RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 HSPA5P11021 654 aaKnown RBP20.21■□□□□ 0.83
SEC16A-208ENST00000467838 NCOA1Q15788 1441 aa20.21■□□□□ 0.83
SEC16A-208ENST00000467838 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
SEC16A-208ENST00000467838 CHD1O14646 1710 aa20.2■□□□□ 0.82
SEC16A-208ENST00000467838 CDK13Q14004 1512 aaKnown RBP20.19■□□□□ 0.82
SEC16A-208ENST00000467838 DNMT1P26358 1616 aaKnown RBP20.19■□□□□ 0.82
SEC16A-208ENST00000467838 TEX14Q8IWB6 1497 aa20.18■□□□□ 0.82
SEC16A-208ENST00000467838 RRP7BPQ9NSQ0 103 aa20.17■□□□□ 0.82
SEC16A-208ENST00000467838 RPRD2Q5VT52 1461 aaKnown RBP20.17■□□□□ 0.82
SEC16A-208ENST00000467838 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
SEC16A-208ENST00000467838 ERICH6BQ5W0A0 696 aa20.15■□□□□ 0.82
SEC16A-208ENST00000467838 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
SEC16A-208ENST00000467838 DAPK1P53355 1430 aa20.13■□□□□ 0.81
SEC16A-208ENST00000467838 MPHOSPH9Q99550 1183 aa20.13■□□□□ 0.81
SEC16A-208ENST00000467838 CCDC7Q96M83 1385 aa20.13■□□□□ 0.81
SEC16A-208ENST00000467838 ANKRD30BQ9BXX2 1392 aa20.13■□□□□ 0.81
SEC16A-208ENST00000467838 SPATA31E1Q6ZUB1 1445 aa20.1■□□□□ 0.81
SEC16A-208ENST00000467838 DISP1Q96F81 1524 aa20.1■□□□□ 0.81
SEC16A-208ENST00000467838 KIAA0556O60303 1618 aa20.1■□□□□ 0.81
SEC16A-208ENST00000467838 CHIC2Q9UKJ5 165 aa20.09■□□□□ 0.81
SEC16A-208ENST00000467838 L3MBTL2Q969R5 705 aa20.08■□□□□ 0.81
SEC16A-208ENST00000467838 ABCC5O15440 1437 aa20.08■□□□□ 0.8
SEC16A-208ENST00000467838 JPH4Q96JJ6 628 aa20.07■□□□□ 0.8
SEC16A-208ENST00000467838 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
SEC16A-208ENST00000467838 PRKRIP1Q9H875 184 aaPredicted RBP20.04■□□□□ 0.8
SEC16A-208ENST00000467838 NUP153P49790 1475 aaKnown RBP20.03■□□□□ 0.8
SEC16A-208ENST00000467838 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
SEC16A-208ENST00000467838 ADGBQ8N7X0 1667 aa20.03■□□□□ 0.8
SEC16A-208ENST00000467838 RAPGEF6Q8TEU7 1601 aa20.03■□□□□ 0.8
SEC16A-208ENST00000467838 C11orf95C9JLR9 678 aaPredicted RBP20.02■□□□□ 0.8
SEC16A-208ENST00000467838 ZBED9Q6R2W3 1325 aa20.02■□□□□ 0.79
SEC16A-208ENST00000467838 CARMIL2Q6F5E8 1435 aa20.01■□□□□ 0.79
SEC16A-208ENST00000467838 PZPP20742 1482 aa20■□□□□ 0.79
SEC16A-208ENST00000467838 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
SEC16A-208ENST00000467838 CROCC2H7BZ55 1655 aa19.99■□□□□ 0.79
SEC16A-208ENST00000467838 NBPF8Q3BBV2 869 aa19.99■□□□□ 0.79
SEC16A-208ENST00000467838 CCDC184Q52MB2 194 aa19.99■□□□□ 0.79
SEC16A-208ENST00000467838 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
SEC16A-208ENST00000467838 ADGRL2O95490 1459 aa19.97■□□□□ 0.79
SEC16A-208ENST00000467838 PPP4R2Q9NY27 417 aa19.97■□□□□ 0.79
SEC16A-208ENST00000467838 CDK11AQ9UQ88 783 aaPredicted RBP19.97■□□□□ 0.79
SEC16A-208ENST00000467838 KIF7Q2M1P5 1343 aa19.96■□□□□ 0.79
SEC16A-208ENST00000467838 PRG4Q92954 1404 aaPredicted RBP19.96■□□□□ 0.79
SEC16A-208ENST00000467838 MSH5O43196 834 aa19.95■□□□□ 0.78
SEC16A-208ENST00000467838 KIF14Q15058 1648 aa19.95■□□□□ 0.78
SEC16A-208ENST00000467838 SHROOM2Q13796 1616 aa19.95■□□□□ 0.78
SEC16A-208ENST00000467838 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
SEC16A-208ENST00000467838 FOXD1Q16676 465 aa19.94■□□□□ 0.78
SEC16A-208ENST00000467838 CAMSAP2Q08AD1 1489 aa19.93■□□□□ 0.78
SEC16A-208ENST00000467838 TROQ12816 1431 aaPredicted RBP19.92■□□□□ 0.78
SEC16A-208ENST00000467838 MRS2Q9HD23 443 aa19.92■□□□□ 0.78
SEC16A-208ENST00000467838 DHX29Q7Z478 1369 aaKnown RBP19.91■□□□□ 0.78
SEC16A-208ENST00000467838 IRX6P78412 446 aaPredicted RBP19.91■□□□□ 0.78
SEC16A-208ENST00000467838 KDM5CP41229 1560 aa19.9■□□□□ 0.78
SEC16A-208ENST00000467838 KIAA1107Q9UPP5 1409 aa19.89■□□□□ 0.78
SEC16A-208ENST00000467838 BCORL1Q5H9F3 1711 aa19.89■□□□□ 0.78
SEC16A-208ENST00000467838 SLC4A1APQ9BWU0 796 aaKnown RBP19.88■□□□□ 0.77
SEC16A-208ENST00000467838 SMG6Q86US8 1419 aaKnown RBP19.88■□□□□ 0.77
SEC16A-208ENST00000467838 ZNF644Q9H582 1327 aaPredicted RBP19.87■□□□□ 0.77
SEC16A-208ENST00000467838 GPATCH8Q9UKJ3 1502 aaKnown RBP19.86■□□□□ 0.77
SEC16A-208ENST00000467838 ARID4BQ4LE39 1312 aaPredicted RBP19.86■□□□□ 0.77
SEC16A-208ENST00000467838 PLB1Q6P1J6 1458 aa19.85■□□□□ 0.77
SEC16A-208ENST00000467838 UHRF1BP1Q6BDS2 1440 aa19.85■□□□□ 0.77
SEC16A-208ENST00000467838 FAM9BQ8IZU0 186 aa19.84■□□□□ 0.77
SEC16A-208ENST00000467838 ERCC6L2Q5T890 1561 aa19.84■□□□□ 0.77
SEC16A-208ENST00000467838 ARHGEF12Q9NZN5 1544 aa19.84■□□□□ 0.77
SEC16A-208ENST00000467838 ARID3CA6NKF2 412 aa19.83■□□□□ 0.77
SEC16A-208ENST00000467838 KDM5DQ9BY66 1539 aa19.83■□□□□ 0.77
SEC16A-208ENST00000467838 RALGAPBQ86X10 1494 aa19.83■□□□□ 0.76
SEC16A-208ENST00000467838 SHANK2Q9UPX8 1470 aa19.83■□□□□ 0.76
SEC16A-208ENST00000467838 PTPRGP23470 1445 aa19.82■□□□□ 0.76
SEC16A-208ENST00000467838 USP47Q96K76 1375 aa19.82■□□□□ 0.76
SEC16A-208ENST00000467838 RNF123Q5XPI4 1314 aa19.81■□□□□ 0.76
SEC16A-208ENST00000467838 ABCA8O94911 1581 aa19.8■□□□□ 0.76
SEC16A-208ENST00000467838 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
SEC16A-208ENST00000467838 CDC42BPAQ5VT25 1732 aa19.79■□□□□ 0.76
SEC16A-208ENST00000467838 ROCK2O75116 1388 aaKnown RBP19.78■□□□□ 0.76
SEC16A-208ENST00000467838 ANKRD30AQ9BXX3 1397 aa19.77■□□□□ 0.75
SEC16A-208ENST00000467838 BCL11AQ9H165 835 aa19.76■□□□□ 0.75
SEC16A-208ENST00000467838 E9PCH4 1651 aa19.75■□□□□ 0.75
SEC16A-208ENST00000467838 CFDP1Q9UEE9 299 aaPredicted RBP19.75■□□□□ 0.75
SEC16A-208ENST00000467838 ANKRD50Q9ULJ7 1429 aa19.74■□□□□ 0.75
SEC16A-208ENST00000467838 B4GALNT3Q6L9W6 998 aa19.73■□□□□ 0.75
SEC16A-208ENST00000467838 NUDCQ9Y266 331 aa19.73■□□□□ 0.75
SEC16A-208ENST00000467838 ABCC10Q5T3U5 1492 aa19.72■□□□□ 0.75
SEC16A-208ENST00000467838 KTN1Q86UP2 1357 aaKnown RBP19.7■□□□□ 0.74
SEC16A-208ENST00000467838 PKD2Q13563 968 aa19.69■□□□□ 0.74
SEC16A-208ENST00000467838 ARHGEF5Q12774 1597 aa19.69■□□□□ 0.74
SEC16A-208ENST00000467838 LRPPRCP42704 1394 aaKnown RBP19.68■□□□□ 0.74
SEC16A-208ENST00000467838 MYT1LQ9UL68 1186 aa19.68■□□□□ 0.74
SEC16A-208ENST00000467838 C9orf84Q5VXU9 1444 aa19.67■□□□□ 0.74
SEC16A-208ENST00000467838 ATP10BO94823 1461 aa19.67■□□□□ 0.74
SEC16A-208ENST00000467838 ERICH6Q7L0X2 663 aa19.67■□□□□ 0.74
SEC16A-208ENST00000467838 KIF15Q9NS87 1388 aa19.66■□□□□ 0.74
SEC16A-208ENST00000467838 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
SEC16A-208ENST00000467838 ABCC2Q92887 1545 aa19.65■□□□□ 0.74
SEC16A-208ENST00000467838 BRD4O60885 1362 aaPredicted RBP19.63■□□□□ 0.73
SEC16A-208ENST00000467838 NUP155O75694 1391 aa19.6■□□□□ 0.73
SEC16A-208ENST00000467838 PLEKHD1A6NEE1 506 aa19.59■□□□□ 0.73
SEC16A-208ENST00000467838 TRPM1Q7Z4N2 1603 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms