RNA–Protein interactions for RNA: ENST00000468789.5

MECOM-208, Transcript of MDS1 and EVI1 complex locus, human

APPRIS P3 TSL 2 BASIC

Gene MECOM, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECOM-208	ENST00000468789	KIF7	Q2M1P5	1343 aa		10.82	□□□□□ -0.68
MECOM-208	ENST00000468789		A0A0U1RQG5	324 aa	Predicted RBP	10.8	□□□□□ -0.68
MECOM-208	ENST00000468789	MS4A1	P11836	297 aa		10.8	□□□□□ -0.68
MECOM-208	ENST00000468789	CCDC18	Q5T9S5	1454 aa		10.79	□□□□□ -0.68
MECOM-208	ENST00000468789	CRBN	Q96SW2	442 aa		10.79	□□□□□ -0.68
MECOM-208	ENST00000468789	SPRYD3	Q8NCJ5	442 aa		10.78	□□□□□ -0.68
MECOM-208	ENST00000468789	CDCA7L	Q96GN5	454 aa		10.78	□□□□□ -0.68
MECOM-208	ENST00000468789	LRRC9	Q6ZRR7	1453 aa		10.78	□□□□□ -0.68
MECOM-208	ENST00000468789	PRX	Q9BXM0	1461 aa		10.77	□□□□□ -0.69
MECOM-208	ENST00000468789	RNF123	Q5XPI4	1314 aa		10.77	□□□□□ -0.69
MECOM-208	ENST00000468789	NBPF8	Q3BBV2	869 aa		10.76	□□□□□ -0.69
MECOM-208	ENST00000468789	ARID3C	A6NKF2	412 aa		10.75	□□□□□ -0.69
MECOM-208	ENST00000468789	PNISR	Q8TF01	805 aa	Known RBP	10.75	□□□□□ -0.69
MECOM-208	ENST00000468789	ARID3A	Q99856	593 aa		10.74	□□□□□ -0.69
MECOM-208	ENST00000468789	KIF27	Q86VH2	1401 aa		10.74	□□□□□ -0.69
MECOM-208	ENST00000468789	UACA	Q9BZF9	1416 aa		10.73	□□□□□ -0.69
MECOM-208	ENST00000468789	AQR	O60306	1485 aa	Known RBP eCLIP	10.73	□□□□□ -0.69
MECOM-208	ENST00000468789	NCBP3	Q53F19	620 aa	Known RBP	10.72	□□□□□ -0.69
MECOM-208	ENST00000468789	MTUS2	Q5JR59	1369 aa		10.72	□□□□□ -0.69
MECOM-208	ENST00000468789	C20orf194	Q5TEA3	1177 aa		10.72	□□□□□ -0.69
MECOM-208	ENST00000468789	TIAM1	Q13009	1591 aa		10.72	□□□□□ -0.69
MECOM-208	ENST00000468789	FAM161A	Q3B820	660 aa		10.72	□□□□□ -0.69
MECOM-208	ENST00000468789	L1TD1	Q5T7N2	865 aa	Known RBP	10.72	□□□□□ -0.69
MECOM-208	ENST00000468789	PANK2	Q9BZ23	570 aa		10.72	□□□□□ -0.69
MECOM-208	ENST00000468789	MPHOSPH9	Q99550	1183 aa		10.71	□□□□□ -0.69
MECOM-208	ENST00000468789	NCAPD3	P42695	1498 aa		10.7	□□□□□ -0.7
MECOM-208	ENST00000468789	NCOA1	Q15788	1441 aa		10.7	□□□□□ -0.7
MECOM-208	ENST00000468789	RRP9	O43818	475 aa	Known RBP	10.7	□□□□□ -0.7
MECOM-208	ENST00000468789	ERICH3	Q5RHP9	1530 aa		10.69	□□□□□ -0.7
MECOM-208	ENST00000468789	GOLGA6L3	A6NEY3	463 aa		10.69	□□□□□ -0.7
MECOM-208	ENST00000468789	PTPRK	Q15262	1439 aa		10.68	□□□□□ -0.7
MECOM-208	ENST00000468789	NCOA2	Q15596	1464 aa		10.68	□□□□□ -0.7
MECOM-208	ENST00000468789	FMN1	Q68DA7	1419 aa		10.68	□□□□□ -0.7
MECOM-208	ENST00000468789	FHOD3	Q2V2M9	1422 aa		10.67	□□□□□ -0.7
MECOM-208	ENST00000468789	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.67	□□□□□ -0.7
MECOM-208	ENST00000468789	KDM2A	Q9Y2K7	1162 aa		10.67	□□□□□ -0.7
MECOM-208	ENST00000468789	XRCC6	P12956	609 aa	Known RBP eCLIP	10.66	□□□□□ -0.7
MECOM-208	ENST00000468789	TRIM44	Q96DX7	344 aa	Predicted RBP	10.66	□□□□□ -0.7
MECOM-208	ENST00000468789	BECN1	Q14457	450 aa		10.65	□□□□□ -0.7
MECOM-208	ENST00000468789	C8orf34	Q49A92	452 aa		10.65	□□□□□ -0.7
MECOM-208	ENST00000468789	CC2D1B	Q5T0F9	858 aa	Known RBP	10.65	□□□□□ -0.7
MECOM-208	ENST00000468789	FGD6	Q6ZV73	1430 aa		10.65	□□□□□ -0.7
MECOM-208	ENST00000468789	NAIP	Q13075	1403 aa		10.64	□□□□□ -0.71
MECOM-208	ENST00000468789	MAP3K1	Q13233	1512 aa		10.63	□□□□□ -0.71
MECOM-208	ENST00000468789	RBM10	P98175	930 aa	Known RBP	10.63	□□□□□ -0.71
MECOM-208	ENST00000468789	HFM1	A2PYH4	1435 aa		10.63	□□□□□ -0.71
MECOM-208	ENST00000468789	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.63	□□□□□ -0.71
MECOM-208	ENST00000468789	MYH16	Q9H6N6	1097 aa		10.63	□□□□□ -0.71
MECOM-208	ENST00000468789	KTN1	Q86UP2	1357 aa	Known RBP	10.63	□□□□□ -0.71
MECOM-208	ENST00000468789	CARMIL1	Q5VZK9	1371 aa		10.62	□□□□□ -0.71
MECOM-208	ENST00000468789	CLCN1	P35523	988 aa		10.62	□□□□□ -0.71
MECOM-208	ENST00000468789	CARD11	Q9BXL7	1154 aa		10.62	□□□□□ -0.71
MECOM-208	ENST00000468789	DHX29	Q7Z478	1369 aa	Known RBP	10.61	□□□□□ -0.71
MECOM-208	ENST00000468789	TOP2B	Q02880	1626 aa		10.6	□□□□□ -0.71
MECOM-208	ENST00000468789	SEC24B	O95487	1268 aa		10.6	□□□□□ -0.71
MECOM-208	ENST00000468789	USP47	Q96K76	1375 aa		10.6	□□□□□ -0.71
MECOM-208	ENST00000468789	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.6	□□□□□ -0.71
MECOM-208	ENST00000468789	HMGXB3	Q12766	1538 aa		10.6	□□□□□ -0.71
MECOM-208	ENST00000468789	ESPN	B1AK53	854 aa		10.59	□□□□□ -0.71
MECOM-208	ENST00000468789	UPF2	Q9HAU5	1272 aa	Known RBP	10.59	□□□□□ -0.71
MECOM-208	ENST00000468789	KDM5B	Q9UGL1	1544 aa		10.59	□□□□□ -0.71
MECOM-208	ENST00000468789	PDE3B	Q13370	1112 aa		10.59	□□□□□ -0.71
MECOM-208	ENST00000468789	FAM13B	Q9NYF5	915 aa		10.59	□□□□□ -0.71
MECOM-208	ENST00000468789	CANX	P27824	592 aa	Known RBP	10.58	□□□□□ -0.72
MECOM-208	ENST00000468789	ST20-MTHFS	A0A0A6YYL1	179 aa		10.58	□□□□□ -0.72
MECOM-208	ENST00000468789	IGF1R	P08069	1367 aa		10.58	□□□□□ -0.72
MECOM-208	ENST00000468789	ZBTB7C	A1YPR0	619 aa		10.57	□□□□□ -0.72
MECOM-208	ENST00000468789	PTPN23	Q9H3S7	1636 aa		10.57	□□□□□ -0.72
MECOM-208	ENST00000468789	ATAD2B	Q9ULI0	1458 aa		10.57	□□□□□ -0.72
MECOM-208	ENST00000468789	NLRP13	Q86W25	1043 aa		10.56	□□□□□ -0.72
MECOM-208	ENST00000468789	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.56	□□□□□ -0.72
MECOM-208	ENST00000468789	KIF15	Q9NS87	1388 aa		10.56	□□□□□ -0.72
MECOM-208	ENST00000468789	TRAK2	O60296	914 aa		10.55	□□□□□ -0.72
MECOM-208	ENST00000468789	RALBP1	Q15311	655 aa		10.55	□□□□□ -0.72
MECOM-208	ENST00000468789	KIAA1211	Q6ZU35	1233 aa		10.55	□□□□□ -0.72
MECOM-208	ENST00000468789	PCF11	O94913	1555 aa	Known RBP	10.55	□□□□□ -0.72
MECOM-208	ENST00000468789	ERBB4	Q15303	1308 aa		10.54	□□□□□ -0.72
MECOM-208	ENST00000468789	KDM2B	Q8NHM5	1336 aa		10.54	□□□□□ -0.72
MECOM-208	ENST00000468789	MCM4	P33991	863 aa		10.53	□□□□□ -0.72
MECOM-208	ENST00000468789	GRPEL1	Q9HAV7	217 aa		10.53	□□□□□ -0.72
MECOM-208	ENST00000468789	PRDM10	Q9NQV6	1147 aa		10.53	□□□□□ -0.72
MECOM-208	ENST00000468789	BRD4	O60885	1362 aa	Predicted RBP	10.53	□□□□□ -0.72
MECOM-208	ENST00000468789	MRE11	P49959	708 aa		10.53	□□□□□ -0.72
MECOM-208	ENST00000468789	PDCL3	Q9H2J4	239 aa		10.53	□□□□□ -0.72
MECOM-208	ENST00000468789	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.52	□□□□□ -0.73
MECOM-208	ENST00000468789	TBC1D2	Q9BYX2	928 aa		10.52	□□□□□ -0.73
MECOM-208	ENST00000468789	WDR43	Q15061	677 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
MECOM-208	ENST00000468789	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
MECOM-208	ENST00000468789	CUX1	P39880	1505 aa		10.51	□□□□□ -0.73
MECOM-208	ENST00000468789	BCAR3	O75815	825 aa		10.51	□□□□□ -0.73
MECOM-208	ENST00000468789	IGHD	P01880	384 aa		10.51	□□□□□ -0.73
MECOM-208	ENST00000468789	FOXD4L1	Q9NU39	408 aa		10.51	□□□□□ -0.73
MECOM-208	ENST00000468789	CCDC146	Q8IYE0	955 aa		10.5	□□□□□ -0.73
MECOM-208	ENST00000468789	ADAMTS8	Q9UP79	889 aa		10.5	□□□□□ -0.73
MECOM-208	ENST00000468789	CFTR	P13569	1480 aa		10.5	□□□□□ -0.73
MECOM-208	ENST00000468789	LRPPRC	P42704	1394 aa	Known RBP	10.5	□□□□□ -0.73
MECOM-208	ENST00000468789	SPATA31E1	Q6ZUB1	1445 aa		10.5	□□□□□ -0.73
MECOM-208	ENST00000468789	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.49	□□□□□ -0.73
MECOM-208	ENST00000468789	MFAP1	P55081	439 aa	Known RBP	10.49	□□□□□ -0.73
MECOM-208	ENST00000468789	ANP32B	Q92688	251 aa	Known RBP	10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms