RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
GAPVD1-214ENST00000469528 MYT1LQ9UL68 1186 aa20.75■□□□□ 0.91
GAPVD1-214ENST00000469528 PCF11O94913 1555 aaKnown RBP20.75■□□□□ 0.91
GAPVD1-214ENST00000469528 HECW1Q76N89 1606 aa20.75■□□□□ 0.91
GAPVD1-214ENST00000469528 CLIP1P30622 1438 aa20.74■□□□□ 0.91
GAPVD1-214ENST00000469528 YEATS2Q9ULM3 1422 aa20.73■□□□□ 0.91
GAPVD1-214ENST00000469528 ATP10AO60312 1499 aa20.73■□□□□ 0.91
GAPVD1-214ENST00000469528 ARHGAP35Q9NRY4 1499 aa20.73■□□□□ 0.91
GAPVD1-214ENST00000469528 RIMS1Q86UR5 1692 aaKnown RBP20.7■□□□□ 0.91
GAPVD1-214ENST00000469528 LMTK3Q96Q04 1460 aa20.7■□□□□ 0.9
GAPVD1-214ENST00000469528 TROQ12816 1431 aaPredicted RBP20.7■□□□□ 0.9
GAPVD1-214ENST00000469528 HSPA2P54652 639 aa20.67■□□□□ 0.9
GAPVD1-214ENST00000469528 AFAP1Q8N556 730 aa20.67■□□□□ 0.9
GAPVD1-214ENST00000469528 C9orf84Q5VXU9 1444 aa20.67■□□□□ 0.9
GAPVD1-214ENST00000469528 ZNF518AQ6AHZ1 1483 aa20.67■□□□□ 0.9
GAPVD1-214ENST00000469528 MYO5CQ9NQX4 1742 aa20.67■□□□□ 0.9
GAPVD1-214ENST00000469528 KIF14Q15058 1648 aa20.65■□□□□ 0.9
GAPVD1-214ENST00000469528 ARHGAP5Q13017 1502 aa20.64■□□□□ 0.9
GAPVD1-214ENST00000469528 ESF1Q9H501 851 aaKnown RBP20.64■□□□□ 0.89
GAPVD1-214ENST00000469528 DMRT2Q9Y5R5 561 aa20.62■□□□□ 0.89
GAPVD1-214ENST00000469528 CCDC18Q5T9S5 1454 aa20.59■□□□□ 0.89
GAPVD1-214ENST00000469528 CASKIN1Q8WXD9 1431 aa20.59■□□□□ 0.89
GAPVD1-214ENST00000469528 FER1L4A9Z1Z3 1794 aa20.58■□□□□ 0.89
GAPVD1-214ENST00000469528 ARHGEF12Q9NZN5 1544 aa20.58■□□□□ 0.88
GAPVD1-214ENST00000469528 CEBPAP49715 358 aaPredicted RBP20.57■□□□□ 0.88
GAPVD1-214ENST00000469528 CERKQ8TCT0 537 aa20.56■□□□□ 0.88
GAPVD1-214ENST00000469528 SIGLEC1Q9BZZ2 1709 aa20.55■□□□□ 0.88
GAPVD1-214ENST00000469528 MLH3Q9UHC1 1453 aa20.55■□□□□ 0.88
GAPVD1-214ENST00000469528 KDM5CP41229 1560 aa20.53■□□□□ 0.88
GAPVD1-214ENST00000469528 SETD1BQ9UPS6 1966 aaKnown RBP20.52■□□□□ 0.88
GAPVD1-214ENST00000469528 ZNF777Q9ULD5 760 aaPredicted RBP20.5■□□□□ 0.87
GAPVD1-214ENST00000469528 UHRF1BP1Q6BDS2 1440 aa20.5■□□□□ 0.87
GAPVD1-214ENST00000469528 CDC42BPBQ9Y5S2 1711 aa20.49■□□□□ 0.87
GAPVD1-214ENST00000469528 REREQ9P2R6 1566 aa20.48■□□□□ 0.87
GAPVD1-214ENST00000469528 TRAPPC8Q9Y2L5 1435 aa20.47■□□□□ 0.87
GAPVD1-214ENST00000469528 PREX1Q8TCU6 1659 aa20.46■□□□□ 0.87
GAPVD1-214ENST00000469528 FYCO1Q9BQS8 1478 aa20.46■□□□□ 0.87
GAPVD1-214ENST00000469528 AGLP35573 1532 aa20.46■□□□□ 0.87
GAPVD1-214ENST00000469528 LRRIQ1Q96JM4 1722 aa20.45■□□□□ 0.86
GAPVD1-214ENST00000469528 DIP2CQ9Y2E4 1556 aa20.45■□□□□ 0.86
GAPVD1-214ENST00000469528 PREX2Q70Z35 1606 aa20.45■□□□□ 0.86
GAPVD1-214ENST00000469528 CFDP1Q9UEE9 299 aaPredicted RBP20.44■□□□□ 0.86
GAPVD1-214ENST00000469528 SPAG9O60271 1321 aaKnown RBP20.44■□□□□ 0.86
GAPVD1-214ENST00000469528 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
GAPVD1-214ENST00000469528 ABCC1P33527 1531 aa20.43■□□□□ 0.86
GAPVD1-214ENST00000469528 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.86
GAPVD1-214ENST00000469528 PLEKHH2Q8IVE3 1493 aa20.39■□□□□ 0.85
GAPVD1-214ENST00000469528 CCNB3Q8WWL7 1395 aa20.39■□□□□ 0.85
GAPVD1-214ENST00000469528 ABCA6Q8N139 1617 aa20.38■□□□□ 0.85
GAPVD1-214ENST00000469528 KIAA1107Q9UPP5 1409 aa20.38■□□□□ 0.85
GAPVD1-214ENST00000469528 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
GAPVD1-214ENST00000469528 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
GAPVD1-214ENST00000469528 MTUS2Q5JR59 1369 aa20.37■□□□□ 0.85
GAPVD1-214ENST00000469528 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
GAPVD1-214ENST00000469528 CDC42BPAQ5VT25 1732 aa20.36■□□□□ 0.85
GAPVD1-214ENST00000469528 PTPRTO14522 1441 aa20.36■□□□□ 0.85
GAPVD1-214ENST00000469528 KIDINS220Q9ULH0 1771 aa20.35■□□□□ 0.85
GAPVD1-214ENST00000469528 ZMYM3Q14202 1370 aa20.34■□□□□ 0.85
GAPVD1-214ENST00000469528 SAMD9LQ8IVG5 1584 aa20.34■□□□□ 0.85
GAPVD1-214ENST00000469528 C3P01024 1663 aa20.32■□□□□ 0.84
GAPVD1-214ENST00000469528 NPATQ14207 1427 aa20.32■□□□□ 0.84
GAPVD1-214ENST00000469528 GGT6Q6P531 493 aa20.31■□□□□ 0.84
GAPVD1-214ENST00000469528 STRCQ7RTU9 1775 aa20.31■□□□□ 0.84
GAPVD1-214ENST00000469528 SYCP2Q9BX26 1530 aa20.29■□□□□ 0.84
GAPVD1-214ENST00000469528 RSPH4AQ5TD94 716 aa20.29■□□□□ 0.84
GAPVD1-214ENST00000469528 A2MP01023 1474 aa20.27■□□□□ 0.84
GAPVD1-214ENST00000469528 ATP7AQ04656 1500 aa20.26■□□□□ 0.83
GAPVD1-214ENST00000469528 PKD2Q13563 968 aa20.25■□□□□ 0.83
GAPVD1-214ENST00000469528 MROH2AA6NES4 1674 aa20.24■□□□□ 0.83
GAPVD1-214ENST00000469528 NCOA1Q15788 1441 aa20.24■□□□□ 0.83
GAPVD1-214ENST00000469528 SUPT6HQ7KZ85 1726 aaKnown RBP20.23■□□□□ 0.83
GAPVD1-214ENST00000469528 RTEL1-TNFRSF6BF6WH68 1400 aa20.21■□□□□ 0.83
GAPVD1-214ENST00000469528 ZNF644Q9H582 1327 aaPredicted RBP20.21■□□□□ 0.83
GAPVD1-214ENST00000469528 NCKAP5LQ9HCH0 1330 aa20.19■□□□□ 0.82
GAPVD1-214ENST00000469528 DHX29Q7Z478 1369 aaKnown RBP20.19■□□□□ 0.82
GAPVD1-214ENST00000469528 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
GAPVD1-214ENST00000469528 CAMSAP1Q5T5Y3 1602 aa20.18■□□□□ 0.82
GAPVD1-214ENST00000469528 TSPY4P0CV99 314 aa20.18■□□□□ 0.82
GAPVD1-214ENST00000469528 TSPY10P0CW01 314 aa20.18■□□□□ 0.82
GAPVD1-214ENST00000469528 IQSEC2Q5JU85 1478 aa20.18■□□□□ 0.82
GAPVD1-214ENST00000469528 EHBP1L1Q8N3D4 1523 aa20.17■□□□□ 0.82
GAPVD1-214ENST00000469528 INO80Q9ULG1 1556 aaPredicted RBP20.17■□□□□ 0.82
GAPVD1-214ENST00000469528 PTPRKQ15262 1439 aa20.16■□□□□ 0.82
GAPVD1-214ENST00000469528 MBD5Q9P267 1494 aa20.16■□□□□ 0.82
GAPVD1-214ENST00000469528 PLXNC1O60486 1568 aa20.16■□□□□ 0.82
GAPVD1-214ENST00000469528 KIF3BO15066 747 aa20.15■□□□□ 0.82
GAPVD1-214ENST00000469528 ADGBQ8N7X0 1667 aa20.15■□□□□ 0.82
GAPVD1-214ENST00000469528 CLTCQ00610 1675 aaKnown RBP20.14■□□□□ 0.81
GAPVD1-214ENST00000469528 DISP3Q9P2K9 1392 aa20.14■□□□□ 0.81
GAPVD1-214ENST00000469528 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
GAPVD1-214ENST00000469528 WASHC2CQ9Y4E1 1318 aa20.13■□□□□ 0.81
GAPVD1-214ENST00000469528 LTBP4Q8N2S1 1624 aa20.12■□□□□ 0.81
GAPVD1-214ENST00000469528 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
GAPVD1-214ENST00000469528 ZNF335Q9H4Z2 1342 aaPredicted RBP20.08■□□□□ 0.81
GAPVD1-214ENST00000469528 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.81
GAPVD1-214ENST00000469528 UBAP1LF5GYI3 381 aa20.08■□□□□ 0.81
GAPVD1-214ENST00000469528 THEMISQ8N1K5 641 aaPredicted RBP20.07■□□□□ 0.8
GAPVD1-214ENST00000469528 CEP170BQ9Y4F5 1589 aaPredicted RBP20.07■□□□□ 0.8
GAPVD1-214ENST00000469528 A2ML1A8K2U0 1454 aa20.06■□□□□ 0.8
GAPVD1-214ENST00000469528 NCOA2Q15596 1464 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms