RNA–Protein interactions for RNA: ENST00000468221.5

SLC11A1-205, Transcript of solute carrier family 11 member 1, humanhuman

TSL 1 (best)

Gene SLC11A1, Length 5,772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1-205ENST00000468221 GBP4Q96PP9 640 aa15.39■□□□□ 0.05
SLC11A1-205ENST00000468221 SRPK2P78362 688 aaKnown RBP15.38■□□□□ 0.05
SLC11A1-205ENST00000468221 KIAA1211Q6ZU35 1233 aa15.38■□□□□ 0.05
SLC11A1-205ENST00000468221 CLSTN1O94985 981 aa15.37■□□□□ 0.05
SLC11A1-205ENST00000468221 HTATSF1O43719 755 aaKnown RBP15.37■□□□□ 0.05
SLC11A1-205ENST00000468221 CALD1Q05682 793 aaKnown RBP15.36■□□□□ 0.05
SLC11A1-205ENST00000468221 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
SLC11A1-205ENST00000468221 KIAA2012Q0VF49 1180 aa15.36■□□□□ 0.05
SLC11A1-205ENST00000468221 KTN1Q86UP2 1357 aaKnown RBP15.35■□□□□ 0.05
SLC11A1-205ENST00000468221 ERCC6Q03468 1493 aa15.34■□□□□ 0.05
SLC11A1-205ENST00000468221 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
SLC11A1-205ENST00000468221 DEKP35659 375 aaKnown RBP15.34■□□□□ 0.05
SLC11A1-205ENST00000468221 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
SLC11A1-205ENST00000468221 SPRYD3Q8NCJ5 442 aa15.33■□□□□ 0.04
SLC11A1-205ENST00000468221 HDGFL2Q7Z4V5 671 aaPredicted RBP15.33■□□□□ 0.04
SLC11A1-205ENST00000468221 RWDD1Q9H446 243 aaPredicted RBP15.33■□□□□ 0.04
SLC11A1-205ENST00000468221 SYAP1Q96A49 352 aaPredicted RBP15.32■□□□□ 0.04
SLC11A1-205ENST00000468221 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
SLC11A1-205ENST00000468221 SOX12O15370 315 aa15.3■□□□□ 0.04
SLC11A1-205ENST00000468221 TPM4P67936 248 aa15.29■□□□□ 0.04
SLC11A1-205ENST00000468221 TCERG1O14776 1098 aaKnown RBP15.28■□□□□ 0.04
SLC11A1-205ENST00000468221 CCDC34Q96HJ3 373 aa15.28■□□□□ 0.04
SLC11A1-205ENST00000468221 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
SLC11A1-205ENST00000468221 HSPA5P11021 654 aaKnown RBP15.27■□□□□ 0.04
SLC11A1-205ENST00000468221 RALBP1Q15311 655 aa15.27■□□□□ 0.04
SLC11A1-205ENST00000468221 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
SLC11A1-205ENST00000468221 HDAC5Q9UQL6 1122 aa15.26■□□□□ 0.03
SLC11A1-205ENST00000468221 APBB1O00213 710 aa15.26■□□□□ 0.03
SLC11A1-205ENST00000468221 PMFBP1Q8TBY8 1022 aa15.26■□□□□ 0.03
SLC11A1-205ENST00000468221 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
SLC11A1-205ENST00000468221 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
SLC11A1-205ENST00000468221 NOC3LQ8WTT2 800 aaKnown RBP15.25■□□□□ 0.03
SLC11A1-205ENST00000468221 U2AF1L5P0DN76 240 aaPredicted RBP15.24■□□□□ 0.03
SLC11A1-205ENST00000468221 U2AF1Q01081 240 aaKnown RBP eCLIP15.24■□□□□ 0.03
SLC11A1-205ENST00000468221 SAFB2Q14151 953 aaKnown RBP eCLIP15.24■□□□□ 0.03
SLC11A1-205ENST00000468221 CSPP1Q1MSJ5 1256 aa15.23■□□□□ 0.03
SLC11A1-205ENST00000468221 GPATCH3Q96I76 525 aa15.23■□□□□ 0.03
SLC11A1-205ENST00000468221 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
SLC11A1-205ENST00000468221 STK31Q9BXU1 1019 aa15.22■□□□□ 0.03
SLC11A1-205ENST00000468221 HMMRO75330 724 aa15.21■□□□□ 0.03
SLC11A1-205ENST00000468221 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.02
SLC11A1-205ENST00000468221 PKD2Q13563 968 aa15.21■□□□□ 0.02
SLC11A1-205ENST00000468221 ARHGAP35Q9NRY4 1499 aa15.2■□□□□ 0.02
SLC11A1-205ENST00000468221 SLKQ9H2G2 1235 aaPredicted RBP15.2■□□□□ 0.02
SLC11A1-205ENST00000468221 GOLGA6L3A6NEY3 463 aa15.2■□□□□ 0.02
SLC11A1-205ENST00000468221 MLECQ14165 292 aa15.2■□□□□ 0.02
SLC11A1-205ENST00000468221 EIF3AQ14152 1382 aaKnown RBP15.19■□□□□ 0.02
SLC11A1-205ENST00000468221 CARMIL1Q5VZK9 1371 aa15.19■□□□□ 0.02
SLC11A1-205ENST00000468221 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
SLC11A1-205ENST00000468221 ROCK2O75116 1388 aaKnown RBP15.19■□□□□ 0.02
SLC11A1-205ENST00000468221 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
SLC11A1-205ENST00000468221 GZF1Q9H116 711 aaPredicted RBP15.19■□□□□ 0.02
SLC11A1-205ENST00000468221 STK26Q9P289 416 aa15.19■□□□□ 0.02
SLC11A1-205ENST00000468221 TMX4Q9H1E5 349 aaPredicted RBP15.18■□□□□ 0.02
SLC11A1-205ENST00000468221 USP35Q9P2H5 1018 aa15.18■□□□□ 0.02
SLC11A1-205ENST00000468221 CSB-PGBD3P0DP91 1061 aa15.18■□□□□ 0.02
SLC11A1-205ENST00000468221 GOLGA6L1Q8N7Z2 621 aa15.18■□□□□ 0.02
SLC11A1-205ENST00000468221 GGT6Q6P531 493 aa15.17■□□□□ 0.02
SLC11A1-205ENST00000468221 HSP90B1P14625 803 aaKnown RBP15.16■□□□□ 0.02
SLC11A1-205ENST00000468221 MFAP1P55081 439 aaKnown RBP15.16■□□□□ 0.02
SLC11A1-205ENST00000468221 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
SLC11A1-205ENST00000468221 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
SLC11A1-205ENST00000468221 SMC4Q9NTJ3 1288 aa15.15■□□□□ 0.02
SLC11A1-205ENST00000468221 ZNF330Q9Y3S2 320 aaPredicted RBP15.15■□□□□ 0.02
SLC11A1-205ENST00000468221 TNNT3P45378 269 aaPredicted RBP15.14■□□□□ 0.01
SLC11A1-205ENST00000468221 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
SLC11A1-205ENST00000468221 PHF14O94880 888 aa15.14■□□□□ 0.01
SLC11A1-205ENST00000468221 TAF7LQ5H9L4 462 aa15.14■□□□□ 0.01
SLC11A1-205ENST00000468221 KIF3AQ9Y496 699 aa15.14■□□□□ 0.01
SLC11A1-205ENST00000468221 LMOD3Q0VAK6 560 aa15.13■□□□□ 0.01
SLC11A1-205ENST00000468221 PDE3BQ13370 1112 aa15.13■□□□□ 0.01
SLC11A1-205ENST00000468221 TERF2IPQ9NYB0 399 aa15.13■□□□□ 0.01
SLC11A1-205ENST00000468221 AMER1Q5JTC6 1135 aaPredicted RBP15.13■□□□□ 0.01
SLC11A1-205ENST00000468221 CUX2O14529 1486 aa15.12■□□□□ 0.01
SLC11A1-205ENST00000468221 A0A0U1RQG5 324 aaPredicted RBP15.12■□□□□ 0.01
SLC11A1-205ENST00000468221 IPO9Q96P70 1041 aaKnown RBP15.12■□□□□ 0.01
SLC11A1-205ENST00000468221 RASSF8Q8NHQ8 419 aa15.12■□□□□ 0.01
SLC11A1-205ENST00000468221 CHMP3Q9Y3E7 222 aa15.11■□□□□ 0.01
SLC11A1-205ENST00000468221 ST18O60284 1047 aa15.11■□□□□ 0.01
SLC11A1-205ENST00000468221 CARMIL2Q6F5E8 1435 aa15.1■□□□□ 0.01
SLC11A1-205ENST00000468221 TPM3P06753 285 aa15.1■□□□□ 0.01
SLC11A1-205ENST00000468221 VPS8Q8N3P4 1428 aa15.1■□□□□ 0.01
SLC11A1-205ENST00000468221 ANKRD30AQ9BXX3 1397 aa15.1■□□□□ 0.01
SLC11A1-205ENST00000468221 MPHOSPH9Q99550 1183 aa15.1■□□□□ 0.01
SLC11A1-205ENST00000468221 CENPJQ9HC77 1338 aaPredicted RBP15.09■□□□□ 0.01
SLC11A1-205ENST00000468221 NUP155O75694 1391 aa15.09■□□□□ 0.01
SLC11A1-205ENST00000468221 KIF16BQ96L93 1317 aa15.09■□□□□ 0.01
SLC11A1-205ENST00000468221 TRHP20396 242 aaPredicted RBP15.09■□□□□ 0.01
SLC11A1-205ENST00000468221 CHMP4CQ96CF2 233 aa15.08■□□□□ 0
SLC11A1-205ENST00000468221 PHLDB1Q86UU1 1377 aa15.08■□□□□ 0
SLC11A1-205ENST00000468221 CEP89Q96ST8 783 aa15.08■□□□□ 0
SLC11A1-205ENST00000468221 NLRP13Q86W25 1043 aa15.07■□□□□ 0
SLC11A1-205ENST00000468221 EFCAB2Q5VUJ9 269 aa15.07■□□□□ 0
SLC11A1-205ENST00000468221 DDX11L8A8MPP1 907 aa15.06■□□□□ 0
SLC11A1-205ENST00000468221 ARID3AQ99856 593 aa15.06■□□□□ 0
SLC11A1-205ENST00000468221 FOXD1Q16676 465 aa15.05■□□□□ 0
SLC11A1-205ENST00000468221 SLC4A10Q6U841 1118 aa15.05■□□□□ 0
SLC11A1-205ENST00000468221 SF3A1Q15459 793 aaKnown RBP15.05■□□□□ -0
SLC11A1-205ENST00000468221 SMARCA4P51532 1647 aa15.04■□□□□ -0
SLC11A1-205ENST00000468221 PRM3Q9NNZ6 103 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms