RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 ERCC6L2Q5T890 1561 aa18.46■□□□□ 0.55
SHANK2-214ENST00000468619 CDK13Q14004 1512 aaKnown RBP18.45■□□□□ 0.54
SHANK2-214ENST00000468619 PLB1Q6P1J6 1458 aa18.45■□□□□ 0.54
SHANK2-214ENST00000468619 EPRSP07814 1512 aaKnown RBP18.44■□□□□ 0.54
SHANK2-214ENST00000468619 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.43■□□□□ 0.54
SHANK2-214ENST00000468619 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-214ENST00000468619 CCDC18Q5T9S5 1454 aa18.42■□□□□ 0.54
SHANK2-214ENST00000468619 MTUS2Q5JR59 1369 aa18.42■□□□□ 0.54
SHANK2-214ENST00000468619 NUP153P49790 1475 aaKnown RBP18.42■□□□□ 0.54
SHANK2-214ENST00000468619 MAGI3Q5TCQ9 1506 aa18.4■□□□□ 0.54
SHANK2-214ENST00000468619 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
SHANK2-214ENST00000468619 PHLDB1Q86UU1 1377 aa18.38■□□□□ 0.53
SHANK2-214ENST00000468619 PTPRGP23470 1445 aa18.38■□□□□ 0.53
SHANK2-214ENST00000468619 ABCA8O94911 1581 aa18.36■□□□□ 0.53
SHANK2-214ENST00000468619 EHBP1L1Q8N3D4 1523 aa18.35■□□□□ 0.53
SHANK2-214ENST00000468619 SUPT6HQ7KZ85 1726 aaKnown RBP18.33■□□□□ 0.52
SHANK2-214ENST00000468619 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
SHANK2-214ENST00000468619 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.52
SHANK2-214ENST00000468619 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
SHANK2-214ENST00000468619 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
SHANK2-214ENST00000468619 IPO9Q96P70 1041 aaKnown RBP18.31■□□□□ 0.52
SHANK2-214ENST00000468619 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
SHANK2-214ENST00000468619 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
SHANK2-214ENST00000468619 CCDC184Q52MB2 194 aa18.29■□□□□ 0.52
SHANK2-214ENST00000468619 UACAQ9BZF9 1416 aa18.26■□□□□ 0.51
SHANK2-214ENST00000468619 FAM9BQ8IZU0 186 aa18.26■□□□□ 0.51
SHANK2-214ENST00000468619 ATP10BO94823 1461 aa18.25■□□□□ 0.51
SHANK2-214ENST00000468619 UBE2Q2Q8WVN8 375 aa18.25■□□□□ 0.51
SHANK2-214ENST00000468619 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
SHANK2-214ENST00000468619 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
SHANK2-214ENST00000468619 FGD6Q6ZV73 1430 aa18.22■□□□□ 0.51
SHANK2-214ENST00000468619 MYOM3Q5VTT5 1437 aa18.21■□□□□ 0.51
SHANK2-214ENST00000468619 ABCC2Q92887 1545 aa18.21■□□□□ 0.51
SHANK2-214ENST00000468619 KIF14Q15058 1648 aa18.2■□□□□ 0.5
SHANK2-214ENST00000468619 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
SHANK2-214ENST00000468619 PLEKHD1A6NEE1 506 aa18.17■□□□□ 0.5
SHANK2-214ENST00000468619 LAS1LQ9Y4W2 734 aaKnown RBP18.17■□□□□ 0.5
SHANK2-214ENST00000468619 WASHC2AQ641Q2 1341 aa18.16■□□□□ 0.5
SHANK2-214ENST00000468619 NPM2Q86SE8 214 aaKnown RBP18.16■□□□□ 0.5
SHANK2-214ENST00000468619 NEFMP07197 916 aa18.15■□□□□ 0.5
SHANK2-214ENST00000468619 PTPN23Q9H3S7 1636 aa18.15■□□□□ 0.5
SHANK2-214ENST00000468619 ADCY10Q96PN6 1610 aa18.15■□□□□ 0.5
SHANK2-214ENST00000468619 ZBED9Q6R2W3 1325 aa18.14■□□□□ 0.49
SHANK2-214ENST00000468619 EIF5BO60841 1220 aaKnown RBP18.13■□□□□ 0.49
SHANK2-214ENST00000468619 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
SHANK2-214ENST00000468619 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
SHANK2-214ENST00000468619 UHRF1BP1LA0JNW5 1464 aa18.11■□□□□ 0.49
SHANK2-214ENST00000468619 AKNAQ7Z591 1439 aa18.1■□□□□ 0.49
SHANK2-214ENST00000468619 HSPA5P11021 654 aaKnown RBP18.09■□□□□ 0.49
SHANK2-214ENST00000468619 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
SHANK2-214ENST00000468619 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.09■□□□□ 0.498e-9■■■■■ 30
SHANK2-214ENST00000468619 KDM5BQ9UGL1 1544 aa18.07■□□□□ 0.48
SHANK2-214ENST00000468619 ITSN2Q9NZM3 1697 aa18.07■□□□□ 0.48
SHANK2-214ENST00000468619 CDC42BPAQ5VT25 1732 aa18.07■□□□□ 0.48
SHANK2-214ENST00000468619 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
SHANK2-214ENST00000468619 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
SHANK2-214ENST00000468619 TCOF1Q13428 1488 aaKnown RBP18.06■□□□□ 0.48
SHANK2-214ENST00000468619 GPATCH8Q9UKJ3 1502 aaKnown RBP18.06■□□□□ 0.48
SHANK2-214ENST00000468619 ZNF644Q9H582 1327 aaPredicted RBP18.06■□□□□ 0.48
SHANK2-214ENST00000468619 ABCC10Q5T3U5 1492 aa18.05■□□□□ 0.48
SHANK2-214ENST00000468619 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
SHANK2-214ENST00000468619 PTPRKQ15262 1439 aa18.04■□□□□ 0.48
SHANK2-214ENST00000468619 C11orf95C9JLR9 678 aaPredicted RBP18.04■□□□□ 0.48
SHANK2-214ENST00000468619 WASHC2CQ9Y4E1 1318 aa18.03■□□□□ 0.48
SHANK2-214ENST00000468619 CFDP1Q9UEE9 299 aaPredicted RBP18.03■□□□□ 0.48
SHANK2-214ENST00000468619 ZNF777Q9ULD5 760 aaPredicted RBP18.03■□□□□ 0.48
SHANK2-214ENST00000468619 USP35Q9P2H5 1018 aa18.02■□□□□ 0.48
SHANK2-214ENST00000468619 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
SHANK2-214ENST00000468619 CNTLNQ9NXG0 1405 aa18■□□□□ 0.47
SHANK2-214ENST00000468619 CNGB1Q14028 1251 aaPredicted RBP18■□□□□ 0.47
SHANK2-214ENST00000468619 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
SHANK2-214ENST00000468619 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHANK2-214ENST00000468619 CHIC2Q9UKJ5 165 aa17.99■□□□□ 0.47
SHANK2-214ENST00000468619 RIMBP3CA6NJZ7 1639 aa17.99■□□□□ 0.47
SHANK2-214ENST00000468619 RIMBP3BA6NNM3 1639 aa17.99■□□□□ 0.47
SHANK2-214ENST00000468619 RIMBP3Q9UFD9 1639 aa17.99■□□□□ 0.47
SHANK2-214ENST00000468619 EIF4G2P78344 907 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHANK2-214ENST00000468619 CDC42BPBQ9Y5S2 1711 aa17.98■□□□□ 0.47
SHANK2-214ENST00000468619 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
SHANK2-214ENST00000468619 PREX2Q70Z35 1606 aa17.96■□□□□ 0.47
SHANK2-214ENST00000468619 DNMT1P26358 1616 aaKnown RBP17.95■□□□□ 0.46
SHANK2-214ENST00000468619 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
SHANK2-214ENST00000468619 PPM1GO15355 546 aaPredicted RBP17.94■□□□□ 0.46
SHANK2-214ENST00000468619 CYB5RLQ6IPT4 315 aa17.94■□□□□ 0.46
SHANK2-214ENST00000468619 MYO5CQ9NQX4 1742 aa17.94■□□□□ 0.46
SHANK2-214ENST00000468619 DAPK1P53355 1430 aa17.94■□□□□ 0.46
SHANK2-214ENST00000468619 WDR7Q9Y4E6 1490 aa17.93■□□□□ 0.46
SHANK2-214ENST00000468619 GSE1Q14687 1217 aa17.93■□□□□ 0.46
SHANK2-214ENST00000468619 ABCC5O15440 1437 aa17.92■□□□□ 0.46
SHANK2-214ENST00000468619 PDE4AP27815 886 aa17.92■□□□□ 0.46
SHANK2-214ENST00000468619 RRP7BPQ9NSQ0 103 aa17.92■□□□□ 0.46
SHANK2-214ENST00000468619 ASXL2Q76L83 1435 aa17.92■□□□□ 0.46
SHANK2-214ENST00000468619 RNF123Q5XPI4 1314 aa17.92■□□□□ 0.46
SHANK2-214ENST00000468619 NPM1P06748 294 aaKnown RBP eCLIP17.92■□□□□ 0.46
SHANK2-214ENST00000468619 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
SHANK2-214ENST00000468619 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
SHANK2-214ENST00000468619 SAMD9LQ8IVG5 1584 aa17.9■□□□□ 0.46
SHANK2-214ENST00000468619 CCDC7Q96M83 1385 aa17.89■□□□□ 0.45
SHANK2-214ENST00000468619 NAIPQ13075 1403 aa17.89■□□□□ 0.45
SHANK2-214ENST00000468619 CROCC2H7BZ55 1655 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms