000469535 DRC7Q8IY82 874 aa8.92□□□□□ -0.98
CD46-212ENST00000469535 HSCBQ8IWL3 235 aa8.92□□□□□ -0.98
CD46-212ENST00000469535 TERF2IPQ9NYB0 399 aa8.92□□□□□ -0.98
CD46-212ENST00000469535 ERICH6BQ5W0A0 696 aa8.91□□□□□ -0.98
CD46-212ENST00000469535 NGEFQ8N5V2 710 aa8.91□□□□□ -0.98
CD46-212ENST00000469535 IPO8O15397 1037 aaKnown RBP8.91□□□□□ -0.98
CD46-212ENST00000469535 RASSF8Q8NHQ8 419 aa8.91□□□□□ -0.98
CD46-212ENST00000469535 KIAA2012Q0VF49 1180 aa8.91□□□□□ -0.98
CD46-212ENST00000469535 ARHGAP35Q9NRY4 1499 aa8.91□□□□□ -0.98
CD46-212ENST00000469535 MARCH6O60337 910 aa8.9□□□□□ -0.98
CD46-212ENST00000469535 GPATCH3Q96I76 525 aa8.9□□□□□ -0.98
CD46-212ENST00000469535 CWC22Q9HCG8 908 aaKnown RBP8.9□□□□□ -0.98
CD46-212ENST00000469535 TRAK1Q9UPV9 953 aa8.9□□□□□ -0.98
CD46-212ENST00000469535 C1orf141Q5JVX7 400 aa8.9□□□□□ -0.98
CD46-212ENST00000469535 TRIM34Q9BYJ4 488 aa8.9□□□□□ -0.98
CD46-212ENST00000469535 KTN1Q86UP2 1357 aaKnown RBP8.9□□□□□ -0.99
CD46-212ENST00000469535 TRIM6-TRIM34B2RNG4 842 aa8.9□□□□□ -0.99
CD46-212ENST00000469535 CTDP1Q9Y5B0 961 aaPredicted RBP8.89□□□□□ -0.99
CD46-212ENST00000469535 EIF3AQ14152 1382 aaKnown RBP8.89□□□□□ -0.99
CD46-212ENST00000469535 TNIKQ9UKE5 1360 aa8.89□□□□□ -0.99
CD46-212ENST00000469535 OSCARQ8IYS5 282 aa8.89□□□□□ -0.99
CD46-212ENST00000469535 ANKRD30AQ9BXX3 1397 aa8.88□□□□□ -0.99
CD46-212ENST00000469535 CREBRFQ8IUR6 639 aa8.88□□□□□ -0.99
CD46-212ENST00000469535 HSPA5P11021 654 aaKnown RBP8.88□□□□□ -0.99
CD46-212ENST00000469535 FAM69CQ0P6D2 419 aa8.88□□□□□ -0.99
CD46-212ENST00000469535 CHAF1AQ13111 956 aaPredicted RBP8.87□□□□□ -0.99
CD46-212ENST00000469535 PPP1R1BQ9UD71 204 aaPredicted RBP8.87□□□□□ -0.99
CD46-212ENST00000469535 CHMP4AQ9BY43 222 aa8.87□□□□□ -0.99
CD46-212ENST00000469535 CCDC146Q8IYE0 955 aa8.87□□□□□ -0.99
CD46-212ENST00000469535 WWC1Q8IX03 1113 aa8.87□□□□□ -0.99
CD46-212ENST00000469535 NOC3LQ8WTT2 800 aaKnown RBP8.87□□□□□ -0.99
CD46-212ENST00000469535 PSME1Q06323 249 aa8.87□□□□□ -0.99
CD46-212ENST00000469535 SAMD1Q6SPF0 538 aaPredicted RBP8.86□□□□□ -0.99
CD46-212ENST00000469535 TTC5Q8N0Z6 440 aa8.86□□□□□ -0.99
CD46-212ENST00000469535 SMC4Q9NTJ3 1288 aa8.86□□□□□ -0.99
CD46-212ENST00000469535 CNKSR2Q8WXI2 1034 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms