RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 CYB5RLQ6IPT4 315 aa12.59□□□□□ -0.39
SND1-205ENST00000467238 CHMP7Q8WUX9 453 aaPredicted RBP12.59□□□□□ -0.39
SND1-205ENST00000467238 TIE1P35590 1138 aa12.58□□□□□ -0.4
SND1-205ENST00000467238 WRNQ14191 1432 aaPredicted RBP eCLIP12.56□□□□□ -0.4
SND1-205ENST00000467238 TTLL13PA6NNM8 815 aa12.55□□□□□ -0.4
SND1-205ENST00000467238 PROM2Q8N271 834 aa12.55□□□□□ -0.4
SND1-205ENST00000467238 ADAMTS12P58397 1594 aa12.53□□□□□ -0.4
SND1-205ENST00000467238 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
SND1-205ENST00000467238 GRIN2AQ12879 1464 aa12.51□□□□□ -0.41
SND1-205ENST00000467238 SEC24BO95487 1268 aa12.5□□□□□ -0.41
SND1-205ENST00000467238 ST18O60284 1047 aa12.49□□□□□ -0.41
SND1-205ENST00000467238 ERICH3Q5RHP9 1530 aa12.48□□□□□ -0.41
SND1-205ENST00000467238 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
SND1-205ENST00000467238 FHAD1B1AJZ9 1412 aa12.46□□□□□ -0.41
SND1-205ENST00000467238 NUP160Q12769 1436 aa12.46□□□□□ -0.41
SND1-205ENST00000467238 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
SND1-205ENST00000467238 SHROOM2Q13796 1616 aa12.44□□□□□ -0.42
SND1-205ENST00000467238 ERCC6L2Q5T890 1561 aa12.43□□□□□ -0.42
SND1-205ENST00000467238 IER5LQ5T953 404 aa12.42□□□□□ -0.42
SND1-205ENST00000467238 SLAIN1Q8ND83 568 aa12.42□□□□□ -0.42
SND1-205ENST00000467238 MMRN1Q13201 1228 aa12.39□□□□□ -0.43
SND1-205ENST00000467238 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
SND1-205ENST00000467238 RUSC2Q8N2Y8 1516 aa12.36□□□□□ -0.43
SND1-205ENST00000467238 PCDHB13Q9Y5F0 798 aa12.35□□□□□ -0.43
SND1-205ENST00000467238 MIER1Q8N108 512 aa12.34□□□□□ -0.43
SND1-205ENST00000467238 CUL7Q14999 1698 aa12.34□□□□□ -0.43
SND1-205ENST00000467238 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
SND1-205ENST00000467238 KIF27Q86VH2 1401 aa12.32□□□□□ -0.44
SND1-205ENST00000467238 PRG4Q92954 1404 aaPredicted RBP12.31□□□□□ -0.44
SND1-205ENST00000467238 IFNL1Q8IU54 200 aa12.31□□□□□ -0.44
SND1-205ENST00000467238 IGF1RP08069 1367 aa12.3□□□□□ -0.44
SND1-205ENST00000467238 JPH4Q96JJ6 628 aa12.29□□□□□ -0.44
SND1-205ENST00000467238 KIF13AQ9H1H9 1805 aa12.29□□□□□ -0.44
SND1-205ENST00000467238 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
SND1-205ENST00000467238 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.45
SND1-205ENST00000467238 KIAA0586Q9BVV6 1533 aa12.26□□□□□ -0.45
SND1-205ENST00000467238 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
SND1-205ENST00000467238 PLCG2P16885 1265 aa12.25□□□□□ -0.45
SND1-205ENST00000467238 NUBP1P53384 320 aa12.25□□□□□ -0.45
SND1-205ENST00000467238 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
SND1-205ENST00000467238 TMEM121BQ9BXQ6 578 aaPredicted RBP12.23□□□□□ -0.45
SND1-205ENST00000467238 CARMIL1Q5VZK9 1371 aa12.22□□□□□ -0.45
SND1-205ENST00000467238 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
SND1-205ENST00000467238 MAPKBP1O60336 1514 aa12.18□□□□□ -0.46
SND1-205ENST00000467238 IQGAP2Q13576 1575 aa12.18□□□□□ -0.46
SND1-205ENST00000467238 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
SND1-205ENST00000467238 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
SND1-205ENST00000467238 ABCC10Q5T3U5 1492 aa12.14□□□□□ -0.47
SND1-205ENST00000467238 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
SND1-205ENST00000467238 RAPGEF2Q9Y4G8 1499 aa12.13□□□□□ -0.47
SND1-205ENST00000467238 TSPOAP1O95153 1857 aa12.12□□□□□ -0.47
SND1-205ENST00000467238 PTPRGP23470 1445 aa12.11□□□□□ -0.47
SND1-205ENST00000467238 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
SND1-205ENST00000467238 CTTNBP2Q8WZ74 1663 aa12.11□□□□□ -0.47
SND1-205ENST00000467238 SNPHO15079 494 aa12.11□□□□□ -0.47
SND1-205ENST00000467238 DISP1Q96F81 1524 aa12.11□□□□□ -0.47
SND1-205ENST00000467238 TNIKQ9UKE5 1360 aa12.1□□□□□ -0.47
SND1-205ENST00000467238 POTEB3A0JP26 581 aa12.1□□□□□ -0.47
SND1-205ENST00000467238 POTEBQ6S5H4 581 aa12.1□□□□□ -0.47
SND1-205ENST00000467238 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.1□□□□□ -0.47
SND1-205ENST00000467238 UGGT2Q9NYU1 1516 aa12.1□□□□□ -0.47
SND1-205ENST00000467238 FAM69CQ0P6D2 419 aa12.09□□□□□ -0.47
SND1-205ENST00000467238 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
SND1-205ENST00000467238 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.48
SND1-205ENST00000467238 ABCC2Q92887 1545 aa12.07□□□□□ -0.48
SND1-205ENST00000467238 FAM212AQ96EL1 285 aa12.07□□□□□ -0.48
SND1-205ENST00000467238 KIAA0556O60303 1618 aa12.07□□□□□ -0.48
SND1-205ENST00000467238 UHRF1BP1LA0JNW5 1464 aa12.07□□□□□ -0.48
SND1-205ENST00000467238 TTBK1Q5TCY1 1321 aaPredicted RBP12.05□□□□□ -0.48
SND1-205ENST00000467238 UACAQ9BZF9 1416 aa12.04□□□□□ -0.48
SND1-205ENST00000467238 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
SND1-205ENST00000467238 PRXQ9BXM0 1461 aa12.02□□□□□ -0.48
SND1-205ENST00000467238 KDM6BO15054 1643 aa12.02□□□□□ -0.49
SND1-205ENST00000467238 EMP3P54852 163 aa12.02□□□□□ -0.49
SND1-205ENST00000467238 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
SND1-205ENST00000467238 PPRC1Q5VV67 1664 aaKnown RBP12.02□□□□□ -0.49
SND1-205ENST00000467238 ASXL2Q76L83 1435 aa12.02□□□□□ -0.49
SND1-205ENST00000467238 PLB1Q6P1J6 1458 aa12.02□□□□□ -0.49
SND1-205ENST00000467238 KDM5BQ9UGL1 1544 aa12.01□□□□□ -0.49
SND1-205ENST00000467238 GLI2P10070 1586 aa12.01□□□□□ -0.49
SND1-205ENST00000467238 ZCCHC11Q5TAX3 1644 aaKnown RBP12.01□□□□□ -0.49
SND1-205ENST00000467238 PYGBP11216 843 aa12□□□□□ -0.49
SND1-205ENST00000467238 PCDHB8Q9UN66 801 aa12□□□□□ -0.49
SND1-205ENST00000467238 HS3ST6Q96QI5 342 aa11.99□□□□□ -0.49
SND1-205ENST00000467238 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
SND1-205ENST00000467238 MAP3K4Q9Y6R4 1608 aa11.97□□□□□ -0.49
SND1-205ENST00000467238 EPRSP07814 1512 aaKnown RBP11.96□□□□□ -0.5
SND1-205ENST00000467238 FAM205CA6NFA0 338 aa11.95□□□□□ -0.5
SND1-205ENST00000467238 ABCA8O94911 1581 aa11.95□□□□□ -0.5
SND1-205ENST00000467238 FKBP8Q14318 412 aa11.94□□□□□ -0.5
SND1-205ENST00000467238 WDR7Q9Y4E6 1490 aa11.92□□□□□ -0.5
SND1-205ENST00000467238 C3orf67Q6ZVT6 689 aa11.91□□□□□ -0.5
SND1-205ENST00000467238 SAMD9Q5K651 1589 aa11.9□□□□□ -0.5
SND1-205ENST00000467238 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.5
SND1-205ENST00000467238 CFAP43Q8NDM7 1665 aa11.9□□□□□ -0.5
SND1-205ENST00000467238 TEX14Q8IWB6 1497 aa11.89□□□□□ -0.51
SND1-205ENST00000467238 EEA1Q15075 1411 aa11.88□□□□□ -0.51
SND1-205ENST00000467238 COL17A1Q9UMD9 1497 aaPredicted RBP11.88□□□□□ -0.51
SND1-205ENST00000467238 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
SND1-205ENST00000467238 KDM4FA0A1W2PPD8 638 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms