RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 ZNF777Q9ULD5 760 aaPredicted RBP27.82■■■□□ 2.04
CHRNA4-203ENST00000467563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.8■■■□□ 2.04
CHRNA4-203ENST00000467563 CLSPNQ9HAW4 1339 aa27.8■■■□□ 2.04
CHRNA4-203ENST00000467563 TTC37Q6PGP7 1564 aa27.79■■■□□ 2.04
CHRNA4-203ENST00000467563 RRP7BPQ9NSQ0 103 aa27.77■■■□□ 2.04
CHRNA4-203ENST00000467563 AKNAQ7Z591 1439 aa27.77■■■□□ 2.04
CHRNA4-203ENST00000467563 KCNH8Q96L42 1107 aa27.77■■■□□ 2.04
CHRNA4-203ENST00000467563 PREX2Q70Z35 1606 aa27.75■■■□□ 2.03
CHRNA4-203ENST00000467563 CDC42BPBQ9Y5S2 1711 aa27.73■■■□□ 2.03
CHRNA4-203ENST00000467563 ROCK1Q13464 1354 aa27.71■■■□□ 2.03
CHRNA4-203ENST00000467563 GCC2Q8IWJ2 1684 aa27.71■■■□□ 2.03
CHRNA4-203ENST00000467563 MAPKBP1O60336 1514 aa27.69■■■□□ 2.02
CHRNA4-203ENST00000467563 WDR7Q9Y4E6 1490 aa27.68■■■□□ 2.02
CHRNA4-203ENST00000467563 SAMD9LQ8IVG5 1584 aa27.67■■■□□ 2.02
CHRNA4-203ENST00000467563 MYO5CQ9NQX4 1742 aa27.65■■■□□ 2.02
CHRNA4-203ENST00000467563 CROCC2H7BZ55 1655 aa27.65■■■□□ 2.02
CHRNA4-203ENST00000467563 ARHGAP5Q13017 1502 aa27.65■■■□□ 2.02
CHRNA4-203ENST00000467563 KDM6BO15054 1643 aa27.64■■■□□ 2.02
CHRNA4-203ENST00000467563 MBD5Q9P267 1494 aa27.62■■■□□ 2.01
CHRNA4-203ENST00000467563 ASXL2Q76L83 1435 aa27.62■■■□□ 2.01
CHRNA4-203ENST00000467563 HNRNPMP52272 730 aaKnown RBP eCLIP27.61■■■□□ 2.01
CHRNA4-203ENST00000467563 PLCH2O75038 1416 aa27.61■■■□□ 2.01
CHRNA4-203ENST00000467563 NCOA1Q15788 1441 aa27.6■■■□□ 2.01
CHRNA4-203ENST00000467563 ADGRL2O95490 1459 aa27.6■■■□□ 2.01
CHRNA4-203ENST00000467563 ARHGEF5Q12774 1597 aa27.59■■■□□ 2.01
CHRNA4-203ENST00000467563 SHANK2Q9UPX8 1470 aa27.58■■■□□ 2.01
CHRNA4-203ENST00000467563 ADGBQ8N7X0 1667 aa27.58■■■□□ 2.01
CHRNA4-203ENST00000467563 NPM1P06748 294 aaKnown RBP eCLIP27.58■■■□□ 2.01
CHRNA4-203ENST00000467563 C9orf84Q5VXU9 1444 aa27.55■■■□□ 2
CHRNA4-203ENST00000467563 SYCP2Q9BX26 1530 aa27.55■■■□□ 2
CHRNA4-203ENST00000467563 ANKRD30AQ9BXX3 1397 aa27.53■■■□□ 2
CHRNA4-203ENST00000467563 CCDC141Q6ZP82 1450 aa27.53■■■□□ 2
CHRNA4-203ENST00000467563 RIMBP3CA6NJZ7 1639 aa27.53■■■□□ 2
CHRNA4-203ENST00000467563 RIMBP3BA6NNM3 1639 aa27.53■■■□□ 2
CHRNA4-203ENST00000467563 RIMBP3Q9UFD9 1639 aa27.53■■■□□ 2
CHRNA4-203ENST00000467563 TSPY4P0CV99 314 aa27.52■■■□□ 2
CHRNA4-203ENST00000467563 TSPY10P0CW01 314 aa27.52■■■□□ 2
CHRNA4-203ENST00000467563 KIAA1107Q9UPP5 1409 aa27.51■■□□□ 1.99
CHRNA4-203ENST00000467563 ABCA9Q8IUA7 1624 aa27.51■■□□□ 1.99
CHRNA4-203ENST00000467563 EFCAB2Q5VUJ9 269 aa27.51■■□□□ 1.99
CHRNA4-203ENST00000467563 RSPH4AQ5TD94 716 aa27.5■■□□□ 1.99
CHRNA4-203ENST00000467563 PLEKHH2Q8IVE3 1493 aa27.5■■□□□ 1.99
CHRNA4-203ENST00000467563 ARAP3Q8WWN8 1544 aa27.49■■□□□ 1.99
CHRNA4-203ENST00000467563 CYB5RLQ6IPT4 315 aa27.48■■□□□ 1.99
CHRNA4-203ENST00000467563 ARHGEF12Q9NZN5 1544 aa27.48■■□□□ 1.99
CHRNA4-203ENST00000467563 TRIM52Q96A61 297 aa27.48■■□□□ 1.99
CHRNA4-203ENST00000467563 SIN3AQ96ST3 1273 aa27.45■■□□□ 1.98
CHRNA4-203ENST00000467563 ABCC1P33527 1531 aa27.44■■□□□ 1.98
CHRNA4-203ENST00000467563 DENND4BO75064 1496 aaPredicted RBP27.43■■□□□ 1.98
CHRNA4-203ENST00000467563 ANKRD50Q9ULJ7 1429 aa27.41■■□□□ 1.98
CHRNA4-203ENST00000467563 ACIN1Q9UKV3 1341 aaKnown RBP27.41■■□□□ 1.98
CHRNA4-203ENST00000467563 KIF15Q9NS87 1388 aa27.4■■□□□ 1.98
CHRNA4-203ENST00000467563 MAST1Q9Y2H9 1570 aa27.4■■□□□ 1.98
CHRNA4-203ENST00000467563 MPHOSPH9Q99550 1183 aa27.39■■□□□ 1.97
CHRNA4-203ENST00000467563 FANCAO15360 1455 aa27.39■■□□□ 1.97
CHRNA4-203ENST00000467563 NEUROD1Q13562 356 aa27.37■■□□□ 1.97
CHRNA4-203ENST00000467563 TRAPPC8Q9Y2L5 1435 aa27.36■■□□□ 1.97
CHRNA4-203ENST00000467563 PZPP20742 1482 aa27.3■■□□□ 1.96
CHRNA4-203ENST00000467563 CD109Q6YHK3 1445 aa27.3■■□□□ 1.96
CHRNA4-203ENST00000467563 PLXNC1O60486 1568 aa27.29■■□□□ 1.96
CHRNA4-203ENST00000467563 AFAP1Q8N556 730 aa27.28■■□□□ 1.96
CHRNA4-203ENST00000467563 SLC4A1APQ9BWU0 796 aaKnown RBP27.28■■□□□ 1.96
CHRNA4-203ENST00000467563 ADGRL1O94910 1474 aa27.27■■□□□ 1.96
CHRNA4-203ENST00000467563 FOXD1Q16676 465 aa27.26■■□□□ 1.95
CHRNA4-203ENST00000467563 TIMELESSQ9UNS1 1208 aa27.26■■□□□ 1.95
CHRNA4-203ENST00000467563 SCAPERQ9BY12 1400 aa27.24■■□□□ 1.95
CHRNA4-203ENST00000467563 SPAG9O60271 1321 aaKnown RBP27.22■■□□□ 1.95
CHRNA4-203ENST00000467563 NUP155O75694 1391 aa27.21■■□□□ 1.95
CHRNA4-203ENST00000467563 RTEL1-TNFRSF6BF6WH68 1400 aa27.2■■□□□ 1.95
CHRNA4-203ENST00000467563 ZFYVE16Q7Z3T8 1539 aa27.2■■□□□ 1.94
CHRNA4-203ENST00000467563 ANKRD30BQ9BXX2 1392 aa27.2■■□□□ 1.94
CHRNA4-203ENST00000467563 KDM5DQ9BY66 1539 aa27.19■■□□□ 1.94
CHRNA4-203ENST00000467563 DUOX2Q9NRD8 1548 aa27.19■■□□□ 1.94
CHRNA4-203ENST00000467563 ZNF316A6NFI3 1004 aaPredicted RBP27.19■■□□□ 1.94
CHRNA4-203ENST00000467563 TONSLQ96HA7 1378 aa27.17■■□□□ 1.94
CHRNA4-203ENST00000467563 CFAP74Q9C0B2 1584 aa27.16■■□□□ 1.94
CHRNA4-203ENST00000467563 INO80Q9ULG1 1556 aaPredicted RBP27.14■■□□□ 1.94
CHRNA4-203ENST00000467563 ERBINQ96RT1 1412 aa27.14■■□□□ 1.93
CHRNA4-203ENST00000467563 PKD2Q13563 968 aa27.13■■□□□ 1.93
CHRNA4-203ENST00000467563 ATP7AQ04656 1500 aa27.12■■□□□ 1.93
CHRNA4-203ENST00000467563 GLI2P10070 1586 aa27.12■■□□□ 1.93
CHRNA4-203ENST00000467563 MAP3K4Q9Y6R4 1608 aa27.12■■□□□ 1.93
CHRNA4-203ENST00000467563 PPP1R15AO75807 674 aaPredicted RBP27.12■■□□□ 1.93
CHRNA4-203ENST00000467563 UNC13BO14795 1591 aa27.11■■□□□ 1.93
CHRNA4-203ENST00000467563 ZNF518AQ6AHZ1 1483 aa27.09■■□□□ 1.93
CHRNA4-203ENST00000467563 NEO1Q92859 1461 aa27.09■■□□□ 1.93
CHRNA4-203ENST00000467563 FAM135AQ9P2D6 1515 aa27.08■■□□□ 1.93
CHRNA4-203ENST00000467563 DIP2BQ9P265 1576 aa27.07■■□□□ 1.92
CHRNA4-203ENST00000467563 POGZQ7Z3K3 1410 aa27.07■■□□□ 1.92
CHRNA4-203ENST00000467563 RPRD2Q5VT52 1461 aaKnown RBP27.07■■□□□ 1.92
CHRNA4-203ENST00000467563 FAM69CQ0P6D2 419 aa27.05■■□□□ 1.92
CHRNA4-203ENST00000467563 MAGI2Q86UL8 1455 aa27.04■■□□□ 1.92
CHRNA4-203ENST00000467563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.04■■□□□ 1.92
CHRNA4-203ENST00000467563 MYT1LQ9UL68 1186 aa27.03■■□□□ 1.92
CHRNA4-203ENST00000467563 KDM5CP41229 1560 aa27.03■■□□□ 1.92
CHRNA4-203ENST00000467563 KIDINS220Q9ULH0 1771 aa27.03■■□□□ 1.92
CHRNA4-203ENST00000467563 IQGAP3Q86VI3 1631 aa27■■□□□ 1.91
CHRNA4-203ENST00000467563 L3MBTL2Q969R5 705 aa26.97■■□□□ 1.91
CHRNA4-203ENST00000467563 DHX29Q7Z478 1369 aaKnown RBP26.97■■□□□ 1.91
CHRNA4-203ENST00000467563 MLH3Q9UHC1 1453 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms