RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 DAPK1P53355 1430 aa14.93□□□□□ -0.02
MSH5-213ENST00000468136 PTPRKQ15262 1439 aa14.93□□□□□ -0.02
MSH5-213ENST00000468136 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
MSH5-213ENST00000468136 CAMSAP2Q08AD1 1489 aa14.91□□□□□ -0.02
MSH5-213ENST00000468136 ABCC5O15440 1437 aa14.91□□□□□ -0.02
MSH5-213ENST00000468136 GCC2Q8IWJ2 1684 aa14.9□□□□□ -0.02
MSH5-213ENST00000468136 PLEKHH2Q8IVE3 1493 aa14.9□□□□□ -0.02
MSH5-213ENST00000468136 SHANK2Q9UPX8 1470 aa14.9□□□□□ -0.02
MSH5-213ENST00000468136 ADGRL2O95490 1459 aa14.89□□□□□ -0.03
MSH5-213ENST00000468136 CDC42BPAQ5VT25 1732 aa14.86□□□□□ -0.03
MSH5-213ENST00000468136 ARHGEF5Q12774 1597 aa14.86□□□□□ -0.03
MSH5-213ENST00000468136 ARAP3Q8WWN8 1544 aa14.86□□□□□ -0.03
MSH5-213ENST00000468136 ANKRD30AQ9BXX3 1397 aa14.85□□□□□ -0.03
MSH5-213ENST00000468136 PREX2Q70Z35 1606 aa14.85□□□□□ -0.03
MSH5-213ENST00000468136 KIAA1107Q9UPP5 1409 aa14.85□□□□□ -0.03
MSH5-213ENST00000468136 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
MSH5-213ENST00000468136 TSPY4P0CV99 314 aa14.84□□□□□ -0.03
MSH5-213ENST00000468136 TSPY10P0CW01 314 aa14.84□□□□□ -0.03
MSH5-213ENST00000468136 MAPKBP1O60336 1514 aa14.83□□□□□ -0.04
MSH5-213ENST00000468136 ADGBQ8N7X0 1667 aa14.82□□□□□ -0.04
MSH5-213ENST00000468136 NCOA1Q15788 1441 aa14.82□□□□□ -0.04
MSH5-213ENST00000468136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.04
MSH5-213ENST00000468136 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
MSH5-213ENST00000468136 ZNF644Q9H582 1327 aaPredicted RBP14.81□□□□□ -0.04
MSH5-213ENST00000468136 PLCH2O75038 1416 aa14.81□□□□□ -0.04
MSH5-213ENST00000468136 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
MSH5-213ENST00000468136 RRP7BPQ9NSQ0 103 aa14.8□□□□□ -0.04
MSH5-213ENST00000468136 CHIC2Q9UKJ5 165 aa14.8□□□□□ -0.04
MSH5-213ENST00000468136 ZNF777Q9ULD5 760 aaPredicted RBP14.8□□□□□ -0.04
MSH5-213ENST00000468136 CCDC141Q6ZP82 1450 aa14.8□□□□□ -0.04
MSH5-213ENST00000468136 WDR7Q9Y4E6 1490 aa14.8□□□□□ -0.04
MSH5-213ENST00000468136 EFCAB2Q5VUJ9 269 aa14.79□□□□□ -0.04
MSH5-213ENST00000468136 MYO5CQ9NQX4 1742 aa14.79□□□□□ -0.04
MSH5-213ENST00000468136 MBD5Q9P267 1494 aa14.78□□□□□ -0.04
MSH5-213ENST00000468136 C9orf84Q5VXU9 1444 aa14.78□□□□□ -0.04
MSH5-213ENST00000468136 ARHGAP5Q13017 1502 aa14.77□□□□□ -0.04
MSH5-213ENST00000468136 MAST1Q9Y2H9 1570 aa14.77□□□□□ -0.05
MSH5-213ENST00000468136 CDC42BPBQ9Y5S2 1711 aa14.76□□□□□ -0.05
MSH5-213ENST00000468136 ZNF316A6NFI3 1004 aaPredicted RBP14.76□□□□□ -0.05
MSH5-213ENST00000468136 TTC37Q6PGP7 1564 aa14.75□□□□□ -0.05
MSH5-213ENST00000468136 SAMD9LQ8IVG5 1584 aa14.75□□□□□ -0.05
MSH5-213ENST00000468136 TRIM52Q96A61 297 aa14.73□□□□□ -0.05
MSH5-213ENST00000468136 ANKRD50Q9ULJ7 1429 aa14.73□□□□□ -0.05
MSH5-213ENST00000468136 KCNH8Q96L42 1107 aa14.72□□□□□ -0.05
MSH5-213ENST00000468136 MPHOSPH9Q99550 1183 aa14.72□□□□□ -0.05
MSH5-213ENST00000468136 ABCA9Q8IUA7 1624 aa14.71□□□□□ -0.05
MSH5-213ENST00000468136 ASXL2Q76L83 1435 aa14.71□□□□□ -0.05
MSH5-213ENST00000468136 RTEL1-TNFRSF6BF6WH68 1400 aa14.69□□□□□ -0.06
MSH5-213ENST00000468136 HNRNPMP52272 730 aaKnown RBP eCLIP14.69□□□□□ -0.06
MSH5-213ENST00000468136 TONSLQ96HA7 1378 aa14.69□□□□□ -0.06
MSH5-213ENST00000468136 KIF15Q9NS87 1388 aa14.69□□□□□ -0.06
MSH5-213ENST00000468136 SYCP2Q9BX26 1530 aa14.68□□□□□ -0.06
MSH5-213ENST00000468136 KDM5DQ9BY66 1539 aa14.68□□□□□ -0.06
MSH5-213ENST00000468136 PLXNC1O60486 1568 aa14.68□□□□□ -0.06
MSH5-213ENST00000468136 ABCC1P33527 1531 aa14.67□□□□□ -0.06
MSH5-213ENST00000468136 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
MSH5-213ENST00000468136 KDM6BO15054 1643 aa14.65□□□□□ -0.06
MSH5-213ENST00000468136 CFAP74Q9C0B2 1584 aa14.64□□□□□ -0.07
MSH5-213ENST00000468136 PPP1R15AO75807 674 aaPredicted RBP14.64□□□□□ -0.07
MSH5-213ENST00000468136 DUOX2Q9NRD8 1548 aa14.64□□□□□ -0.07
MSH5-213ENST00000468136 ERBINQ96RT1 1412 aa14.64□□□□□ -0.07
MSH5-213ENST00000468136 ANKRD30BQ9BXX2 1392 aa14.63□□□□□ -0.07
MSH5-213ENST00000468136 NEUROD1Q13562 356 aa14.63□□□□□ -0.07
MSH5-213ENST00000468136 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
MSH5-213ENST00000468136 FANCAO15360 1455 aa14.63□□□□□ -0.07
MSH5-213ENST00000468136 PZPP20742 1482 aa14.62□□□□□ -0.07
MSH5-213ENST00000468136 DIEXFQ68CQ4 756 aaKnown RBP14.61□□□□□ -0.07
MSH5-213ENST00000468136 DENND4BO75064 1496 aaPredicted RBP14.61□□□□□ -0.07
MSH5-213ENST00000468136 SPAG9O60271 1321 aaKnown RBP14.6□□□□□ -0.07
MSH5-213ENST00000468136 NUP155O75694 1391 aa14.6□□□□□ -0.07
MSH5-213ENST00000468136 RPRD2Q5VT52 1461 aaKnown RBP14.59□□□□□ -0.07
MSH5-213ENST00000468136 ARHGEF12Q9NZN5 1544 aa14.59□□□□□ -0.07
MSH5-213ENST00000468136 CD109Q6YHK3 1445 aa14.58□□□□□ -0.08
MSH5-213ENST00000468136 ADGRL1O94910 1474 aa14.57□□□□□ -0.08
MSH5-213ENST00000468136 NEO1Q92859 1461 aa14.57□□□□□ -0.08
MSH5-213ENST00000468136 UNC13BO14795 1591 aa14.56□□□□□ -0.08
MSH5-213ENST00000468136 TRAPPC8Q9Y2L5 1435 aa14.56□□□□□ -0.08
MSH5-213ENST00000468136 SCAPERQ9BY12 1400 aa14.55□□□□□ -0.08
MSH5-213ENST00000468136 ZNF518AQ6AHZ1 1483 aa14.55□□□□□ -0.08
MSH5-213ENST00000468136 MAGI2Q86UL8 1455 aa14.55□□□□□ -0.08
MSH5-213ENST00000468136 GLI2P10070 1586 aa14.55□□□□□ -0.08
MSH5-213ENST00000468136 PKD2Q13563 968 aa14.54□□□□□ -0.08
MSH5-213ENST00000468136 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
MSH5-213ENST00000468136 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
MSH5-213ENST00000468136 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
MSH5-213ENST00000468136 ZFYVE16Q7Z3T8 1539 aa14.53□□□□□ -0.08
MSH5-213ENST00000468136 FAM135AQ9P2D6 1515 aa14.51□□□□□ -0.09
MSH5-213ENST00000468136 INO80Q9ULG1 1556 aaPredicted RBP14.51□□□□□ -0.09
MSH5-213ENST00000468136 ATP7AQ04656 1500 aa14.51□□□□□ -0.09
MSH5-213ENST00000468136 CYB5RLQ6IPT4 315 aa14.5□□□□□ -0.09
MSH5-213ENST00000468136 IQGAP3Q86VI3 1631 aa14.5□□□□□ -0.09
MSH5-213ENST00000468136 EIF2AK4Q9P2K8 1649 aaKnown RBP14.49□□□□□ -0.09
MSH5-213ENST00000468136 ATP10AO60312 1499 aa14.49□□□□□ -0.09
MSH5-213ENST00000468136 MLH3Q9UHC1 1453 aa14.49□□□□□ -0.09
MSH5-213ENST00000468136 KANK1Q14678 1352 aa14.48□□□□□ -0.09
MSH5-213ENST00000468136 DHX29Q7Z478 1369 aaKnown RBP14.48□□□□□ -0.09
MSH5-213ENST00000468136 AFAP1Q8N556 730 aa14.48□□□□□ -0.09
MSH5-213ENST00000468136 POGZQ7Z3K3 1410 aa14.48□□□□□ -0.09
MSH5-213ENST00000468136 KDM5CP41229 1560 aa14.47□□□□□ -0.09
MSH5-213ENST00000468136 TEX14Q8IWB6 1497 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms