RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 RBM19Q9Y4C8 960 aaKnown RBP29.65■■■□□ 2.34
LINC01140-202ENST00000467438 ABCC5O15440 1437 aa29.65■■■□□ 2.34
LINC01140-202ENST00000467438 ANKRD30BQ9BXX2 1392 aa29.63■■■□□ 2.33
LINC01140-202ENST00000467438 MRC2Q9UBG0 1479 aa29.62■■■□□ 2.33
LINC01140-202ENST00000467438 CNTLNQ9NXG0 1405 aa29.62■■■□□ 2.33
LINC01140-202ENST00000467438 DISP1Q96F81 1524 aa29.61■■■□□ 2.33
LINC01140-202ENST00000467438 SLC4A1APQ9BWU0 796 aaKnown RBP29.61■■■□□ 2.33
LINC01140-202ENST00000467438 NUP153P49790 1475 aaKnown RBP29.6■■■□□ 2.33
LINC01140-202ENST00000467438 ANP32EQ9BTT0 268 aa29.6■■■□□ 2.33
LINC01140-202ENST00000467438 CCDC7Q96M83 1385 aa29.59■■■□□ 2.33
LINC01140-202ENST00000467438 FAM9BQ8IZU0 186 aa29.57■■■□□ 2.32
LINC01140-202ENST00000467438 NCOA1Q15788 1441 aa29.56■■■□□ 2.32
LINC01140-202ENST00000467438 KIAA0556O60303 1618 aa29.56■■■□□ 2.32
LINC01140-202ENST00000467438 RPRD2Q5VT52 1461 aaKnown RBP29.56■■■□□ 2.32
LINC01140-202ENST00000467438 PRKRIP1Q9H875 184 aaPredicted RBP29.55■■■□□ 2.32
LINC01140-202ENST00000467438 ROCK1Q13464 1354 aa29.54■■■□□ 2.32
LINC01140-202ENST00000467438 TEX14Q8IWB6 1497 aa29.54■■■□□ 2.32
LINC01140-202ENST00000467438 DNMT1P26358 1616 aaKnown RBP29.53■■■□□ 2.32
LINC01140-202ENST00000467438 PRG4Q92954 1404 aaPredicted RBP29.52■■■□□ 2.32
LINC01140-202ENST00000467438 CNGB1Q14028 1251 aaPredicted RBP29.52■■■□□ 2.32
LINC01140-202ENST00000467438 KIAA0586Q9BVV6 1533 aa29.51■■■□□ 2.31
LINC01140-202ENST00000467438 ZNF777Q9ULD5 760 aaPredicted RBP29.5■■■□□ 2.31
LINC01140-202ENST00000467438 KIF7Q2M1P5 1343 aa29.5■■■□□ 2.31
LINC01140-202ENST00000467438 MRS2Q9HD23 443 aa29.49■■■□□ 2.31
LINC01140-202ENST00000467438 RAPGEF6Q8TEU7 1601 aa29.47■■■□□ 2.31
LINC01140-202ENST00000467438 IFT140Q96RY7 1462 aa29.45■■■□□ 2.31
LINC01140-202ENST00000467438 CFDP1Q9UEE9 299 aaPredicted RBP29.44■■■□□ 2.3
LINC01140-202ENST00000467438 SPATA31E1Q6ZUB1 1445 aa29.44■■■□□ 2.3
LINC01140-202ENST00000467438 ZNF326Q5BKZ1 582 aaKnown RBP29.43■■■□□ 2.3
LINC01140-202ENST00000467438 GRIN2AQ12879 1464 aa29.43■■■□□ 2.3
LINC01140-202ENST00000467438 CDK11AQ9UQ88 783 aaPredicted RBP29.42■■■□□ 2.3
LINC01140-202ENST00000467438 PZPP20742 1482 aa29.42■■■□□ 2.3
LINC01140-202ENST00000467438 PLB1Q6P1J6 1458 aa29.42■■■□□ 2.3
LINC01140-202ENST00000467438 CAMSAP2Q08AD1 1489 aa29.4■■■□□ 2.3
LINC01140-202ENST00000467438 POLR3GLQ9BT43 218 aa29.39■■■□□ 2.3
LINC01140-202ENST00000467438 FBLN2P98095 1184 aa29.39■■■□□ 2.29
LINC01140-202ENST00000467438 TROQ12816 1431 aaPredicted RBP29.35■■■□□ 2.29
LINC01140-202ENST00000467438 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
LINC01140-202ENST00000467438 KIF14Q15058 1648 aa29.35■■■□□ 2.29
LINC01140-202ENST00000467438 SENP3-EIF4A1A0A087X0R7 540 aa29.34■■■□□ 2.29
LINC01140-202ENST00000467438 GPATCH8Q9UKJ3 1502 aaKnown RBP29.34■■■□□ 2.29
LINC01140-202ENST00000467438 PKD2Q13563 968 aa29.33■■■□□ 2.29
LINC01140-202ENST00000467438 CHMP7Q8WUX9 453 aaPredicted RBP29.32■■■□□ 2.28
LINC01140-202ENST00000467438 MSH5O43196 834 aa29.32■■■□□ 2.28
LINC01140-202ENST00000467438 ZBED9Q6R2W3 1325 aa29.27■■■□□ 2.28
LINC01140-202ENST00000467438 CEP170Q5SW79 1584 aa29.27■■■□□ 2.28
LINC01140-202ENST00000467438 B4GALNT3Q6L9W6 998 aa29.25■■■□□ 2.27
LINC01140-202ENST00000467438 KIAA1107Q9UPP5 1409 aa29.25■■■□□ 2.27
LINC01140-202ENST00000467438 USP47Q96K76 1375 aa29.24■■■□□ 2.27
LINC01140-202ENST00000467438 BCORL1Q5H9F3 1711 aa29.24■■■□□ 2.27
LINC01140-202ENST00000467438 MBD5Q9P267 1494 aa29.23■■■□□ 2.27
LINC01140-202ENST00000467438 DHX29Q7Z478 1369 aaKnown RBP29.23■■■□□ 2.27
LINC01140-202ENST00000467438 PPP4R2Q9NY27 417 aa29.22■■■□□ 2.27
LINC01140-202ENST00000467438 POLR1AO95602 1720 aaPredicted RBP29.2■■■□□ 2.27
LINC01140-202ENST00000467438 JPH4Q96JJ6 628 aa29.2■■■□□ 2.26
LINC01140-202ENST00000467438 ADGBQ8N7X0 1667 aa29.19■■■□□ 2.26
LINC01140-202ENST00000467438 ITSN2Q9NZM3 1697 aa29.18■■■□□ 2.26
LINC01140-202ENST00000467438 ANKRD50Q9ULJ7 1429 aa29.18■■■□□ 2.26
LINC01140-202ENST00000467438 ANKRD30AQ9BXX3 1397 aa29.17■■■□□ 2.26
LINC01140-202ENST00000467438 ADGRL2O95490 1459 aa29.17■■■□□ 2.26
LINC01140-202ENST00000467438 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
LINC01140-202ENST00000467438 KDM2AQ9Y2K7 1162 aa29.15■■■□□ 2.26
LINC01140-202ENST00000467438 NUP155O75694 1391 aa29.14■■■□□ 2.26
LINC01140-202ENST00000467438 SYNJ2O15056 1496 aa29.12■■■□□ 2.25
LINC01140-202ENST00000467438 MAGI1Q96QZ7 1491 aaPredicted RBP29.11■■■□□ 2.25
LINC01140-202ENST00000467438 ADCY10Q96PN6 1610 aa29.11■■■□□ 2.25
LINC01140-202ENST00000467438 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
LINC01140-202ENST00000467438 ERICH6BQ5W0A0 696 aa29.11■■■□□ 2.25
LINC01140-202ENST00000467438 PLEKHD1A6NEE1 506 aa29.1■■■□□ 2.25
LINC01140-202ENST00000467438 KDM5CP41229 1560 aa29.09■■■□□ 2.25
LINC01140-202ENST00000467438 HNRNPMP52272 730 aaKnown RBP eCLIP29.09■■■□□ 2.25
LINC01140-202ENST00000467438 CARD11Q9BXL7 1154 aa29.08■■■□□ 2.25
LINC01140-202ENST00000467438 CARMIL2Q6F5E8 1435 aa29.07■■■□□ 2.24
LINC01140-202ENST00000467438 C9orf84Q5VXU9 1444 aa29.06■■■□□ 2.24
LINC01140-202ENST00000467438 CDC42BPAQ5VT25 1732 aa29.05■■■□□ 2.24
LINC01140-202ENST00000467438 ATP10BO94823 1461 aa29.04■■■□□ 2.24
LINC01140-202ENST00000467438 FANCIQ9NVI1 1328 aa29.04■■■□□ 2.24
LINC01140-202ENST00000467438 ST20-MTHFSA0A0A6YYL1 179 aa29.02■■■□□ 2.24
LINC01140-202ENST00000467438 ABCC10Q5T3U5 1492 aa29.02■■■□□ 2.24
LINC01140-202ENST00000467438 DCAF11Q8TEB1 546 aa29.02■■■□□ 2.24
LINC01140-202ENST00000467438 NUP160Q12769 1436 aa29.01■■■□□ 2.23
LINC01140-202ENST00000467438 TSPY4P0CV99 314 aa28.99■■■□□ 2.23
LINC01140-202ENST00000467438 TSPY10P0CW01 314 aa28.99■■■□□ 2.23
LINC01140-202ENST00000467438 PNISRQ8TF01 805 aaKnown RBP28.98■■■□□ 2.23
LINC01140-202ENST00000467438 SMG6Q86US8 1419 aaKnown RBP28.98■■■□□ 2.23
LINC01140-202ENST00000467438 UHRF1BP1Q6BDS2 1440 aa28.97■■■□□ 2.23
LINC01140-202ENST00000467438 RALGAPBQ86X10 1494 aa28.97■■■□□ 2.23
LINC01140-202ENST00000467438 NUDCQ9Y266 331 aa28.96■■■□□ 2.23
LINC01140-202ENST00000467438 ABCA8O94911 1581 aa28.96■■■□□ 2.23
LINC01140-202ENST00000467438 KIF15Q9NS87 1388 aa28.96■■■□□ 2.23
LINC01140-202ENST00000467438 TMC1Q8TDI8 760 aa28.95■■■□□ 2.23
LINC01140-202ENST00000467438 SHANK2Q9UPX8 1470 aa28.91■■■□□ 2.22
LINC01140-202ENST00000467438 ARID4BQ4LE39 1312 aaPredicted RBP28.9■■■□□ 2.22
LINC01140-202ENST00000467438 RGL3Q3MIN7 710 aa28.87■■■□□ 2.21
LINC01140-202ENST00000467438 ROCK2O75116 1388 aaKnown RBP28.85■■■□□ 2.21
LINC01140-202ENST00000467438 ARHGEF12Q9NZN5 1544 aa28.84■■■□□ 2.21
LINC01140-202ENST00000467438 ERICH6Q7L0X2 663 aa28.84■■■□□ 2.21
LINC01140-202ENST00000467438 SALL2Q9Y467 1007 aaPredicted RBP28.84■■■□□ 2.21
LINC01140-202ENST00000467438 KDM5DQ9BY66 1539 aa28.83■■■□□ 2.21
LINC01140-202ENST00000467438 RNF123Q5XPI4 1314 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms